Gene

KWMTBOMO05723  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006867

Annotation

ribosomal_protein_S15A_[Bombyx_mori]

Location

Bomo_Chr10(+):8805486-8808995      View in EpiBrowser

Full name

40S ribosomal protein S15a       + More
40S ribosomal protein S15Aa      
40S ribosomal protein S15Ab      

Location in the cell

Cytoplasmic   Reliability : 1.803 Mitochondrial   Reliability : 1.691

CDS

ATGGTGCGTATGAACGTATTGAGTGACGCCTTAAAATCTATACATAATGCTGAAAAGCGAGGGAAAAGACAAGTCCTCATCAGGCCCTGTTCCAAAGTCATCGTTAAGTTTTTAACAGTGATGATGAAGCACGGTTACATCGGAGAGTTTGAAATCGTTGATGATCACAGAGCTGGCAAGATTGTTGTAAATCTCACAGGCAGACTAAACAAGTGTGGTGTCATTTCACCTCGTTTTGATGTTCCCATCAACGATATTGAAAGATGGACTAATCTGCTCCCCTCACGACAGTTTGGTTACCTAGTCCTTACAACAAGTGGTGGCATCATGGACCATGAAGAAGCCAGAAGAAAACACCTTGGAGGAAAAATTTTAGGCTTCTTTTTCTAA

Protein

MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKILGFFF

Similarity

Belongs to the universal ribosomal protein uS8 family.

Keywords

Complete proteome   Ribonucleoprotein   Ribosomal protein   3D-structure   Reference proteome   Polymorphism  

Feature

chain  40S ribosomal protein S15a

Uniprot

A0A0L7LI77   A0A2A4K5A9   G0ZED8   E3UUV8   A0A2H1VY86   E7DZ19   + More
A0A212F6X4   Q5UAM7   Q962R3   I4DML2   A0A194RBU1   I4DIK0   D1LYQ9   Q5MGL9   E9IV57   E1ZZB6   A0A026WLG9   A0A0J7KA13   A0A195EP44   A0A195CPK0   F4WVJ5   A0A195FL26   A0A151XJE5   A0A158NEF9   E2B3K1   A0A232FHN5   K7IT24   E0V9W8   W8C6X6   A0A0K8V034   A0A034VRE9   A0A0A1XPB9   A0A067R0T9   A0A1L8EI27   A0A0C9Q7G5   B4MA18   B4R4B5   A0A1I8MQ51   B4L6U3   A0A3B0K0V1   Q29IR2   B4H2V9   A0A0M4EML0   A0A1I8NVY9   B3MXP6   B4NQ21   A0A0L0C8Q8   B4IGR2   B4JWT1   A0A1L8EHY4   A0A1A9WDC0   B3NWP8   E1JJM9   A0A0R1EAJ2   Q6XIM8   P48149   Q56FF3   V5GW00   J3JWG7   A0A0K8TQE7   D1M800   A0A1Y1LRP7   N6UA07   D6X1S4   A0A1L8EHX3   A0A1W4WGG2   A0A1B0G5I7   D3TQ30   A0A1A9UGH2   A0A1B0B560   A0A1B0AEC7   Q7KR04   A0A1W4VJL3   A0A1B0AED4   A2IA96   Q4GXQ5   A0A0N0U430   A0A154PD30   A0A2A3ENE8   V9IAR0   A0A088ACK4   A0A2J7QTT9   A0A088FL27   A0A1B6CRI2   A0A1B0CD11   Q6EUY7   A0A0L7QZ22   A0A1L8DRV5   U5EZC5   A0A1B6MRD7   A0A1B6F2W9   A0A1B6HN46   A0A1A9UGG9   E9GEV7   A0A0P5R635   A0A0H3VB90   Q0PXZ9   A0A1A9YKH8   A0A1B0B553   A8C9Z4  

Pubmed

26227816    22118469    19121390    14668217    22651552    26354079    + More
16023793    21282665    20798317    24508170    30249741    21719571    21347285    28648823    20075255    20566863    24495485    25348373    25830018    24845553    17994087    25315136    15632085    26108605    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    14525923    8182070    12537569    23636399    22516182    23537049    26369729    28004739    18362917    19820115    20353571    12466289    17437641    21292972    17760985   

EMBL

JTDY01001022    KOB75105.1    NWSH01000130    PCG79249.1    JF265016    AEL28847.1    + More
HM590398    ADP21467.1    ODYU01005006    SOQ45462.1    HQ424722    ADT80666.1    AGBW02009960    OWR49477.1    BABH01030908    AY769331    AAV34873.1    AF400213    AAK92185.1    AK402530    BAM19152.1    KQ460398    KPJ15067.1    AK401118    KQ459606    BAM17740.1    KPI91450.1    GU084333    ACY95366.1    AY829767    AAV91381.1    GL766135    EFZ15546.1    GL435311    EFN73531.1    KK107154    QOIP01000001    EZA56897.1    RLU26484.1    LBMM01010921    KMQ87152.1    KQ978625    KYN29667.1    KQ977444    KYN02663.1    GL888387    EGI61816.1    KQ981490    KYN41118.1    KQ982080    KYQ60398.1    GL445346    EFN89753.1    NNAY01000179    OXU30261.1    AAZX01014006    DS235000    EEB10174.1    GAMC01000867    JAC05689.1    GDHF01020047    JAI32267.1    GAKP01014562    JAC44390.1    GBXI01001088    JAD13204.1    KK852824    KDR15478.1    GFDG01000523    JAV18276.1    GBYB01010118    JAG79885.1    CH940655    EDW66077.1    CM000366    EDX17817.1    CH933812    EDW06089.1    OUUW01000003    SPP78651.1    CH379063    EAL32591.1    CH479204    EDW30676.1    CP012528    ALC49008.1    CH902630    EDV38511.1    CH964291    EDW86246.1    JRES01000755    KNC28617.1    CH480836    EDW49012.1    CH916376    EDV95207.1    GFDG01000521    JAV18278.1    CH954180    EDV47210.1    KQS30408.1    AE014298    KX532043    ACZ95273.1    ANY27853.1    CM000162    KRK06207.1    KRK06208.1    AY231802    Z21673    AY084182    AY961547    AAX62449.1    GALX01002579    JAB65887.1    BT127585    KB632204    AEE62547.1    ERL90105.1    GDAI01001215    JAI16388.1    GU120424    ACY71274.1    GEZM01052887    JAV74246.1    APGK01043395    KB741014    ENN75457.1    KQ971371    EFA09970.1    GFDG01000518    JAV18281.1    CCAG010014954    EZ423532    ADD19808.1    JXJN01008617    AE013599    AY061830    AY150713    AY150714    AY150715    AY150716    AY150717    AY150718    AY150719    AY150720    AY150721    AY150722    AY150723    AY150724    AY150725    AY150726    AY150727    AY150728    EF179410    ABM55416.1    AM048968    CAJ17203.1    KQ435840    KOX71394.1    KQ434874    KZC09697.1    KZ288204    PBC33220.1    JR038316    AEY58208.1    NEVH01011193    PNF31998.1    KJ930032    AIM47111.1    GEDC01021228    GEDC01013552    JAS16070.1    JAS23746.1    AJWK01007293    AJ783884    CAH04332.1    KQ414685    KOC63812.1    GFDF01004902    JAV09182.1    GANO01001042    JAB58829.1    GEBQ01001483    JAT38494.1    GECZ01025338    JAS44431.1    GECU01031681    JAS76025.1    GL732541    EFX82013.1    GDIQ01105108    GDIP01050371    LRGB01002121    JAL46618.1    JAM53344.1    KZS09069.1    KJ820730    AJW31525.1    DQ673387    ABG81960.1    JXJN01008616    AJVK01026357    EU035818    ABV44720.1   

Proteomes

UP000037510    UP000218220    UP000007151    UP000005204    UP000053240    UP000053268    + More
UP000000311    UP000053097    UP000279307    UP000036403    UP000078492    UP000078542    UP000007755    UP000078541    UP000075809    UP000005205    UP000008237    UP000215335    UP000002358    UP000009046    UP000027135    UP000008792    UP000000304    UP000095301    UP000009192    UP000268350    UP000001819    UP000008744    UP000092553    UP000095300    UP000007801    UP000007798    UP000037069    UP000001292    UP000001070    UP000091820    UP000008711    UP000000803    UP000002282    UP000030742    UP000019118    UP000007266    UP000192223    UP000092444    UP000078200    UP000092460    UP000092445    UP000192221    UP000053105    UP000076502    UP000242457    UP000005203    UP000235965    UP000092461    UP000053825    UP000000305    UP000076858    UP000079169    UP000092443    UP000092462   

PRIDE

Q5UAM7    E1JJM9    P48149    Q7KR04   

Pfam

PF00410   Ribosomal_S8

Interpro

IPR035987   Ribosomal_S8_sf        + More
IPR000630   Ribosomal_S8       

SUPFAM

SSF56047   SSF56047       

ProteinModelPortal

A0A0L7LI77   A0A2A4K5A9   G0ZED8   E3UUV8   A0A2H1VY86   E7DZ19   + More
A0A212F6X4   Q5UAM7   Q962R3   I4DML2   A0A194RBU1   I4DIK0   D1LYQ9   Q5MGL9   E9IV57   E1ZZB6   A0A026WLG9   A0A0J7KA13   A0A195EP44   A0A195CPK0   F4WVJ5   A0A195FL26   A0A151XJE5   A0A158NEF9   E2B3K1   A0A232FHN5   K7IT24   E0V9W8   W8C6X6   A0A0K8V034   A0A034VRE9   A0A0A1XPB9   A0A067R0T9   A0A1L8EI27   A0A0C9Q7G5   B4MA18   B4R4B5   A0A1I8MQ51   B4L6U3   A0A3B0K0V1   Q29IR2   B4H2V9   A0A0M4EML0   A0A1I8NVY9   B3MXP6   B4NQ21   A0A0L0C8Q8   B4IGR2   B4JWT1   A0A1L8EHY4   A0A1A9WDC0   B3NWP8   E1JJM9   A0A0R1EAJ2   Q6XIM8   P48149   Q56FF3   V5GW00   J3JWG7   A0A0K8TQE7   D1M800   A0A1Y1LRP7   N6UA07   D6X1S4   A0A1L8EHX3   A0A1W4WGG2   A0A1B0G5I7   D3TQ30   A0A1A9UGH2   A0A1B0B560   A0A1B0AEC7   Q7KR04   A0A1W4VJL3   A0A1B0AED4   A2IA96   Q4GXQ5   A0A0N0U430   A0A154PD30   A0A2A3ENE8   V9IAR0   A0A088ACK4   A0A2J7QTT9   A0A088FL27   A0A1B6CRI2   A0A1B0CD11   Q6EUY7   A0A0L7QZ22   A0A1L8DRV5   U5EZC5   A0A1B6MRD7   A0A1B6F2W9   A0A1B6HN46   A0A1A9UGG9   E9GEV7   A0A0P5R635   A0A0H3VB90   Q0PXZ9   A0A1A9YKH8   A0A1B0B553   A8C9Z4  

PDB

4V6W     E-value=2.33088e-66,     Score=633

KEGG

732857    K02957 small subunit ribosomal protein S15Ae | (RefSeq) RpS15A; ribosomal protein S15A

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0002181   GO:0022626   GO:0022627   GO:0005515   GO:0005634   GO:0042065   GO:0042066   GO:0003707   GO:0043565  

PANTHER

PTHR11758  

Length:

129

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11387

Exp number, first 60 AAs:

0.09822

Total prob of N-in:

0.22491

outside

1  -  129

 

 

Pi

276.668578

Theta

196.49986

Tajima's D

1.232833

CLR

0.529196

CSRT

0.723413829308535

Interpretation

Uncertain