Gene

KWMTBOMO05755  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006805

Annotation

PREDICTED:_probable_cytosolic_iron-sulfur_protein_assembly_protein_Ciao1_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr10(-):9423219-9424724      View in EpiBrowser

Full name

Probable cytosolic iron-sulfur protein assembly protein Ciao1      

Location in the cell

Extracellular   Reliability : 2.902

CDS

ATGTTTAAACTGGAACTGATTCAAAATCTGGCCGGACACAAGGGTATAGTTTGGAATGTGTCGTGGCATCCACTTGGAAAATATTTTGCTTCTTGTGGTGAAGATAAAACTATAAAATTATGGAGTAAATATGGACAAGATTGGGCGATTAAGACTGTACTTGTCGATGGACATCAGAGAACAATTCGGGAAGTAGCCTGGTCACCCTGCGGTAATTTCCTCGCTTCAGCCAGTTTTGATGCGACTACTGCAATTTGGGATAAAAAAAGTGGTGAATTCCAATGCAATGCAACTTTAGAAGGCCATGAAAATGAAGTTAAAAGTGTAGCATGGTCACCTTCAGGCCATCTCCTGGCTACTTGTGGAAGAGATAAGTCTGTTTGGGTGTGGGAAGTAGCTGGAGAAGATGAATACGAGTGTGAAGCTGTACTTAATGCTCACAATCAGGATGTGAAGAAAGTTGCATGGCATCCTTCTCTAGATATCTTAGCATCAGCATCTTATGATAACACAGTAAAACTGTACCAAGAAGATCCTGTAGATAATGATTGGACTTGTGTTGCCACTCTACATTCGCATGAGTCAACAGTTTGGAGTTTGGCATTTGATAAAACTGGAGAAAGACTGGCGACATGTAGTGACGATAGAACTGTAAAAATTTGGAAAGAATACAAACCTGATAATCAAGAAGGTGTTGTGGTGACTGATCGAGAGGCAGTCTGGAAATGCATATGTACACTCTCTGGATTTCACACACGATGTATTTATGATATTGCTTGGTGTCATAAAACTGACCTCATAGCTACTGCTTGTGGAGATGATATCATTAGAATATTTAAAGAGAGTGAAGATTCTGATCCTAATGCTCCCACTTTTGAACTTCTTTGTACAAAGAAAAATGCTCATTCTCAAGATGTAAACTGTGTAGCTTGGAATCCTTCAGGAAATCAAGAACTGCTTTCTTGTAGTGATGATGGAGAAATAAAAATATGGAAGTTTACAGAAGCTTAA

Protein

MFKLELIQNLAGHKGIVWNVSWHPLGKYFASCGEDKTIKLWSKYGQDWAIKTVLVDGHQRTIREVAWSPCGNFLASASFDATTAIWDKKSGEFQCNATLEGHENEVKSVAWSPSGHLLATCGRDKSVWVWEVAGEDEYECEAVLNAHNQDVKKVAWHPSLDILASASYDNTVKLYQEDPVDNDWTCVATLHSHESTVWSLAFDKTGERLATCSDDRTVKIWKEYKPDNQEGVVVTDREAVWKCICTLSGFHTRCIYDIAWCHKTDLIATACGDDIIRIFKESEDSDPNAPTFELLCTKKNAHSQDVNCVAWNPSGNQELLSCSDDGEIKIWKFTEA

Description

Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

Similarity

Belongs to the WD repeat CIA1 family.

Keywords

Complete proteome   Repeat   WD repeat   Reference proteome   Ubl conjugation  

Feature

chain  Probable cytosolic iron-sulfur protein assembly protein Ciao1

Uniprot

H9JBB0   A0A2H1WFC0   A0A2W1BYB8   A0A2A4JPD6   A0A194QEC4   A0A194RBN8   + More
S4P9H0   A0A212FAL2   A0A0L7LPT1   A0A2J7PJW1   A0A2J7PJV4   A0A1W4XIA2   A0A2P8Y1F8   A0A1B6EMM9   A0A1Y1NKB5   A0A1B6CSN4   V5GDN6   A0A1B0GIX5   A0A1L8DH15   A0A088A0Q1   A0A1L8DGT6   B3NQR5   A0A0L7QX40   B4P7Q3   E2BZE1   Q7K1Y4   A0A154NZ44   A0A2A3ER86   A0A026WAD6   A0A0J9RE40   B4QFZ8   A0A1W4UJK3   A0A151WNZ3   B4HRQ6   U5EWL9   A0A034W9V2   B3MC74   A0A0J7KYZ7   A0A0M9AC22   W8ALT3   A0A0K8VQK3   A0A2K7P691   A0A023EQ17   B4GDM7   F4X188   Q292E8   Q17GR9   B4MY77   A0A3B0J0U9   A0A195DP98   K7ITJ4   A0A195CUR8   E2A1X3   A0A158NFI8   B4KTK4   A0A224XRQ3   A0A069DSA4   A0A182G554   A0A1S4EJG6   A0A0M3QV61   B0XAF3   A0A1Q3FAA4   B4JW81   A0A182K5Q2   A0A2S2QT66   A0A182PBJ3   A0A1S3DFT5   B4LJT7   A0A1A9W193   A0A1I8PVS8   A0A1B0BJK9   A0A182RMX1   A0A1A9YQA6   A0A182N196   A0A195BDN2   A0A2S2PJB7   E9IGK1   A0A182QKB6   A0A182LPT5   A0A182TX54   A0A182IAR5   Q7PS24   A0A182UPT2   R4G4S8   A0A1B0A0B6   A0A1J1IS69   A0A182XDT9   A0A1A9ULP0   D3TML8   J9K2Y2   A0A182IZB3   A0A232F013   A0A023F8F6   A0A084VX66   A0A182XXU0   U4UIV6   E0V9M7   A0A0N7Z9M2   A0A151JYK8   A0A182PFJ5  

Pubmed

19121390    28756777    26354079    23622113    22118469    26227816    + More
29403074    28004739    17994087    20798317    10731132    12537572    12537569    28953965    24508170    22936249    25348373    24495485    24945155    21719571    15632085    17510324    20075255    21347285    26334808    26483478    21282665    20966253    12364791    20353571    28648823    25474469    24438588    25244985    23537049    20566863    27129103   

EMBL

BABH01030957    ODYU01008299    SOQ51763.1    KZ149900    PZC78594.1    NWSH01000887    + More
PCG73679.1    KQ459302    KPJ01816.1    KQ460398    KPJ15022.1    GAIX01003759    JAA88801.1    AGBW02009454    OWR50767.1    JTDY01000364    KOB77528.1    NEVH01024944    PNF16625.1    PNF16622.1    PYGN01001056    PSN38024.1    GECZ01030589    JAS39180.1    GEZM01002934    JAV97055.1    GEDC01021035    JAS16263.1    GALX01000191    JAB68275.1    AJWK01017793    GFDF01008434    JAV05650.1    GFDF01008433    JAV05651.1    CH954179    KQ414705    KOC63188.1    CM000158    GL451589    EFN78951.1    AE013599    AY061388    KQ434783    KZC04946.1    KZ288201    PBC33551.1    KK107361    EZA51994.1    CM002911    KMY93854.1    CM000362    KQ982893    KYQ49584.1    CH480816    GANO01001356    JAB58515.1    GAKP01008042    JAC50910.1    CH902619    LBMM01001942    KMQ95504.1    KQ435687    KOX81400.1    GAMC01016830    JAB89725.1    GDHF01011150    JAI41164.1    GAPW01002440    JAC11158.1    CH479181    GL888528    EGI59760.1    CM000071    CH477256    CH963894    OUUW01000001    SPP74377.1    KQ980662    KYN14698.1    KQ977279    KYN04400.1    GL435845    EFN72567.1    ADTU01014525    CH933808    GFTR01005214    JAW11212.1    GBGD01002079    JAC86810.1    JXUM01043018    JXUM01043019    KQ561347    KXJ78870.1    CP012524    ALC41823.1    DS232580    GFDL01010544    JAV24501.1    CH916375    GGMS01011715    MBY80918.1    CH940648    JXJN01015446    KQ976514    KYM82290.1    GGMR01016921    MBY29540.1    GL763048    EFZ20289.1    AXCN02001237    APCN01001311    AAAB01008846    ACPB03016329    GAHY01001100    JAA76410.1    CVRI01000058    CRL02554.1    CCAG010009805    EZ422670    ADD18946.1    ABLF02021258    NNAY01001506    OXU23758.1    GBBI01001112    JAC17600.1    ATLV01017850    KE525195    KFB42560.1    KB632191    ERL89860.1    AAZO01000222    DS234995    EEB10096.1    GDKW01000155    JAI56440.1    KQ981494    KYN40944.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000235965    UP000192223    UP000245037    UP000092461    UP000005203    UP000008711    UP000053825    UP000002282    UP000008237    UP000000803    UP000076502    UP000242457    UP000053097    UP000000304    UP000192221    UP000075809    UP000001292    UP000007801    UP000036403    UP000053105    UP000008744    UP000007755    UP000001819    UP000008820    UP000007798    UP000268350    UP000078492    UP000002358    UP000078542    UP000000311    UP000005205    UP000009192    UP000069940    UP000249989    UP000079169    UP000092553    UP000002320    UP000001070    UP000075881    UP000075885    UP000008792    UP000091820    UP000095300    UP000092460    UP000075900    UP000092443    UP000075884    UP000078540    UP000075886    UP000075882    UP000075902    UP000075840    UP000007062    UP000075903    UP000015103    UP000092445    UP000183832    UP000076407    UP000078200    UP000092444    UP000007819    UP000075880    UP000215335    UP000030765    UP000076408    UP000030742    UP000009046    UP000078541   

PRIDE

H9JBB0    Q7K1Y4    B4KTK4    B4LJT7   

Pfam

PF00400   WD40        + More
PF01784   NIF3
PF12894   ANAPC4_WD40
PF00001   7tm_1

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR028608   CIAO1/Cia1       
IPR020472   G-protein_beta_WD-40_rep       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       
IPR036069   GTP_cyclohydrolase_I/Nif3_sf       
IPR002678   GTP_cyclohydrolase_I/Nif3       
IPR024977   Apc4_WD40_dom       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR007110   Ig-like_dom       

SUPFAM

SSF50978   SSF50978        + More
SSF102705   SSF102705       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JBB0   A0A2H1WFC0   A0A2W1BYB8   A0A2A4JPD6   A0A194QEC4   A0A194RBN8   + More
S4P9H0   A0A212FAL2   A0A0L7LPT1   A0A2J7PJW1   A0A2J7PJV4   A0A1W4XIA2   A0A2P8Y1F8   A0A1B6EMM9   A0A1Y1NKB5   A0A1B6CSN4   V5GDN6   A0A1B0GIX5   A0A1L8DH15   A0A088A0Q1   A0A1L8DGT6   B3NQR5   A0A0L7QX40   B4P7Q3   E2BZE1   Q7K1Y4   A0A154NZ44   A0A2A3ER86   A0A026WAD6   A0A0J9RE40   B4QFZ8   A0A1W4UJK3   A0A151WNZ3   B4HRQ6   U5EWL9   A0A034W9V2   B3MC74   A0A0J7KYZ7   A0A0M9AC22   W8ALT3   A0A0K8VQK3   A0A2K7P691   A0A023EQ17   B4GDM7   F4X188   Q292E8   Q17GR9   B4MY77   A0A3B0J0U9   A0A195DP98   K7ITJ4   A0A195CUR8   E2A1X3   A0A158NFI8   B4KTK4   A0A224XRQ3   A0A069DSA4   A0A182G554   A0A1S4EJG6   A0A0M3QV61   B0XAF3   A0A1Q3FAA4   B4JW81   A0A182K5Q2   A0A2S2QT66   A0A182PBJ3   A0A1S3DFT5   B4LJT7   A0A1A9W193   A0A1I8PVS8   A0A1B0BJK9   A0A182RMX1   A0A1A9YQA6   A0A182N196   A0A195BDN2   A0A2S2PJB7   E9IGK1   A0A182QKB6   A0A182LPT5   A0A182TX54   A0A182IAR5   Q7PS24   A0A182UPT2   R4G4S8   A0A1B0A0B6   A0A1J1IS69   A0A182XDT9   A0A1A9ULP0   D3TML8   J9K2Y2   A0A182IZB3   A0A232F013   A0A023F8F6   A0A084VX66   A0A182XXU0   U4UIV6   E0V9M7   A0A0N7Z9M2   A0A151JYK8   A0A182PFJ5  

PDB

3FM0     E-value=1.16943e-116,     Score=1073

KEGG

NA   

GO

GO:0097361   GO:0016226   GO:0004930   GO:0016021   GO:0016746   GO:0005515   GO:0006508   GO:0004672   GO:0005524   GO:0004568   GO:0006032   GO:0006541   GO:0016812   GO:0016597  

PANTHER

PTHR19920  

Length:

336

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.002

Exp number, first 60 AAs:

0.00051

Total prob of N-in:

0.00463

outside

1  -  336

 

 

Pi

251.002007

Theta

206.560249

Tajima's D

0.642532

CLR

0.370892

CSRT

0.560821958902055

Interpretation

Uncertain