Gene

KWMTBOMO05751

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr10(-):9317721-9318924      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.336

CDS

ATGCGTTCCCGGCCCCGTCACGTCACAGCCGGAGCTCCGCAAGGCTCCGCCCTCTCCCCGTTACTATTTAGTTTGTATATCAATGATATACCCCGATCTCCGGAGACCCATCTGGCGCTCTTCGCCGATGACACCGCCATCTACTACTCGTGTAGGAAGAAGGCGTTGCTTCATCGACGACTTCAGACCGCAGCTACCACCATGGGACAGTGGTTCCGGAAGTGGCGCATCGACATCAACCCCACGAAAAGCACAGCGGTGCTCTTCAGAAGGGGTCGCCCTCCGAACACCACGTTGAGCATCCCTCTCCCGTCTAGGCGCGCAAACACCTCCGCCGTTAGCCCCATCACTCTCTTTGGCCAGCCCATACCGTGGGCCCCGAAGGTCAAATATTTAGGCGTCACCCTCGACAGAAGGATGACATTCCGCCCCCACATCAAGACGGTACGCGACCGTGCCGCCTTCATTCTAGGACGTCTCTACCCGATGATATGTAGGCGAAGTAAAATGTCCCTTAGAAATAAGGTGACACTCTACAAAACTTGCATACGCCCCGTCATGACCTATGCAAGTGTAGTGTTCGCTCACGCGGCCCACACTCACTTAAAATCATTCCAAATTATTCAATCCCGTTTTTGCAGGATAGCCGTCGGAGCCCCGTGGTTCGTCAGGAACGTCGACCTCCATGACGACCTGGACTTAGAGTCCATCAGTAAGTATCTGCAGTCGGCGTCGATGCGCCACTTCGATAAAGCGGCACGACACGAGAACCCTCTCATCGTGGCTGCCGGTAACTACATTCCCGATCCTGCGGACAGAATGGAAAGCAGTCGACGTCGCCCAAAACACGTCATCTCGGATCCTCCCGATCCACTAACGGTGCTTTTAGGACTTCAAGCACCGGTCACCGTTCAGTCAGCCCTTCGTCGCAAGCGACGGGTTCACGAGTAA

Protein

MRSRPRHVTAGAPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFRRGRPPNTTLSIPLPSRRANTSAVSPITLFGQPIPWAPKVKYLGVTLDRRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAHTHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDPLTVLLGLQAPVTVQSALRRKRRVHE

Uniprot

K9N5J5   Q9XXW0   Q93137   Q9BPQ0   A0A194Q1H8   A0A0N0PA09   + More
A0A0N1PFV1   O96544   O96546   A0A1Y1NA23   V5GNF3   V5I850   V5GNJ2   A0A2S2QZC0   A0A139WA11   A0A2S2Q823   J9KKL3   X1WLB2   X1WMU5   A0A2S2PR14   X1WWC4   N6UKN2   X1WXU3   A0A139W8G9   J9LLC8   X1X2J8   N6U832   X1WL89   A0A224XF24   A0A087T1W0   A0A023EZE6   U4UTK6   X1WMF9   A0A2J7PF43   X1X664   A0A2J7QQP1   A0A2H8TWD9   X1X5Q5   A0A2J7RB54   A0A2J7RPU2   A0A069DZL8   A0A2J7Q0Q6   A0A2J7R6U1   A0A2J7R2E1   A0A2J7QUJ9   A0A087U2S8   A0A2J7RIW7   A0A2M4BD67   A0A2J7RRU8   A0A2J7QFL0   A0A2J7RKP3   A0A2J7RS77   A0A2J7R4B7   A0A2J7RM10   A0A2J7Q4F7   A0A2J7Q059   A0A2P8XC64   A0A2J7PMP6   A0A2J7QR37   A0A2J7PBY3   A0A2J7QY69   A0A2J7QLV3   A0A2J7PDS9   Q8T9X4   A0A2J7PVE7   Q8I7P8   X1X928   A0A2M4BDV6   A0A2A4K8E7   A0A1Y1M7E9   A0A1B6IXZ1   A0A1B6EH09   A0A2J7Q6J2   A0A1B6LG18   A0A2J7Q1Y9   A0A2S2NKN0   A0A2J7PMP9   A0A2A4K918   J9KCZ4   A0A2J7R8R8   A0A1B6LB29   J9KC83   A0A0A9Z4E6   A0A0C9R3N9   A0A2J7QEZ4   A0A2P8Z520   A0A2J7PDM0   A0A2J7Q5G9   A0A3N5Z7I3   A0A1Y1MAT4   A0A069DRZ5   A0A2M4BEZ9   A0A0A9YN51   A0A2M4BEF4   A0A2J7QAT1   Q07995   A0A1Y1KUU7   A0A0L0CBP5  

Pubmed

23652563    10333566    26354079    10380107    28004739    18362917    + More
19820115    23537049    25474469    26334808    29403074    25401762    30086797    8387152    26108605   

EMBL

KC165845    AFY12622.1    AB018558    BAA76304.1    U07847    AAA17752.1    + More
AB055391    BAB21761.1    KQ459580    KPI99178.1    KQ459259    KPJ02068.1    KQ459265    KPJ02064.1    AF081101    AAC72919.1    AF081103    AAC72921.1    GEZM01008457    JAV94772.1    GALX01005359    JAB63107.1    GALX01005300    JAB63166.1    GALX01005299    JAB63167.1    GGMS01013269    MBY82472.1    KQ971729    KYB24751.1    GGMS01004685    MBY73888.1    ABLF02029306    ABLF02029314    ABLF02060138    ABLF02042518    ABLF02057746    ABLF02014862    ABLF02014866    ABLF02061908    GGMR01019198    MBY31817.1    ABLF02003961    ABLF02059872    APGK01020047    KB740155    ENN81216.1    ABLF02008933    KQ973342    KXZ75569.1    ABLF02029215    ABLF02061876    APGK01045324    KB741033    ENN74747.1    ABLF02019349    ABLF02041900    GFTR01008038    JAW08388.1    KK113014    KFM59099.1    GBBI01004571    JAC14141.1    KB632361    ERL93526.1    ABLF02061874    NEVH01026085    PNF14941.1    ABLF02043973    NEVH01012084    PNF30905.1    GFXV01006424    MBW18229.1    ABLF02041993    NEVH01005938    PNF38077.1    NEVH01001355    PNF42855.1    GBGD01000415    JAC88474.1    NEVH01019964    PNF22161.1    NEVH01006754    PNF36554.1    NEVH01007838    PNF34986.1    NEVH01010546    PNF32261.1    KK117880    KFM71667.1    NEVH01003017    PNF40781.1    GGFJ01001858    MBW50999.1    NEVH01000598    PNF43535.1    NEVH01014858    PNF27387.1    NEVH01002716    PNF41415.1    NEVH01000280    PNF43672.1    NEVH01007443    PNF35684.1    NEVH01021586    NEVH01006600    NEVH01002584    PNF19589.1    PNF37419.1    PNF41868.1    NEVH01018383    PNF23463.1    NEVH01020071    PNF21969.1    PYGN01003315    PSN29591.1    NEVH01023962    PNF17612.1    NEVH01011985    PNF31054.1    NEVH01027074    PNF13841.1    NEVH01009134    PNF33528.1    NEVH01013241    PNF29579.1    NEVH01026154    PNF14491.1    AF456125    AAL57609.1    NEVH01020963    PNF20308.1    AY180919    AAN87272.1    ABLF02066620    GGFJ01001857    MBW50998.1    NWSH01000032    PCG80497.1    GEZM01038405    JAV81653.1    GECU01015898    JAS91808.1    GEDC01000118    JAS37180.1    NEVH01017470    PNF24199.1    GEBQ01017345    JAT22632.1    NEVH01019376    PNF22596.1    GGMR01004707    MBY17326.1    NEVH01023961    PNF17613.1    PCG80496.1    ABLF02008463    NEVH01006721    PNF37225.1    GEBQ01019253    JAT20724.1    ABLF02033757    GBHO01041571    GBHO01005400    GBHO01005396    JAG02033.1    JAG38204.1    JAG38208.1    GBYB01007412    JAG77179.1    NEVH01015305    NEVH01006671    PNF27154.1    PNF37357.1    PYGN01000192    PSN51582.1    NEVH01026386    PNF14434.1    NEVH01017559    PNF23833.1    RPOV01000134    RPJ78669.1    GEZM01039082    JAV81425.1    GBGD01002174    JAC86715.1    GGFJ01002257    MBW51398.1    GBHO01041572    GBHO01041570    GBHO01010553    JAG02032.1    JAG02034.1    JAG33051.1    GGFJ01002256    MBW51397.1    NEVH01016327    PNF25684.1    S59870    AAB26437.2    GEZM01074951    JAV64378.1    JRES01000644    KNC29657.1   

Proteomes

UP000053268    UP000007266    UP000007819    UP000019118    UP000054359    UP000030742    + More
UP000235965    UP000245037    UP000218220    UP000037069   

PRIDE

K9N5J5    Q9XXW0    Q93137    Q9BPQ0    Q8T9X4    Q8I7P8    + More

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF03372   Exo_endo_phos
PF07530   PRE_C2HC
PF10551   MULE

Interpro

IPR000477   RT_dom        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR006579   Pre_C2HC_dom       
IPR018289   MULE_transposase_dom       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10    

ProteinModelPortal

K9N5J5   Q9XXW0   Q93137   Q9BPQ0   A0A194Q1H8   A0A0N0PA09   + More
A0A0N1PFV1   O96544   O96546   A0A1Y1NA23   V5GNF3   V5I850   V5GNJ2   A0A2S2QZC0   A0A139WA11   A0A2S2Q823   J9KKL3   X1WLB2   X1WMU5   A0A2S2PR14   X1WWC4   N6UKN2   X1WXU3   A0A139W8G9   J9LLC8   X1X2J8   N6U832   X1WL89   A0A224XF24   A0A087T1W0   A0A023EZE6   U4UTK6   X1WMF9   A0A2J7PF43   X1X664   A0A2J7QQP1   A0A2H8TWD9   X1X5Q5   A0A2J7RB54   A0A2J7RPU2   A0A069DZL8   A0A2J7Q0Q6   A0A2J7R6U1   A0A2J7R2E1   A0A2J7QUJ9   A0A087U2S8   A0A2J7RIW7   A0A2M4BD67   A0A2J7RRU8   A0A2J7QFL0   A0A2J7RKP3   A0A2J7RS77   A0A2J7R4B7   A0A2J7RM10   A0A2J7Q4F7   A0A2J7Q059   A0A2P8XC64   A0A2J7PMP6   A0A2J7QR37   A0A2J7PBY3   A0A2J7QY69   A0A2J7QLV3   A0A2J7PDS9   Q8T9X4   A0A2J7PVE7   Q8I7P8   X1X928   A0A2M4BDV6   A0A2A4K8E7   A0A1Y1M7E9   A0A1B6IXZ1   A0A1B6EH09   A0A2J7Q6J2   A0A1B6LG18   A0A2J7Q1Y9   A0A2S2NKN0   A0A2J7PMP9   A0A2A4K918   J9KCZ4   A0A2J7R8R8   A0A1B6LB29   J9KC83   A0A0A9Z4E6   A0A0C9R3N9   A0A2J7QEZ4   A0A2P8Z520   A0A2J7PDM0   A0A2J7Q5G9   A0A3N5Z7I3   A0A1Y1MAT4   A0A069DRZ5   A0A2M4BEZ9   A0A0A9YN51   A0A2M4BEF4   A0A2J7QAT1   Q07995   A0A1Y1KUU7   A0A0L0CBP5  

KEGG

105842121    no KO assigned | (RefSeq) uncharacterized LOC105842121

GO

GO:0003964   GO:0004519   GO:0008270   GO:0003676  

Length:

316

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.80294

Exp number, first 60 AAs:

0.0833900000000001

Total prob of N-in:

0.26448

outside

1  -  316

 

 

Pi

72.67793

Theta

61.143088

Tajima's D

0.631017

CLR

0

CSRT

0.562521873906305

Interpretation

Uncertain