SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05736  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006875
Annotation
putative_acetyltransferase_ACT20_[Spodoptera_litura]
Location in the cell
Cytoplasmic   Reliability : 1.372 Mitochondrial   Reliability : 1.924
 

Sequence

CDS
ATGGGGAAATATTTATTACGCCAAGCTATTTTGTTCTCTAAGGTGGTTGAATTAAAACCGACTTCATCACTATTTGGAAATATTAGTAGAAAACTACACACTGATGAGATTCCTGTTAAAGAAATCGAAATACCAGTGCAATGGGGTCGCCTATCGGCAAAATTATGGGGTACAGACCAACGCAGACCGATATTAGCTTTACATGGATGGCAAGATAATGCAGGCACCTGGGATCCAATTGCGCCTATGTTATGTAAAAACCGCTCCATATTAGCCCTTGATTTTCCTGGTCATGGATATTCTAGCTGGATCCCTCCAGGTATGCAGTACTATTCTTGGGAACTACCACGACTCATCATGTACCTGAAAAACTATTTTAAATGGGATAAGGTTTCATTATTGTGTCACTCTATGGGCTCTATAGCGGGTATGCGTTACGCGAGCGTGTGCCCTGACGATGTCGACATTTATATTGCAATAGACAGCCTTATTTACGACGACTACGATTTACATTTAGTGGTTGACAAATATCCAAAAATTTTGGAGAAGAGCCTTTTCGCACAAACACGCTTAGAAGAAGAACCACCGTCTTACACGTTAGAAGAAATAACAAAGCTATGGCACTTAGGAACAACAAAGTCAGTTGCGCTTGAAAGTGTACAGCATTTGTTGAAGAGAGGGGCAAAAGAATCAAAACGCTATCCAAATAAATACTATATCTCGCGAGATGCCAGATTGAAGTACACGTTGTTTAATCCTGAAAGCAAAAAATTTGTAGAGGCTCTGATTAAGAGACTGAAAGCTCCAACACTGTACATCAAAGCGATAGACTCGCCTTATGCGTCAGATGCTTTTTCTGTGGAAATGCGGGAAATAATCGAAACAAACAATGATAAATTCGAGTGTCACTTTATCCCTGGCACGCATCACGTACACCTCAATAGTCCAGAAACAGTGGCACCTTTAATACAATCTTTTCTACAAAAATATAATGTACCAATTTAA
Protein
MGKYLLRQAILFSKVVELKPTSSLFGNISRKLHTDEIPVKEIEIPVQWGRLSAKLWGTDQRRPILALHGWQDNAGTWDPIAPMLCKNRSILALDFPGHGYSSWIPPGMQYYSWELPRLIMYLKNYFKWDKVSLLCHSMGSIAGMRYASVCPDDVDIYIAIDSLIYDDYDLHLVVDKYPKILEKSLFAQTRLEEEPPSYTLEEITKLWHLGTTKSVALESVQHLLKRGAKESKRYPNKYYISRDARLKYTLFNPESKKFVEALIKRLKAPTLYIKAIDSPYASDAFSVEMREIIETNNDKFECHFIPGTHHVHLNSPETVAPLIQSFLQKYNVPI

Summary

Similarity
Belongs to the glycosyl hydrolase 18 family.
EMBL
BABH01030923    RSAL01000254    RVE43441.1    ODYU01008525    SOQ52201.1    KT261727    + More
ALJ30267.1    KU755501    ARD71211.1    MF706181    ATJ44608.1    NWSH01000130    PCG79258.1    MF687654    ATJ44580.1    KJ579237    AIN34713.1    AGBW02012023    OWR45783.1    KQ460398    KPJ15050.1    PCG79259.1    KQ459606    KPI91435.1    SOQ52200.1    JTDY01000312    KOB77748.1    JRES01001262    KNC24104.1    CH379069    EAL29818.1    CH479212    EDW33219.1    CM000159    CH891695    EDW95059.1    EDW99675.1    CM000363    CM002912    EDX11363.1    KMZ00972.1    GGFK01011624    MBW44945.1    GGFJ01006913    MBW56054.1    CH480826    EDW44342.1    OUUW01000009    SPP85322.1    ATLV01015034    KE524999    KFB39975.1    GGFJ01006915    MBW56056.1    GGFJ01006916    MBW56057.1    GGFJ01006914    MBW56055.1    GGFK01010494    MBW43815.1    CH954178    EDV52631.1    CH902618    EDV39954.1    AE014296    AGB94843.1    AXCM01003253    AY122265    AAF51706.1    AAM52777.1    GANO01002302    JAB57569.1    GFDL01002508    JAV32537.1    GBXI01015949    GBXI01015558    GBXI01015478    GBXI01000648    JAC98342.1    JAC98733.1    JAC98813.1    JAD13644.1    CH933809    EDW18575.1    CH964101    EDW79419.1    GAMD01000886    JAB00705.1    KFB39973.1    CH477306    EAT44107.1    AXCN02000850    ADMH02002093    ETN59280.1    AAAB01008797    EAA03646.2    APCN01004115    KFB39974.1    JXUM01098527    KQ564427    KXJ72298.1    JXUM01048556    KQ561567    KXJ78144.1    GGFM01007345    MBW28096.1    EDO64828.1    GDHF01022437    GDHF01012634    JAI29877.1    JAI39680.1    DS231825    EDS28163.1    GDHF01008659    GDHF01004535    JAI43655.1    JAI47779.1    CVRI01000006    CRK88376.1    ETN59282.1    CH940647    EDW69508.1    GGFK01008927    MBW42248.1    GGFJ01007321    MBW56462.1    GGFK01009375    MBW42696.1    GGFM01003900    MBW24651.1    GGFJ01007322    MBW56463.1    GFDL01007587    JAV27458.1    KXJ78142.1    GGFM01007691    MBW28442.1    GGFM01004798    MBW25549.1    JXUM01098528    KXJ72300.1    EAT44105.1    EAT44103.1    EAT44104.1    GAPW01002389    JAC11209.1    KXJ72299.1   
Pfam
PF00561   Abhydrolase_1        + More
PF12697   Abhydrolase_6
PF00704   Glyco_hydro_18
PF01607   CBM_14
Interpro
IPR000073   AB_hydrolase_1        + More
IPR029058   AB_hydrolase       
IPR002557   Chitin-bd_dom       
IPR001223   Glyco_hydro18_cat       
IPR029070   Chitinase_insertion_sf       
IPR011583   Chitinase_II       
IPR036508   Chitin-bd_dom_sf       
IPR017853   Glycoside_hydrolase_SF       
SUPFAM
SSF53474   SSF53474        + More
SSF57625   SSF57625       
SSF51445   SSF51445       
SSF54556   SSF54556       
Gene 3D
PDB
3P2M     E-value=1.13792e-07,     Score=133

Ontologies

Topology

Length:
334
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01345
Exp number, first 60 AAs:
0.00024
Total prob of N-in:
0.01928
outside
1  -  334
 
 

Population Genetic Test Statistics

Pi
332.898686
Theta
234.867912
Tajima's D
1.267518
CLR
0.189295
CSRT
0.732013399330034
Interpretation
Uncertain
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