Gene

KWMTBOMO05748

Pre Gene Modal

BGIBMGA006883

Annotation

PREDICTED:_uncharacterized_protein_LOC101743725_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):9290205-9291310      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.395

CDS

ATGTGTTCGTTAGACAAAGTCTCTTCACCTAAATTTAAAAATATTTCATCTAATGCTAAGCAGTCGCCTGTACAAATAAAAGAGAGGCTCCGCAAGAACTATAGAAACAAGGTACAAAAATGCCGTGGAACGCTGCAAGATAAATTTCGCGAATTAACTTTTGAAAAGGATAATATGTGTAATGTATTAAAGGAACTATATAAGGAAATGATAGATTTCTCAGAGGATATTTTAGAAATTGAAGACAATATTTTACAGGAAATAAAAAATGAACTTATTCAGGAAGAGTTGGAGTGGTTGTTGGAGGAATACCAAAAAACACATATGGACGACAACATTGACTGGTCAAAAATTGAGCAAGATAATGTAATTGTTTGTCCAATTTGTCAAAGAGACAACTTTATGTCAGTTAATTCTTGTTTAAAATGTCCCAGTTGCAACGTTCAAATAAAGACATCAATGCAAACATCAGAAGTCAAAGAACATATCTTCAAATGCTTGGATAAACATAACTCTGTTTGTATATCGGATCCACAATTCACTGTAATTAAGGATACCAGTGATTGCCATATATATTTAATCTGTGAAACATGTAATGAAATGACATATATTTTGTAG

Protein

MCSLDKVSSPKFKNISSNAKQSPVQIKERLRKNYRNKVQKCRGTLQDKFRELTFEKDNMCNVLKELYKEMIDFSEDILEIEDNILQEIKNELIQEELEWLLEEYQKTHMDDNIDWSKIEQDNVIVCPICQRDNFMSVNSCLKCPSCNVQIKTSMQTSEVKEHIFKCLDKHNSVCISDPQFTVIKDTSDCHIYLICETCNEMTYIL

Uniprot

H9JBI8   A0A2A4J2Z4   A0A0L7LTE4   A0A2H1WJF4   A0A194QED4   A0A1E1W8L0   + More
A0A212EPR7   A0A194RB05   S4PPE8   A0A195BWG5   A0A158NCG5   F4WX09   A0A151IBZ0   A0A195F9B1   A0A151WN09   A0A195EE63   A0A2L2YK92   A0A2L2YM55   A0A310SVD7   V4AU19   E9IM50   G3VGY3   A0A0L7RJ78   A0A224XP19   A0A2S2QBG7   A0A0A9YWF4   C3YXN5   A0A1B6HJZ7   A0A0V0GCQ5   C1C3U2   A0A087U7G9   C4WWL7   A0A1B6GX45   R4G855   B1H156   V9L8F3   A0A1S3K944   E4WZK9   A0A1W0A007  

Pubmed

19121390    26227816    26354079    22118469    23622113    21347285    + More
21719571    26561354    23254933    21282665    21709235    25401762    26823975    18563158    20431018    24402279    21097902    25527045   

EMBL

BABH01030943    NWSH01003563    PCG66106.1    JTDY01000127    KOB78707.1    ODYU01009012    + More
SOQ53096.1    KQ459302    KPJ01826.1    GDQN01007769    JAT83285.1    AGBW02013402    OWR43490.1    KQ460398    KPJ15033.1    GAIX01000292    JAA92268.1    KQ976396    KYM92927.1    ADTU01011883    GL888417    EGI61252.1    KQ978076    KYM97238.1    KQ981727    KYN37028.1    KQ982934    KYQ49181.1    KQ979074    KYN23092.1    IAAA01032229    LAA08538.1    IAAA01032230    LAA08540.1    KQ759817    OAD62779.1    KB201305    ESO97271.1    GL764129    EFZ18522.1    AEFK01141428    KQ414582    KOC70884.1    GFTR01003592    JAW12834.1    GGMS01005874    MBY75077.1    GBHO01009712    GBHO01009709    GDHC01010395    JAG33892.1    JAG33895.1    JAQ08234.1    GG666563    EEN54844.1    GECU01032724    GECU01008311    JAS74982.1    JAS99395.1    GECL01000268    JAP05856.1    BT081521    ACO51652.1    KK118574    KFM73308.1    ABLF02013769    AK342139    BAH72287.1    GECZ01002796    JAS66973.1    ACPB03012369    GAHY01001562    JAA75948.1    AAMC01063017    BC160480    AAI60480.1    JW875499    AFP08016.1    FN653019    FN654801    CBY22605.1    CBY36572.1    JNBS01000821    OQS03622.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000007151    UP000053240    + More
UP000078540    UP000005205    UP000007755    UP000078542    UP000078541    UP000075809    UP000078492    UP000030746    UP000007648    UP000053825    UP000001554    UP000054359    UP000007819    UP000015103    UP000008143    UP000085678    UP000243217   

PRIDE

H9JBI8   

Pfam

PF14768   RPA_interact_C        + More
PF14766   RPA_interact_N
PF14767   RPA_interact_M

Interpro

IPR028159   RPA_interact_C_dom        + More
IPR028156   RIP       
IPR013083   Znf_RING/FYVE/PHD       
IPR028158   RPA_interact_N_dom       
IPR028155   RPA_interact_central       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9JBI8   A0A2A4J2Z4   A0A0L7LTE4   A0A2H1WJF4   A0A194QED4   A0A1E1W8L0   + More
A0A212EPR7   A0A194RB05   S4PPE8   A0A195BWG5   A0A158NCG5   F4WX09   A0A151IBZ0   A0A195F9B1   A0A151WN09   A0A195EE63   A0A2L2YK92   A0A2L2YM55   A0A310SVD7   V4AU19   E9IM50   G3VGY3   A0A0L7RJ78   A0A224XP19   A0A2S2QBG7   A0A0A9YWF4   C3YXN5   A0A1B6HJZ7   A0A0V0GCQ5   C1C3U2   A0A087U7G9   C4WWL7   A0A1B6GX45   R4G855   B1H156   V9L8F3   A0A1S3K944   E4WZK9   A0A1W0A007  

KEGG

101743725    no KO assigned | (RefSeq) uncharacterized LOC101743725

GO

PANTHER

PTHR31742  

Length:

205

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05532

outside

1  -  205

 

 

Pi

210.124936

Theta

190.794108

Tajima's D

0.280444

CLR

0.426076

CSRT

0.447727613619319

Interpretation

Possibly Positive selection