SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05722
Pre Gene Modal
BGIBMGA006817
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_sidekick_[Bombyx_mori]
Full name
Protein sidekick      
Location in the cell
Nuclear   Reliability : 1.45 PlasmaMembrane   Reliability : 1.186
 

Sequence

CDS
ATGCAACCACCTCGATTTAGTATGCAACCTTCCACGTCAAATATTGTCAGAGAGGGTACAACCAAGATACTACAATATTCTGCGATGGGTATACCACAACCGATGTACAAATGGCTGAAAAATGGAATCCCCCTGACTGATTACTCTTCCGAATTATTTTATAAAATTCACAACACACAACGGCAAGATGCCGGCGCTTATCAGTGTATCGCAAAAAACGACGTGGGTGCAATTTTCAGCAAAAAAAGTCATATAATAGTAGCCTATATGGGAGTATTCGATAACATAACTGATACAGTCGTAAGTGTAGAATCTGGTAGGGCAGCTATAATTGAATTTCCCCATATTGAATCGGAACCATCCCCTTCGGTTATTTGGCAAGATCAACATGGAGCTTTAAAATACGATCAAAAATATGCAGTAACTGGGAAACATCAACTAGTCATATTATGTGCGAATCATGAAGATGAAAGATCATATCGAGTTCGAGCTATAAATACACAACTAGGTAAAGAAGAAAACAGTCCTTATATCAAATTAAATGTATACGGTGCTGATGACAAAGAAATACCACCGGAAATCGTTATTAAACCAGAGGATACCACAATAACAAAAGGACAAGAATACACTGACTTGTACTGTATCGCAAATGCGAGACCACTTCACGAATTAGAGACTTTATGGTTCAAAGACGGTATCATGATCGATCTAGCAGGAATTACATTTAACTTAAACGACCAATGGAATAGAACTCTATCCCTTATATCTGCTAACTTAACCCACACGGGGCAGTACACGTGTCAAGCGAGGTTGAAAACCGGCGGTTTTGCCACTGTTACCGCATCCGCAACAGTCACAGTTTATGAGAAGCCAGTATTCTTAACGAATTTAAGATCCGAAACTTTTGGAGAATTCGGAAAATCTATTGTATTGGAATGTGATGTTCAAGGTATACCGTTACCTGGGATCACTTGGTATAAAGACGCTAAAAAGATCGCGAGTGTAGGTGCTGAAGTCGGAGAATCGGACAACTCAGATGTTGATGATGGCGGAGGCAGGTACAGAGTCGAAGTGGATCGATCACTTGTCATCAGCGATCTAAAAATGGAAGACATGGGTATTTTTCAATGTATAGCGAGCAACGACGCCGGGGAAACGTCCATATACACGTGGCTGAAAATAAAGACGTCCCCGCCTATAATGCAGACTCCGCCATCGAATCTGACCGTACTCGACGGGAAAGACGCAACTATTTCATGCCGTGCCATCGGAGCACCAACTCCCAACGTTACCTGGTACTTTAATGACTCCTTAATAATAAATCTATCTGGACGACTGCAAGCTCTTGAAGATGGAGATTTATTGATAACTAGCACAACAACAGCAGACAGCGGCAAATATACGTGTCTTCGTGCGAACGACGCCGGAAACGTATCTGGAGAGGCATATCTGACAGTACTCGTGAGAACTCAAATTATTGCTCCGCCTGTGGACACTCGAGTGCTTCTAGGTCATACAGCGACGTTGCAATGCAAAGTTTCGAACGATCCCAATGTCAAATACAATATTGATTGGTTCCACAACAAGCAGCCGATGACAGCTGGCTCCAGGGTGATAGTGTCGGCGGACGGGGCACTGCAAGTGCAGGCGGTGCGCGCTAGCGACGCCGGCGAGTACACGTGCGTGGTGACGTCACCGGGCGGCAACCACACGCGGCACGCGGTCCTCTCCGTCATCGAGCTGCCCTTTGCACCGACAAACGTCCGCGCAATGAGACTGGAGGCGGCCTCTCAGCGCGCCGTCAACATATCGTGGACACCCGGTTTTGACGGAAACTCACCGATCCAAAAGTTTATAGTTCAAAGGAGAGTCGTCCCCGAATTCGGACCTATACCGGACCCATTGCTAAATTGGGTAACAGAACCGATGAACGTTTCTTCGACCCAACGCTGGGCTTTATTGACGAGTTTGAAGGCCGCCACTTCGTACCAGTTCAGAGTCTCAGCTGTGAACACAGTAGGGGAAGGGCCGCCGTCGGACCCGACAGACGTGCTGACCCTTCCACAGGAAGCGCCGTCCGGTCCTCCCGTTGGATTCATAGCTTCCGCGCGTTCTTCATCAGAAATAATAACCCAATGGCAGCCTCCTTTAGAAGAGCATCGAAACGGACACATTCTTGGATTCGTCATTAGATACAGACTACGTGGCTACGAAAACAGCCCTTGGACTTACCAGAACATCACCAACGAGGCACAGAGGAACTATTTAATACAAGACTTGATCACGTGGAAAGATTACAACATCCAGATTGCTGCGTACAACGACAAAGGTGTTGGAGTATTCTCAGATAGCTACACTATCAAAACGAAGGAGGGAGTGCCCGAGGCGGCGCCCGACAGCGTGCGGTGTGAGGCGTACAACTCGACCGCGGTCATGGTCACGTGGACCCCGCCGAACCCGCAGAAAATTAACGGCATCAACCAGGGCTATAAGATTCAAGCGTGGAAATGGGACGACGCAGAGAACGAAAACGTTGAACAGAAATTAGCAAGTGTGCCGCCCAACTTGCTGGACCCCCTCACCGAACAGTCGGCCATAATAGATGACCTCGAGCGGTTCACGGAATACAATATCACGGTGTTGTGCTTCACGGAACCAGGAGACGGACCCCGCAGCGATTACTTCGTCGTTAGGACCAAAGAAGACATTCCCGACGAAGTTGGAAGTCTGCTTTTTGATGAAATATCAGACCGCGCAGTAAGAGTGTCGTGGAGTCCACCGAAAAAGTCCAACGGTATTCTGCTCGGCTACAAACTGTCTTATGAAATAATAAACAATTCGAAGTCTTACAAAGAAGAGGTCCTACCGCCAAACGTTACGAGCATCAAAGTCGAACAATTGCAAGCGAGCACCCATTACAAGTTCTGGCTGTGTGGCATGACGGCGGTGGGGTCGGGCGCGGCCCGCGCGGCCACCATCCAGTCGGGCGTGGAGCCCGTGCTGCCCGACGCGCCGCGGAACCTCGCCCTCTCCAACATCGACGCCTTCTCTGTGCTGCTGCAGTTCACCCCCGGCTTCGACGGCAACTCTTCTATATCGCTGTGGACCGTGCAGGCGCAAACGGCACGCAACTCGTCTTGGATTACAATCTATGAAGTGAACGCTCCAGAAGCTCAATCCATACTGGTCACCGGCTTGGTCCCCTTCACGACATACAGACTGCGCTTGATAGCGACTAATGTAGTAGGATCCTCTCAACCTTCGGAGCCCTGTAAGGAGTTTCAGACCATCCAGGCGCCTCCGCGTCATCCCCCCAAGAACGTCACGGTTCGCGCCGTCAGTGCCAATAACTTGAGAGTGAGATGGATTCCTTTACAGCAGAGCGAATGGTACGGTAACCCTAAAGGCTATAACATAACGTACAAGAGGAGCGGAACAAATGACACACTTCATAGCATTATCGAAGATCACACGGCCAATTCACATGTCTTAGCCAATTTGGAGGAGTGGTCGGTCTACGAAATACGTATGACTGCAATAAACGAAGTGGGCACTTCAGCCGAAAGTCCTACGGCTTTTGAGAGGACCAGGGAAGCTGTGCCATCACGAGGCCCGAGCGACGTATCAGCGAACGCCACTTCATCGACTACGGTGGTGGTCTTGTGGGGCGACATCTCTGCACAAGATCAAAACGGTCTCATTGAAGGCTACAAGGTGTGCTACGCGGCCGTGACGCCGCCGCCGCGCCCCGAACACAAGAAGATCGAATGTCAAGCAATACCCTCCAATCAGACGCACACTGTCACACTGACCGAGCTCAGGAAATACGTCGTGTACCAGATACAAGTGCTCGGCTACACGAGGCTGGGCGACGGAGCACTCAGCGACCCCCCGGTTACTGCAAGGACTTTTGAAGACACACCGGGGCCCCCATCCAACGTCTCTTTCCCCGATGTCACGTTTACGACAGCTCGGATCATATGGGATGTACCGGAGGACCCGAACGGCGAGATACTCGCTTACAAAGTCGTGTACCATCTCAATAGTTCCACGCAGCACATGTTCTCCAGAGAATTTTTACCGTCAGACCGCACATTTAGAGCGACAGAGTTGTCGTCGGAGCAGTACTACGTGTTCAGCGTGCGCGCTCAGACGCGACTGGGCTGGGGGGTGACCGCCCGCGCGCTCGTACTGACGACGGCCAACCGCTCCCCGCCCCTGCCGCCCCCGCGCCCGCACGTAGCGCGCTCCTTGCTGCAGCCGCACCACATCACCTTCTCCTGGACGCCCGGAGACGACGGATACGCGCCGCTCAGGTACTACACAGTTCAGCAAAAGGAGGAAGGAGGCACGTGGCAAACTATCCCTGAGAGAATAGATCCGTTTGCCACATCCTACACCGCTGAGGGCTTGAAGCCCTATACCGGCTATCAATTCAGGATTCGAGCCACCAACGACATGGGCCCCAGTCGCTACAGTAACGCTACTGAAACTGTTCGGACCTTACCTGCAGCTCCGAGTAAAGCCGTTGAGAATCTGCACGTGGTTCCAATAACTCCGAACAGCGTGCGCGTGCAGTGGACGCCGCTGTCTGAACAGTACTGGAGTGGTGATGCTCGGACGGGAGGGTACCGAATATTTTATCAACCACTCACAGACTTCCCTACTGCATTGCAACAGACCATGAAACTTGAAGTGACCGGTGTAAAGACTTCAGAAGCTGTTCTGACGGAGCTGGCGGTGGACCGTAACTACGAGATCAGCGTGTGCGGCGTGAACTCGCAGGGGTCCGGTCCCGCCGGCACCCCGGCCGTGGTGTGGGTGGGCGAGGCCGTGCCCACCGCCCCGCCCGCCGCGCTCTCCGCCGTGCCGCTGTCCCCCACCGAGGTCACGCTCAACTGGGCGCCGCCCGCTCTGCACCACCGCAATGGAGATCTACTAGGCTATAAGATTTTCTACATAATGACAGAATCACCCGAAGACCCGGAGCCGGGGCGACGCGTTGAGGAAGAAATAGAAGTGGTCCCCGCCACGGCCACTTCACATTCGCTGGTCTTTCTCGATAAATACACGCAATATCGTATTCAGGTGTTGGCGTTTAACGCGGCCGGTGATGGACCGCGTTCGAATGCCGTAGTGGCACGAACGATGCAGGGCCTGCCCTCCGCGCCCAGAAACATTACCTTCACCGACATCACCATGAACAGTCTCGTAGTGGCGTGGGAGCCGCCGCGCCGCCGCAACGGTCCGGTGCAGGCCTACCTCGTCACGTACGAGACCGTGCAACAAGACGAACGTTTCAGCAAACAGGTGAAACAAAAAGTAACAGAGCGAAGGTTGGCTGTGGGCGGGCTCGAGGAGGAGGCGGAGTACCGGTTCAGCGTGCGTGCGGTGACGGTGGGTGCGGGCGCGGAGAGCGCGGCCCGCGTGCGCACCGGCCCGCAGCCCGGCTCGCCCTCCGCCCCCCGCCTGCTGCAGCTGGCGCCCGAGCTGGCGGCGCTGCGTCTGCGCTGGAACAACACCCTTTCCGGCCGCGGACCGCTCCTCGGGTATTACATCGAGGCACGCAGAAAAGATGACACTCGTTGGGAAACCATCACGAGAACAAGCAACGGAATGTTAGAAGAGTTCACCATTTCGTATCAGAGCTTACTGCCGTCGACAGCTTACACGTTCCGGGTCATCGCGTACAACGCCTACGGCATCAGCCAGCCAGCTTACAACGAAAAAGTGATAGTCACACCTTCGAAGCTGTACCTGGAGTACGGATATCTGCAATATCGACCCTTCTACCGACACACGTGGTTCATGGTCGTGCTCGCCGCCACTTCCGTCGTCATTATCATCACCGTCATAGCTATTCTTTGCGTCAAAAGCAAGAGTTACAAATATAAAAAAGAAGCTCAGAAGAGCCTAGAGGAGCTGACGGGCGAGCGCGAGGAGCGCGGCTCGCTGGCCATGGAGCTGTACAGCGAGGGCGGCGCGTCGGTGCGGCGCAAGCCCGCCGCGCCCGGGAAGCCGCCGCCGCGCCCCGCGCCCGCCTCCGTGCTCTACCACAGCGACGAGGAGAGTCTGCGCGCCTACGACGCCAACGCCGACGACTCCTCGCTCACAGAGAAACCCTCGGAGATGAGCTCCTCTGACTCGCAGAATTCGGAAAGTGAAAACGAAAGCGTGAGGTCTGAACCACATTCTTTCGTGAATCATTACGCCAACGTTAACGATACGTTACGACAGTCTTGGAAGAAACAGCGACCCGTACGTAATTACTCCAGCTACACGGACTCCGAGCCCGAGGGTAGCGCCGTGGTCAGCCTCAACGGAGGTCAGATCGTGATGAACAACATGGCACGGTCGCGTGCCCCGCTGCCTGGCTTCTCTTCGTTTGTATGA
Protein
MQPPRFSMQPSTSNIVREGTTKILQYSAMGIPQPMYKWLKNGIPLTDYSSELFYKIHNTQRQDAGAYQCIAKNDVGAIFSKKSHIIVAYMGVFDNITDTVVSVESGRAAIIEFPHIESEPSPSVIWQDQHGALKYDQKYAVTGKHQLVILCANHEDERSYRVRAINTQLGKEENSPYIKLNVYGADDKEIPPEIVIKPEDTTITKGQEYTDLYCIANARPLHELETLWFKDGIMIDLAGITFNLNDQWNRTLSLISANLTHTGQYTCQARLKTGGFATVTASATVTVYEKPVFLTNLRSETFGEFGKSIVLECDVQGIPLPGITWYKDAKKIASVGAEVGESDNSDVDDGGGRYRVEVDRSLVISDLKMEDMGIFQCIASNDAGETSIYTWLKIKTSPPIMQTPPSNLTVLDGKDATISCRAIGAPTPNVTWYFNDSLIINLSGRLQALEDGDLLITSTTTADSGKYTCLRANDAGNVSGEAYLTVLVRTQIIAPPVDTRVLLGHTATLQCKVSNDPNVKYNIDWFHNKQPMTAGSRVIVSADGALQVQAVRASDAGEYTCVVTSPGGNHTRHAVLSVIELPFAPTNVRAMRLEAASQRAVNISWTPGFDGNSPIQKFIVQRRVVPEFGPIPDPLLNWVTEPMNVSSTQRWALLTSLKAATSYQFRVSAVNTVGEGPPSDPTDVLTLPQEAPSGPPVGFIASARSSSEIITQWQPPLEEHRNGHILGFVIRYRLRGYENSPWTYQNITNEAQRNYLIQDLITWKDYNIQIAAYNDKGVGVFSDSYTIKTKEGVPEAAPDSVRCEAYNSTAVMVTWTPPNPQKINGINQGYKIQAWKWDDAENENVEQKLASVPPNLLDPLTEQSAIIDDLERFTEYNITVLCFTEPGDGPRSDYFVVRTKEDIPDEVGSLLFDEISDRAVRVSWSPPKKSNGILLGYKLSYEIINNSKSYKEEVLPPNVTSIKVEQLQASTHYKFWLCGMTAVGSGAARAATIQSGVEPVLPDAPRNLALSNIDAFSVLLQFTPGFDGNSSISLWTVQAQTARNSSWITIYEVNAPEAQSILVTGLVPFTTYRLRLIATNVVGSSQPSEPCKEFQTIQAPPRHPPKNVTVRAVSANNLRVRWIPLQQSEWYGNPKGYNITYKRSGTNDTLHSIIEDHTANSHVLANLEEWSVYEIRMTAINEVGTSAESPTAFERTREAVPSRGPSDVSANATSSTTVVVLWGDISAQDQNGLIEGYKVCYAAVTPPPRPEHKKIECQAIPSNQTHTVTLTELRKYVVYQIQVLGYTRLGDGALSDPPVTARTFEDTPGPPSNVSFPDVTFTTARIIWDVPEDPNGEILAYKVVYHLNSSTQHMFSREFLPSDRTFRATELSSEQYYVFSVRAQTRLGWGVTARALVLTTANRSPPLPPPRPHVARSLLQPHHITFSWTPGDDGYAPLRYYTVQQKEEGGTWQTIPERIDPFATSYTAEGLKPYTGYQFRIRATNDMGPSRYSNATETVRTLPAAPSKAVENLHVVPITPNSVRVQWTPLSEQYWSGDARTGGYRIFYQPLTDFPTALQQTMKLEVTGVKTSEAVLTELAVDRNYEISVCGVNSQGSGPAGTPAVVWVGEAVPTAPPAALSAVPLSPTEVTLNWAPPALHHRNGDLLGYKIFYIMTESPEDPEPGRRVEEEIEVVPATATSHSLVFLDKYTQYRIQVLAFNAAGDGPRSNAVVARTMQGLPSAPRNITFTDITMNSLVVAWEPPRRRNGPVQAYLVTYETVQQDERFSKQVKQKVTERRLAVGGLEEEAEYRFSVRAVTVGAGAESAARVRTGPQPGSPSAPRLLQLAPELAALRLRWNNTLSGRGPLLGYYIEARRKDDTRWETITRTSNGMLEEFTISYQSLLPSTAYTFRVIAYNAYGISQPAYNEKVIVTPSKLYLEYGYLQYRPFYRHTWFMVVLAATSVVIIITVIAILCVKSKSYKYKKEAQKSLEELTGEREERGSLAMELYSEGGASVRRKPAAPGKPPPRPAPASVLYHSDEESLRAYDANADDSSLTEKPSEMSSSDSQNSESENESVRSEPHSFVNHYANVNDTLRQSWKKQRPVRNYSSYTDSEPEGSAVVSLNGGQIVMNNMARSRAPLPGFSSFV

Summary

Description
Participates in homotypic or heterotypic interactions in the eye during pattern formation to prevent extra cells from joining the precluster and differentiating as photoreceptor cells.
Similarity
Belongs to the sidekick family.
Keywords
Alternative splicing   Cell adhesion   Complete proteome   Developmental protein   Disulfide bond   Glycoprotein   Immunoglobulin domain   Membrane   Phosphoprotein   Reference proteome   Repeat   Signal   Transmembrane   Transmembrane helix  
Feature
chain  Protein sidekick
splice variant  In isoform C.
EMBL
AGBW02009960    OWR49478.1    BABH01030903    BABH01030904    BABH01030905    BABH01030906    + More
NWSH01002220    PCG68890.1    ODYU01005006    SOQ45461.1    KQ460398    KPJ15069.1    KQ459606    KPI91452.1    AJWK01005086    AJWK01005087    GEZM01089247    JAV57601.1    GBXI01008625    JAD05667.1    GDHF01033236    JAI19078.1    CH902622    KPU75014.1    EDV34188.2    AE014298    AHN59228.1    GEZM01089246    JAV57602.1    CH477218    EAT47416.1    CH933811    EDW06438.2    AAF45541.5    ACZ95168.1    ACZ95169.1    U88578    AL132792    BT031329    DS235000    EEB10173.1    KPU75012.1    KPU75013.1    CH954183    EDV45390.2    CM000162    KRK05793.1    CH940651    KRF82053.1    KQ979479    KYN21326.1    EDX00812.2    KQS25957.1    AHN59227.1    KRK05792.1    GL766526    EFZ15068.1    KPU75015.1    KK852687    KDR18391.1    OUUW01000003    SPP78234.1    GAMC01017867    JAB88688.1    SPP78231.1    CH379064    EDY72483.2    KPU75011.1    CH963925    EDW78444.2    KQ981490    KYN41353.1    KQ978287    KYM95648.1    KRT06341.1    GDHC01015451    GDHC01013896    JAQ03178.1    JAQ04733.1    SPP78233.1    SPP78232.1    KRT06342.1    UFQT01000048    SSX18992.1    ACPB03015601    ADTU01013703    ADTU01013704    ADTU01013705    KQ414685    KOC63811.1    KQ971371    EFA10156.2    KYB25519.1    CM000366    EDX16783.1    KZ288204    PBC33221.1    AAAB01008847    EAA06917.5    GL888103    EGI67390.1    GL448543    EFN84333.1    KQ434874    KZC09696.1    SSX18990.1    SSX18991.1    APGK01043378    APGK01043379    APGK01043380    KB741014    ENN75456.1    GDHF01002132    JAI50182.1    AAZX01003332    KK107119    EZA58520.1    KQ435840    KOX71396.1    KRT06337.1    BT099831    ACV91669.1    ADMH02001354    ETN62904.1    ATLV01017864    ATLV01017865    ATLV01017866    ATLV01017867    KE525195    KFB42583.1    AXCN02002526    GFXV01000323    MBW12128.1    APCN01001075    GDHF01030202    JAI22112.1    AXCM01008687   
Pfam
PF07679   I-set        + More
PF00041   fn3
PF13895   Ig_2
Interpro
IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR013106   Ig_V-set       
IPR013098   Ig_I-set       
IPR036116   FN3_sf       
IPR003961   FN3_dom       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
SUPFAM
SSF49265   SSF49265        + More
SSF48726   SSF48726       
Gene 3D
PDB
5K6W     E-value=5.35798e-69,     Score=670

Ontologies

Topology

Subcellular location
Membrane  
Length:
2130
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.94424
Exp number, first 60 AAs:
0.00044
Total prob of N-in:
0.00025
outside
1  -  1934
TMhelix
1935  -  1957
inside
1958  -  2130
 
 

Population Genetic Test Statistics

Pi
253.447039
Theta
210.679505
Tajima's D
0.717766
CLR
0.065401
CSRT
0.581670916454177
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号