Silkworm Genome Informatics Database

Gene

KWMTBOMO05731

Pre Gene Modal

BGIBMGA006872

Annotation

PREDICTED:_uncharacterized_protein_LOC106131814_[Amyelois_transitella]

Location

Bomo_Chr10(+):8947706-8951675 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.085

CDS

ATGATCGAAGACACAGAAATAGCAGCGTTATCCACAACTGGCAAGATAGATCCGACAGAGTTCGATGTGACGATTGCAGCGTTATTGACGGGCTTAGGTGCAACTAAATATATTAAGATTTTCAAAAAGCGCAATATAGGACAAAGTACTCTTATAGAATTAACAAATGAAGACCTCATAAAACTAGGCTTAGATGATGATGACATCAGAAAGAAGTTATTGGAAGAAATAAAAAATTTACCTATTTATGAAGAGTTCTCAATAGAGTCGAGAAATGATTTTGGTATTATTCCAACTGAAATTGCTGATATATTGGAAGCAAGCTCTGAGCACCTGTACAGAATATACTTGAGTATAATGGCCAACACGTTAGCTTTGAAGAAAACTAAGAATATTACAGACTGTTTGATATACCGTGATCAGTACGCCTCGAATATGGCACAGGCAGTATTGAGTGAACTGACAACGATTTTAAATTCAATGGAAATCGCATTGCACACAAGGCTAAAGGTACTCACGTCTGATACTAAAAAGCGTAAAAACAAAAAAATCATCGTGGGAGTCACAGGTAGTATCGTGATAGCAGTTTTAGCCGCGTTTTTTGTACAATCTTTAAAGAGACTTTGA

Protein

MIEDTEIAALSTTGKIDPTEFDVTIAALLTGLGATKYIKIFKKRNIGQSTLIELTNEDLIKLGLDDDDIRKKLLEEIKNLPIYEEFSIESRNDFGIIPTEIADILEASSEHLYRIYLSIMANTLALKKTKNITDCLIYRDQYASNMAQAVLSELTTILNSMEIALHTRLKVLTSDTKKRKNKKIIVGVTGSIVIAVLAAFFVQSLKRL

Uniprot

H9JBH7 A0A1E1VZE5 A0A194PDV8 A0A194RGJ8 S4P766 A0A212EN40 + More
A0A2A4K5P4 A0A2H1VYP9 A0A0L7KPD3

Pubmed

19121390 26354079 23622113 22118469 26227816

EMBL

BABH01030912 BABH01030913 GDQN01011023 JAT80031.1 KQ459606 KPI91442.1 + More
KQ460398 KPJ15056.1 GAIX01006531 JAA86029.1 AGBW02013719 OWR42915.1 NWSH01000130 PCG79238.1 ODYU01005260 SOQ45938.1 JTDY01007732 KOB64980.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151 UP000218220 UP000037510 + More

PRIDE

H9JBH7

Pfam

PF07647   SAM_2        + More
PF08205   C2-set_2
PF07686   V-set
PF00536   SAM_1

Interpro

IPR001660   SAM        + More
IPR013761   SAM/pointed_sf
IPR013106   Ig_V-set
IPR036179   Ig-like_dom_sf
IPR013162   CD80_C2-set
IPR013783   Ig-like_fold
IPR007110   Ig-like_dom
IPR003599   Ig_sub

SUPFAM

SSF47769 SSF47769 + More
SSF48726 SSF48726

Gene 3D

1.10.150.50 2.60.40.10

ProteinModelPortal

H9JBH7 A0A1E1VZE5 A0A194PDV8 A0A194RGJ8 S4P766 A0A212EN40 + More
A0A2A4K5P4 A0A2H1VYP9 A0A0L7KPD3

KEGG

101742876 no KO assigned | (RefSeq) uncharacterized LOC101742876

GO

GO:0016021 GO:0005515 GO:0006508 GO:0008270 GO:0004180 GO:0006207 GO:0046872 GO:0004088 GO:0006541 GO:0016812 GO:0016597

Length:

208

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

27.37424

Exp number, first 60 AAs:

7.14793

Total prob of N-in:

0.59291

inside

1 - 183

TMhelix

184 - 203

outside

204 - 208

Pi

152.93084

Theta

185.748096

Tajima's D

-0.629749

CLR

1859.331781

CSRT

0.213089345532723

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics