Silkworm Genome Informatics Database

Gene

KWMTBOMO05738

Annotation

PREDICTED:_pigment-dispersing_factor_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr10(+):9064525-9066051 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.115

CDS

ATGAAATCTGTGACATTATTGTTTTTTTTGTTTTTAATGGAAGCATCTACTTATAGTGTTGCTAACAGCGAAGCTAAAATCAAATTAAACAGAAAAGTATCGGAATCTTCCTACGGATCTGATGAACAGTACATTCGTCAAATACACTCACTGGTCAATGCGTACAGAGAAGATAACAGCATGTTGGGCGAAAATTTCATTATTGAAACAAAAGCTTTGATAGACACGAAATATAGAACATGGAAAAGAAATGCTGATCTCATCAACTCGCTACTGGCCTTGCCTAAAGACATGAATGACGCCGGCCGTTAG

Protein

MKSVTLLFFLFLMEASTYSVANSEAKIKLNRKVSESSYGSDEQYIRQIHSLVNAYREDNSMLGENFIIETKALIDTKYRTWKRNADLINSLLALPKDMNDAGR

Uniprot

B3IUD7 A0A385H8Z4 A0A0S1U1Q4 A0A212EWD1 A0A023EBP7 A0A0A0VBN9 + More
B0WCZ1 T1DL60 A0A1Q3FSW2 A0A2P8Z821

Pubmed

30171635 22118469 24945155 29403074

EMBL

AB298933 BAG50372.1 MH028121 AXY04290.1 KT005987 RSAL01000254 + More
ALM30338.1 RVE43438.1 AGBW02012023 OWR45786.1 GAPW01006695 JAC06903.1 KM355978 AIW65408.1 DS231892 EDS44066.1 GAMD01000601 JAB00990.1 GFDL01004407 JAV30638.1 PYGN01000153 PSN52637.1

Proteomes

UP000283053 UP000007151 UP000002320 UP000245037

PRIDE

B3IUD7

Pfam

PF06324 Pigment_DH

Interpro

IPR009396 Pigment_DH

ProteinModelPortal

B3IUD7 A0A385H8Z4 A0A0S1U1Q4 A0A212EWD1 A0A023EBP7 A0A0A0VBN9 + More
B0WCZ1 T1DL60 A0A1Q3FSW2 A0A2P8Z821

KEGG

692465 no KO assigned | (RefSeq) PDF; pigment-dispersing factor

GO

GO:0009416 GO:0005179 GO:0005576 GO:0008061 GO:0004553 GO:0004568 GO:0006032 GO:0006541 GO:0016812 GO:0016597

SignalP

Position: 1 - 19, Likelihood: 0.991724

Length:

103

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.57221

Exp number, first 60 AAs:

3.57221

Total prob of N-in:

0.04114

outside

1 - 103

Pi

336.773302

Theta

231.017911

Tajima's D

1.439834

CLR

0

CSRT

0.771761411929404

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics