SGID The Silkworm Genome Information Database
Gene
KWMTBOMO05725
Pre Gene Modal
BGIBMGA006869
Annotation
PREDICTED:_uncharacterized_protein_LOC101742249_isoform_X3_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.894
 

Sequence

CDS
ATGACCATTACTAGGACGACCGTCGCGACCTCCGGCACGTCTGTTTACGTGAACACGGGCTACCTTCAGACGCTGCCAGGATTACTCAAATTAGCGCAATTCCTCCTTGGGATAGCGTGCGTGGCTCTGGTTGCCTACTACATGGACCACGGATATTCAACGCAATCATACAAACCTGAGTTATTCTTCTTGTTGATATCGGTCACATTCCTTATAGGAACATTCTGTTTGTTGTTGTCGTGCTTAATATCCTTGGCCACCGCAACTGTTATCTCTAAAACCATTTATGAAGTTATTTATCATGGAATCGCATTTATTCTGTATTTGTGTGCTGGACTTACTTTGCTCATAGAAGTTAATCACCAAACCAGATATAGAAGAGATTTTGAACCGTTTTTGGCGGCTTCGATAATGGGTCTGGTGATGGCTGGATTGTATCTTTTGAGCACCTTTTTGGCAAACCGCAGATACCGTGGAATATAA
Protein
MTITRTTVATSGTSVYVNTGYLQTLPGLLKLAQFLLGIACVALVAYYMDHGYSTQSYKPELFFLLISVTFLIGTFCLLLSCLISLATATVISKTIYEVIYHGIAFILYLCAGLTLLIEVNHQTRYRRDFEPFLAASIMGLVMAGLYLLSTFLANRRYRGI

Summary

EMBL
BABH01030909    NWSH01000130    PCG79247.1    ODYU01000765    SOQ36053.1    KQ460398    + More
KPJ15063.1    AGBW02007755    OWR54613.1    AK405224    BAM20592.1    GDQN01007192    JAT83862.1    JTDY01001022    KOB75108.1    UFQS01000048    UFQT01000048    SSW98610.1    SSX18996.1    ATLV01025073    KE525369    KFB52096.1    GANO01002827    JAB57044.1    GGFJ01010044    MBW59185.1    GGFM01001238    MBW21989.1    GGFK01006885    MBW40206.1    ADMH02000159    ETN67539.1    GAPW01005177    GAPW01005176    JAC08421.1    GAPW01005179    GAPW01005178    JAC08419.1    AXCN02002019    KQ971371    KYB25543.1    DS231955    EDS28900.1    AXCM01012207    CH477584    EAT38651.1    AAAB01008846    EAA06508.2    JXUM01087645    JXUM01087646    JXUM01087647    JXUM01087648    JXUM01087649    JXUM01087650    GFDL01005973    JAV29072.1    GFDL01006092    JAV28953.1    GFDF01001030    JAV13054.1    GAPW01005127    JAC08471.1    GFDL01006064    JAV28981.1    GFTR01002642    JAW13784.1    KQ414646    KOC66584.1    KQ434890    KZC10485.1    KZ288334    PBC27872.1    KQ435700    KOX80445.1    GBBI01001075    JAC17637.1    GDKW01003889    JAI52706.1    ACPB03022765    GAHY01000381    JAA77129.1    GECL01000023    JAP06101.1    CH916371    EDV92150.1    CH902635    EDV33735.1    GFDF01011241    JAV02843.1    CH379063    EAL32782.1    KRT06319.1    JXJN01022088    CH954180    EDV46038.1    KQS29799.1    CH479194    EDW27089.1    KQ977796    KYM99611.1    GBGD01003301    JAC85588.1    CCAG010000333    EZ423035    ADD19311.1    KK107260    QOIP01000001    EZA54096.1    RLU26928.1    CH933810    EDW07682.1    OUUW01000003    SPP78160.1    CM000162    EDX01962.1    KRK06480.1    CVRI01000054    CRK99999.1    CH940651    EDW65775.1    CH964239    EDW82848.1    AE014298    AY119575    AAF48055.1    AAM50229.1    AAN09636.1    APCN01001272    ADTU01012401    CH480851    EDW51397.1    GDHF01033038    JAI19276.1    JRES01000984    KNC26480.1    KQ982987    KYQ48531.1    KQ979878    KYN18695.1    CP012528    ALC49197.1    KB632406    ERL95104.1    APGK01056263    KB741274    ENN71352.1    GDRN01051955    JAI66350.1    KK852904    KDR14018.1    PYGN01000698    PSN42067.1    GDRN01051957    JAI66348.1    GAKP01014228    JAC44724.1    GBYB01002588    JAG72355.1    KQ459606    KPI91448.1    AJVK01006534    GFDF01011055    JAV03029.1    KQ981560    KYN39843.1    GL732525    EFX88929.1    GDRN01051956    JAI66349.1    KQ976438    KYM86868.1    GEDC01030146    JAS07152.1    GEDC01002120    JAS35178.1   
Pfam
PF01284   MARVEL
Interpro
IPR008253   Marvel       

Ontologies

Topology

Length:
160
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
88.6868899999999
Exp number, first 60 AAs:
21.97214
Total prob of N-in:
0.99249
POSSIBLE N-term signal
sequence
inside
1  -  25
TMhelix
26  -  48
outside
49  -  62
TMhelix
63  -  85
inside
86  -  97
TMhelix
98  -  117
outside
118  -  131
TMhelix
132  -  154
inside
155  -  160
 
 

Population Genetic Test Statistics

Pi
182.502959
Theta
166.71125
Tajima's D
0.157559
CLR
0.840095
CSRT
0.415629218539073
Interpretation
Uncertain
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