Gene

KWMTBOMO05746

Pre Gene Modal

BGIBMGA006882

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_C_member_Sur_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr10(+):9240955-9266243      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.251

CDS

ATGGAGGCAGTTTGTGGTCAAGGTGATAGAAGCTGTGAGATGCGAGCATTGAATGCCGCACTACATTCACTGCACCTGTACTGCGCTACAATCACTGCGGGATTAATGTACTGTTGTTCCACCACGCACAAACATTACAGATATAAGAAGAACTGGAGAGCTCAAAATGTACGAGGAGTGGCCAGTCTTGCTCTGTTTGGTATCTGGTGCTGTGGGGCAGCGGCGGCACTTCTACGTCGCACGGATACTGTACGATTAGTCTCGGCCCTCATGGCACCTCTTGCCTGGATCGCAGCGGCCTGCTTCCACGTCGCTCTATGGAATAGACAATCCTCAGCGCCTATATTGTACTTGGCGATATATTGGTCACTCTCAGCCATATCAGCCGCTTCCATTCTTTGGCAGCACATCCGTGTCGGCGCTGAAGTCAACCATATAGAATTATATATTCAGGGTGCCTCATTGCTGCTTTCTTTAACGATATCTGCCGTGGACTGCGCGTGCTTTTACGAAGTGGTAACAAAACATTTTAGTCATCGCGACAAGACGACGAACAGCTCAAGCAAAGTCTCTTACAAACACAATAGCTCTCATTTTTATTCCAAAATCTCGTTTTATTGGATAAACGGTCTGTTATACAAAGGGTATGAATCTCCATTAGAGATGGAGGATTTAGGAGAATTACCAGATAAAGAAAAATCAGTCAAATATTACAAAAAAATCCACAGCATTTATAAAAGCGTTGAGAAAACAAAGTATAACGATGGCCCTAGTATATGGACATGTTACCTATGTAGAGTGTGGCCAAATTTTTACATTGGTGGTATTTTAAAACTTTTAGGTGACTTAATAGGTTTAGTTCCACCATTGGGGCTGGCTTTCATAATTCAGTTTATTGAAAGTCCGATTAGTAATGAACATAACAGTAACGAAGCACATGTAACTTTAAGAGAATTTATCGGTAATGGCTACGTCATGTTATTAGTAATTACTTTGGCTTTGATTTATCAGGCCTTACTCTCTCAAAATTCGACGCATTTGGTAACAGTGGAAGGTGCCAGATTAAAGACTGCTTTACAAGCTATGATTTATGACAAATGTATGCGTATAGCATCTTGGACGCCATCGGAGTCAAATTTAGACGAAGATTCCCCTTTGCTGATGAATTCGGACGATGAGAGCAATACGCGATCTGGTCTCATAACGAATTTAGTTTCACAAGACACGTACAATATTATGTCTTGCGTTTGGATTTGTCATTACATATGGGCTATACCGCTTAAGGTGGCTGTGATACTATATCTATTGTACATGAAATTAGGCGTAAGCGCAATTATCGGAGCAGTAGCAAGCGTGTTAGTGATCACACCCTTGCAATTTCTTGTAGGAAAGAAACTTTCAGATAACTCTAAAGATATTTCTAAATGTACGGATCACAGAATTTCCAAAATGACCGAAATATTGCAAGGAATAAATGTAATTAAACTCTACGTATGGGAAGATTTGTTTAAAGAAAAAATATTACAACTTAGAGAAGTCGAACTGAAACTGCTAAATAAAGATTCATTATACTGGAGTTTTTTGACTTTTTCGACTCAAGTCTCTACAATCTTAATCACAGTTATTACATTCACTGTATATTTTTTCATAGAAGAAGGAACCGGCTTAACCGCGATGAACGTATTCGCTGGCTTAGCCTTCTTTAATCAGCTTTCCGTTCCATTGCTTATTTTGCCAGTCACTGTCCTCATGATAATTCAAGCTATGGTGAGCACAAGACGAATCAAAGATTTTTTGGATCTTCCCGAATCGAACAATGTCGGAAACGAAATTACTGAATATGAAGAGTTATTGAACAAACCTAATGTCCCTTGTAATGACAATACACATCAGAATGACGTGCCATCTCACGATGTAATGGCCAATAAAGATGAGATGTGTGAAATTGAGTTCGCTGAGCAATTATCAAATGAGTCACACGTTAATAAATCGGAATCCTCTCAATTGGTCACATTTCGAAATGCGGCGTTCACGTGGGGTGTGAAAGATGATCTATTGGAAGTTGGCGATCTTGAAATTCCTACAGGGAAACTAATTATGGTTGTCGGAGGCACAAGTGCTGGAAAATCATCATTCTTGTCTGCTTTAATTGGAGAAATGTATCTTGAAAGAGGAGATGTGTTATATAATCGAAACAGTTCGAAGTGGTATGCCGGTCAGCCTCCGTGGTTGCTAGAGGCTTCAGTTCGCGATAACATAATAATGGGTCATTCTTGGTGTCAGAAAAATTATGCACGTGTTCTACGCGCCACAGGTCTGCGGCCAGACTTACAACTTTTACCAGAAGGCGACGCAACCCGCCTGGGCAGCCACGGTACTCCCTTATCCGGCGGTCAACGCATTCGCGTGAGCATTGCTCGAGCATTATACTCCAAGGCACAACTGCTGGCTTTAGACGAGCCGCTAGCTGCGCTCGACGCTGCACTGGCACGTCATGTGGTAGCGCGAGGACTGGTGCCGGCTGTCCGCGCAGGGCGAACCATTGTCCTCGCAACTAACAGACTGGAACTACTACACTATGCTGACTTGATTATCGCAATGGATAATGGACGTGTGAGCGGATACGGTCGAGTGTCCAGCGCCAGTAACGACAGCTACCTATCGCGCTGGGTGCAGCTTGCAAGCGAAGCTCGTGCAGCTGCAGCGCGAGGATGTGCTGGTCCTCCTGACGGAACTGCACGGGAACGGGCGCGGCTCGTGCGAGTGCTCAGCCGGGCTAAATTCCAAAGATGCGCATCAGAGGATACTGCAATCGGCATAACAGAGGCAGCAGGGGCGCATTTGTTAGCAGAGGTACCGATGTACACTGGCGGTAGTTGGCGTAGAGTAGTGCAGCAACAGAGACCGCCCCTCATGAGGCAGTTCTCATCACCGCCACCATCATCTATATGGCGTCGTGAAATACGTCGTACAGTCAGTGCGGATGAATCAAACACTACACTACAACGAGAAGTCAGTCTTCTTCGACGCTGGCTACGACCACAAGGAAACCGAACTCTTAGGAGATGGACCCCGAGAAATCTAAGACGTTTAATCAGTTCAGAATCCGATACACCTGCCCCGGACACTAATGGAATTAATGAAGAATCCTTAGTGGAGACCACTTACAGCACAGTTAGCATAAACGGAGGGGATACAAATGTCGGAATGATTAATGACGAATCTTCACTAGATAAGAGTCAATCTTGGAATGACGTCAGTGAGTGCAAGATATGGCTAGAGTATGGTCTCGCGTGCGGTTGGTGGGGTATCGCCTTCTGGGTAGCAGCAGCCACAGCGCAAGGCTTAGCGCTGGCAGCCGACTACTGGTTGATGTGCCTCACTAATGACAATGCCACTGAAAACTTTTCTGATGATCAGTTGTGGAGCAGTGTCCGCAAGTACGGGTTGTGGTGCGCTGCGGGGGCGGGGGCGGCGGGCGCGGCTCAGGCGGCGTGCGCATGCGCGGGGGCAGGAGCGCGGCGAGTGCTGCATGAGCGCCTGCTGCACGCCGCGCTCTACGCCAGCCCCCACCACCACCACACTACGCCCACCGGGACCACGCTCCATCGCTTCTCCGCTGACGTTCTATTGCTAGACAAAAAATTACCGACAGCCATAAGTCGGTGGACTCAGTTAGCTCTGCTATGTGCTGCGGCTATGCTTGTCAATGCTGTAGTCGCGCCCTGGAGCCTGACAGCACTCATACCGGCATTCTTGTGTTACCTCTGCCTACAATCTGTTTATTTACGTAATTCTAGGGAGTTGCAGCAAGTGGAAGGACAAAGCGCCGGAAGAGTGGTGTCTCTTTGCAGAGAGACGTGTGCTGGAGGTTCTACTATACGAGCCAGCCGACTACAGACCCGCATGCGGACAGACTTCCTTCGACGTCTCGACTATAATCACAACGCTCTGCTGCTCCTCAATACTGCTAACCGGTGGCTTGGATTGTCTCTGGATCTTGTTGGCGCTGCGAGTGTTTGCGTGTCCCTGTGCGTGTGCATGTACAGCGGCAGTAGAGGCGCGGTCGCGGGACTAGCGGGCGCGTACTCGCTGCTCCTGCCCGCCTATCTCGCTCATCTTGCCAAATGCCGCGCCGACCTCGACCAGCAACTCGCCGCGCTGCATCGTATACATCGTGACACCAATGTACCCCGCGAAGATTATAGAGAGCATTGCTCTATTCCTGCAAATTGGCAAAGAAGCGGAAAAATTGAATTTCAAAATGTCAGCGTGCAGCACGAACCTAACTCGCAGAATATTTTGAACAAAATCAATATATCTATAGCTCCCGGTGAGAAGGTAGCAATATGCGGCAGGAGTGGTAGCGGCAAGTCTACGTTATTAATGACGTGTGTTGGAGCAACCAGTATTGCCGAAGGACGAGTGCTTATCGACGGGCAGGACGTGTCGCGCGTGCCGCTGCGGGCGTTACGTCACCGCGTGGTCGTCCTGCCGCAAGAGCCTGCGATGTTCTCGGGCACGCTGCGAGAAAACCTCGACCCGCTCGCCGTGCACACTGACGAAGAAATATGGCACAGTCTCAAAGTTGTCGGATTATATGATTTCGTCAGTGCTCAATCGGCTGGTTTGGAGTGCAGTATAGCGGGGCGCGGCGGGTGGAGCGCGGGACGGGCGGCGCGTGCGTGTGCGGCCCGCGCGGCGCTGCACGCCCGTTTAGCGGCCGCCCTGTTGCTGGACGAGCCCGCCGCCGCACTCGACGCCGCAGCCGAGCGAGCACTTCTCGCCGCAATGGCGCGCATCGCACCCGACACCACCATCATCACCGTCGCACATCGCATATCGTCAGTGCGCGGGTACGACCGCGCCGTCGTACTGGAGGAGGGTCGCGTGGTGGAGCAGGGCGAGGTGGGCCCGCTGCTGTCGCGGCCGGTCTCACGCCTCGCCCGCATGCTCGCCGCCGCGCACACGCACCTGATCGCCGTGTGTGGAGCGAAGGCGGACCGGAACTGA

Protein

MEAVCGQGDRSCEMRALNAALHSLHLYCATITAGLMYCCSTTHKHYRYKKNWRAQNVRGVASLALFGIWCCGAAAALLRRTDTVRLVSALMAPLAWIAAACFHVALWNRQSSAPILYLAIYWSLSAISAASILWQHIRVGAEVNHIELYIQGASLLLSLTISAVDCACFYEVVTKHFSHRDKTTNSSSKVSYKHNSSHFYSKISFYWINGLLYKGYESPLEMEDLGELPDKEKSVKYYKKIHSIYKSVEKTKYNDGPSIWTCYLCRVWPNFYIGGILKLLGDLIGLVPPLGLAFIIQFIESPISNEHNSNEAHVTLREFIGNGYVMLLVITLALIYQALLSQNSTHLVTVEGARLKTALQAMIYDKCMRIASWTPSESNLDEDSPLLMNSDDESNTRSGLITNLVSQDTYNIMSCVWICHYIWAIPLKVAVILYLLYMKLGVSAIIGAVASVLVITPLQFLVGKKLSDNSKDISKCTDHRISKMTEILQGINVIKLYVWEDLFKEKILQLREVELKLLNKDSLYWSFLTFSTQVSTILITVITFTVYFFIEEGTGLTAMNVFAGLAFFNQLSVPLLILPVTVLMIIQAMVSTRRIKDFLDLPESNNVGNEITEYEELLNKPNVPCNDNTHQNDVPSHDVMANKDEMCEIEFAEQLSNESHVNKSESSQLVTFRNAAFTWGVKDDLLEVGDLEIPTGKLIMVVGGTSAGKSSFLSALIGEMYLERGDVLYNRNSSKWYAGQPPWLLEASVRDNIIMGHSWCQKNYARVLRATGLRPDLQLLPEGDATRLGSHGTPLSGGQRIRVSIARALYSKAQLLALDEPLAALDAALARHVVARGLVPAVRAGRTIVLATNRLELLHYADLIIAMDNGRVSGYGRVSSASNDSYLSRWVQLASEARAAAARGCAGPPDGTARERARLVRVLSRAKFQRCASEDTAIGITEAAGAHLLAEVPMYTGGSWRRVVQQQRPPLMRQFSSPPPSSIWRREIRRTVSADESNTTLQREVSLLRRWLRPQGNRTLRRWTPRNLRRLISSESDTPAPDTNGINEESLVETTYSTVSINGGDTNVGMINDESSLDKSQSWNDVSECKIWLEYGLACGWWGIAFWVAAATAQGLALAADYWLMCLTNDNATENFSDDQLWSSVRKYGLWCAAGAGAAGAAQAACACAGAGARRVLHERLLHAALYASPHHHHTTPTGTTLHRFSADVLLLDKKLPTAISRWTQLALLCAAAMLVNAVVAPWSLTALIPAFLCYLCLQSVYLRNSRELQQVEGQSAGRVVSLCRETCAGGSTIRASRLQTRMRTDFLRRLDYNHNALLLLNTANRWLGLSLDLVGAASVCVSLCVCMYSGSRGAVAGLAGAYSLLLPAYLAHLAKCRADLDQQLAALHRIHRDTNVPREDYREHCSIPANWQRSGKIEFQNVSVQHEPNSQNILNKINISIAPGEKVAICGRSGSGKSTLLMTCVGATSIAEGRVLIDGQDVSRVPLRALRHRVVVLPQEPAMFSGTLRENLDPLAVHTDEEIWHSLKVVGLYDFVSAQSAGLECSIAGRGGWSAGRAARACAARAALHARLAAALLLDEPAAALDAAAERALLAAMARIAPDTTIITVAHRISSVRGYDRAVVLEEGRVVEQGEVGPLLSRPVSRLARMLAAAHTHLIAVCGAKADRN

Uniprot

A0A2H1WKW6   A0A2A4J3U0   A0A194Q8H7   A0A0C9PT85   E2C386   A0A3L8DG37   + More
A0A026WVS7   E2AD78   A0A088AVK0   E9IM46   A0A2A3ER30   A0A146M0J9   A0A2P8Y1S9   A0A0N0BCC6   A0A1B6G880   A0A151WMZ1   A0A151IBY1   A0A151JRA0   A0A195BWB6   A0A158NCU7   A0A1B6F7C2   A0A2H8TRM2   A0A2S2R243   A0A1B6GIW2   F4WX06   J9JX53   A0A2S2PLT0   A0A1E1XCR9  

Pubmed

26354079    20798317    30249741    24508170    21282665    26823975    + More
29403074    21347285    21719571    28503490   

EMBL

ODYU01009012    SOQ53094.1    NWSH01003563    PCG66110.1    KQ459302    KPJ01828.1    + More
GBYB01004583    JAG74350.1    GL452292    EFN77618.1    QOIP01000008    RLU19415.1    KK107088    EZA59771.1    GL438684    EFN68626.1    GL764129    EFZ18436.1    KZ288198    PBC33676.1    GDHC01005285    JAQ13344.1    PYGN01001043    PSN38190.1    KQ435922    KOX68441.1    GECZ01011150    JAS58619.1    KQ982934    KYQ49178.1    KQ978076    KYM97235.1    KQ978619    KYN29755.1    KQ976396    KYM92924.1    ADTU01011879    ADTU01011880    ADTU01011881    GECZ01023725    JAS46044.1    GFXV01005038    MBW16843.1    GGMS01014904    MBY84107.1    GECZ01007393    JAS62376.1    GL888417    EGI61249.1    ABLF02035352    GGMR01017791    MBY30410.1    GFAC01002146    JAT97042.1   

Proteomes

UP000218220    UP000053268    UP000008237    UP000279307    UP000053097    UP000000311    + More
UP000005203    UP000242457    UP000245037    UP000053105    UP000075809    UP000078542    UP000078492    UP000078540    UP000005205    UP000007755    UP000007819   

Pfam

PF00664   ABC_membrane        + More
PF00005   ABC_tran
PF00027   cNMP_binding
PF00069   Pkinase

Interpro

IPR003439   ABC_transporter-like        + More
IPR036640   ABC1_TM_sf       
IPR011527   ABC1_TM_dom       
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       
IPR018488   cNMP-bd_CS       
IPR000595   cNMP-bd_dom       
IPR035014   STKc_cGK       
IPR000719   Prot_kinase_dom       
IPR000961   AGC-kinase_C       
IPR018490   cNMP-bd-like       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR014710   RmlC-like_jellyroll       
IPR017871   ABC_transporter_CS       
IPR002374   cGMP_dep_kinase       
IPR017441   Protein_kinase_ATP_BS       

SUPFAM

SSF90123   SSF90123        + More
SSF52540   SSF52540       
SSF51206   SSF51206       
SSF56112   SSF56112       

Gene 3D

1.20.1560.10     2.60.120.10    

CDD

cd05572  STKc_cGK
cd00038  CAP_ED

ProteinModelPortal

A0A2H1WKW6   A0A2A4J3U0   A0A194Q8H7   A0A0C9PT85   E2C386   A0A3L8DG37   + More
A0A026WVS7   E2AD78   A0A088AVK0   E9IM46   A0A2A3ER30   A0A146M0J9   A0A2P8Y1S9   A0A0N0BCC6   A0A1B6G880   A0A151WMZ1   A0A151IBY1   A0A151JRA0   A0A195BWB6   A0A158NCU7   A0A1B6F7C2   A0A2H8TRM2   A0A2S2R243   A0A1B6GIW2   F4WX06   J9JX53   A0A2S2PLT0   A0A1E1XCR9  

PDB

6C3P     E-value=2.88839e-65,     Score=637

KEGG

101736039    K05033 ATP-binding cassette subfamily C (CFTR/MRP) member 9 | (RefSeq) ATP-binding cassette sub-fami

PATHWAY

02010    ABC transporters - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0042626   GO:0016021   GO:0004692   GO:0006810   GO:0016887   GO:0004568   GO:0006032   GO:0006541   GO:0016812   GO:0016597   GO:0055085  

Length:

1670

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

313.94773

Exp number, first 60 AAs:

20.92026

Total prob of N-in:

0.16276

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  39

inside

40  -  58

TMhelix

59  -  76

outside

77  -  85

TMhelix

86  -  108

inside

109  -  114

TMhelix

115  -  137

outside

138  -  151

TMhelix

152  -  174

inside

175  -  318

TMhelix

319  -  341

outside

342  -  415

TMhelix

416  -  438

inside

439  -  439

TMhelix

440  -  462

outside

463  -  526

TMhelix

527  -  549

inside

550  -  560

TMhelix

561  -  583

outside

584  -  1670

 

 

Pi

220.57997

Theta

181.411935

Tajima's D

0.449946

CLR

0.221259

CSRT

0.500574971251437

Interpretation

Uncertain