SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05730
Pre Gene Modal
BGIBMGA006871
Annotation
Carboxypeptidase_A2_[Papilio_xuthus]
Location in the cell
Mitochondrial   Reliability : 1.375 Nuclear   Reliability : 1.249
 

Sequence

CDS
ATGGCGCGTCGCCTGGCGCTGCTCGCGCTGCTGGCGTGCGTGGTGGCGCTTCGCCGCCCGCCTCCTACTTACGACGACATGTACTACTCCGACTCCGGGGACTCCTATTCCCTGTGGGATGATTATGACGACTCCTACGAAACAACCCCTCCGCCGCGATTACGTCCTACGACGACTAGTGCTAAAGTGATACTAAGGAATAAAGTTCCAAAAGTGAACGTGACGGTTAAAACGTCAAAAGGTGATGATAAAAAAATAATAAAAACCACAAACATTAATATTGAGAGTCATACAAACTTTATAGTGACAAAGGCTCCTGTTGTGAGTCAAGGGACGGTCACAAGGCGCCCTGTGATCCAAATCAGTGAAGACTATGTTATAGTTGAATCTCCAGAGCTACATGCCGATCAGTTTTCAAAATCTAGCACGAAAAAGCCTGTGACGTCACGTCGGCCATCCTCCAGCAAGCGACCTACGACAAAGCGGCCCCCAACGACTCGTCGATCGCGACCACCGCTTAAAACTACCAAAGCTCCAAAAGTAAAAAAACCTACATGTCCCCCGAAAAGTACTGGGTGGCTGTCATCATTTTTTCAAGATGTCAAAGAAAAAAAAACTCCCAAGAAACCCGCAAAATCAGTTCCAGGTATATTTTCAAATATATACAATTGGTTTGTGAACAAAAAAACTTCATGGTTCGGCGGAGACGGCGGATGGTTCCAAGGTTCGGTAAAAGCCAAAAAACCAAATTATATTTTTCCAACGACAACCACACCAGAGCCGCTCACGCCTGCGCCCAGCTGGTTCCATACCCTTGTTGAATCGGAGGAAAACGATGGTGCCTACGCCAGCGAACTCAGTACAAGTAAGAAACCAACAAAGAAATCTTTGAAGAAGACATACAAAGGTTATCAGTTGTTGCGAACATACCCAGACGTACAATGGAAGGTTCAAGAAATGTTAGATTTACAAGAAGAAGCTCAAGGTTCTGGTATAATGTGGTGGACTCCACCCTCTCTGAATGGCACTACGGATTTAGTCGTACCCTCAGACTTACTAGAAGACGTCAAAGAACAGTTAAAATCATCGCAGATAGATTACGATGTAGTTATTTGGGACTTGCAGAAAGCCATCGCCTACGAAAATCCACGTTTATCAAAAAAACAAAGAATAGAACTTGAACAAGTTCGAGGACATCCGATGACCTGGAGACGTTATCATCGTTACGCCGACATATTACGTTATTTGGAGTATTTACAACATTCTCATTCCGATGTAATAGAACTGATTCCTCTCGGTCGCTCTTCCGAAGGTCTTCCTTTAGTGGCTGTTAAGATCTCGGTATCGAATGACAATCAGATGAAGGAATCTGGAAATAAAACAAATAAAAAGAAATGGAAGCTTCGGTCCCATATGAAACCAGCTGTGTGGATCGATGGAGGAACTCACGCTCGGGAGTGGATAGCACCGGCTGTCGCAACATGGATAATCCACACTCTTGTTGAAGGAGAAAAAGGCTTAGGAGCAGACTTAGAAGTACTAAAGCAAGCTGACTTCTATATAATGCCAGTGTTAAACCCAGACGGGTATGAACACTCGCACACGCATGACCGACTATGGAGCAAAACGCGTTCACGCTCCCCCGATCATTCTGACGACTACTTCGTTGGCTGGTTTCCATGGAACTGGGGTCAAGTTGAATGTGTGGGTGTGGATGCAGACCGCAACTGGGACTACCATTGGGGCGAGAAAGACTCCTCGACGGATCCTTGCTCAGATAACTACGCTGGGCCCCATCCGTTCAGTGAACCCGAGACGCGGGCTGTTTCAGAATTTCTTGCAGAGCATCGAGGACAAATTAAAGTTTTTATATCTCTGCATGCCTATACCCAAGCTTGGCTAGTACCAAGTTCCCAAGCCCACGCGCCCTTCGCCGATGATGGAATACTCATGGAAATGGGAAAATTGGCAACAACGGCGCTTTCCGACTTATTCGGTACCAAGTATCAGCTGGGCACTGTGGCAGATTTGCGGCAGCCTGCGTCTGGGATGTCTCATGATTGGGCCAAGGCTCGGGCTGGCATCAAGTTTTCCTATCACGTTGACTTGCGAGATTCGTTTGGACCTTACGGCTTTCTACTACCTGGATCGCAAATTGTATCAACGGCTCGCGAAACTTGGCAAGCAGTTAAAGCAATTGTGGACAATTTGACACCTTAA
Protein
MARRLALLALLACVVALRRPPPTYDDMYYSDSGDSYSLWDDYDDSYETTPPPRLRPTTTSAKVILRNKVPKVNVTVKTSKGDDKKIIKTTNINIESHTNFIVTKAPVVSQGTVTRRPVIQISEDYVIVESPELHADQFSKSSTKKPVTSRRPSSSKRPTTKRPPTTRRSRPPLKTTKAPKVKKPTCPPKSTGWLSSFFQDVKEKKTPKKPAKSVPGIFSNIYNWFVNKKTSWFGGDGGWFQGSVKAKKPNYIFPTTTTPEPLTPAPSWFHTLVESEENDGAYASELSTSKKPTKKSLKKTYKGYQLLRTYPDVQWKVQEMLDLQEEAQGSGIMWWTPPSLNGTTDLVVPSDLLEDVKEQLKSSQIDYDVVIWDLQKAIAYENPRLSKKQRIELEQVRGHPMTWRRYHRYADILRYLEYLQHSHSDVIELIPLGRSSEGLPLVAVKISVSNDNQMKESGNKTNKKKWKLRSHMKPAVWIDGGTHAREWIAPAVATWIIHTLVEGEKGLGADLEVLKQADFYIMPVLNPDGYEHSHTHDRLWSKTRSRSPDHSDDYFVGWFPWNWGQVECVGVDADRNWDYHWGEKDSSTDPCSDNYAGPHPFSEPETRAVSEFLAEHRGQIKVFISLHAYTQAWLVPSSQAHAPFADDGILMEMGKLATTALSDLFGTKYQLGTVADLRQPASGMSHDWAKARAGIKFSYHVDLRDSFGPYGFLLPGSQIVSTARETWQAVKAIVDNLTP

Summary

Pfam
PF02244   Propep_M14        + More
PF00246   Peptidase_M14
Interpro
IPR036990   M14A-like_propep        + More
IPR003146   M14A_act_pep       
IPR034223   IGCP-like_CPD       
IPR000834   Peptidase_M14       
Gene 3D
PDB
2BOA     E-value=2.09472e-61,     Score=600

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.963644
 
 
Length:
739
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0833099999999998
Exp number, first 60 AAs:
0.08092
Total prob of N-in:
0.00468
outside
1  -  739
 
 

Population Genetic Test Statistics

Pi
202.751558
Theta
193.605809
Tajima's D
0.097442
CLR
0.953264
CSRT
0.395680215989201
Interpretation
Uncertain
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