SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05718  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006865
Annotation
cAMP_responsive_element_binding_protein_[Bombyx_mori]
Full name
Annexin      
Transcription factor
Location in the cell
Nuclear   Reliability : 4.588
 

Sequence

CDS
ATGGAAGGGATGGTTGAAGAGAACGGCACCACAGGCGGTGCTGGCACGACGGATCCACTGGCCAGCGCGAGCTCTTCGACACCGGGTTCCACTCCTCATGTTGTCACCAGTATAGTACAACTTACTCTACCCAGTCAGGCTCCCTCTGCACAGGTGCAGTCTGTTATTCAACCTAATCAACAATCAGTGATACAAACAGCATCCAATATCCAATCTGTACAGATACCAAAGGGAAATGTTATACTTGTTAGTAAACCCAGTTCTGTAATACACACTACGCAAGGGACATTACAAACGTTACAGATAAAACCAGAACCTAATACACTTGTGAATACACAAGGTCAGTCATGTAGTGATGAAAGCTGTGGCAGTGGTGATGAAAGTCCCAAACGTAAATATAGAGAAATGTTGACTAGACGTCCGTCTTATCGAAAAATTTTAAATGACCTTGGAGGAGCAGAAATTGCAGTCATTCCAGCTGGAACTATACAAACTGACAGCGGATTGCACACGTTGGCCGTGTCCGGAGCGGCGGGGGGCGGAGCCATAGTGCAGTATGCAGCGAATCAAGATGGACAATTCTATGTACCGGGTCCCATACTAGAAGACCAAACGCGCAAACGAGAACTACGACTAATGAAAAACCGAGAAGCCGCTAGGGAATGCCGCAGAAAGAAAAAGGAGTACATCAAGTGCCTTGAAAACAGAGTTGCAGTCCTTGAAAACCAAAATAAAGCGCTAATAGAAGAGTTGAAGACATTAAAGGAATTATATTGCCAACAGAAAACGGAATGA
Protein
MEGMVEENGTTGGAGTTDPLASASSSTPGSTPHVVTSIVQLTLPSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEPNTLVNTQGQSCSDESCGSGDESPKRKYREMLTRRPSYRKILNDLGGAEIAVIPAGTIQTDSGLHTLAVSGAAGGGAIVQYAANQDGQFYVPGPILEDQTRKRELRLMKNREAARECRRKKKEYIKCLENRVAVLENQNKALIEELKTLKELYCQQKTE

Summary

Similarity
Belongs to the annexin family.
EMBL
DQ311259    EF682070    ABD36204.1    ABV48888.1    EF682068    ABV48886.1    + More
BABH01030896    GQ426288    ADM32514.1    KT207931    ALP86606.1    KU552108    AMH87784.1    KQ459606    KPI91457.1    ODYU01007140    SOQ49652.1    KQ460398    KPJ15074.1    AGBW02009960    OWR49482.1    NWSH01000473    PCG76169.1    RSAL01000479    RVE41583.1    EF682069    ABV48887.1    JTDY01000228    KOB78190.1    GAIX01004281    JAA88279.1    FJ155911    ACI03618.1    FJ155920    ACI03627.1    FJ155909    ACI03616.1    FJ155918    ACI03625.1    QOIP01000006    RLU21425.1    KK107485    EZA50079.1    AJ430466    CAD23079.1    NNAY01000179    OXU30259.1    DS235886    EEB20374.1    FJ155914    ACI03621.1    FJ155923    ACI03630.1    AJ430615    AJ430582    CAD24865.1    GL450389    EFN81053.1    FJ155908    ACI03615.1    FJ155917    ACI03624.1    AJ430464    CAD23077.1    GECU01014723    GECU01002736    JAS92983.1    JAT04971.1    FJ155907    ACI03614.1    FJ155916    ACI03623.1    EU523223    ACB20690.1    KC814690    AGO81725.1    GANO01000929    JAB58942.1    GECU01018461    GECU01014536    GECU01007078    JAS89245.1    JAS93170.1    JAT00629.1    AJ430465    CAD23078.1    GEBQ01029108    GEBQ01012279    GEBQ01001983    JAT10869.1    JAT27698.1    JAT37994.1    AJ430459    CAD23072.1    GECZ01028235    JAS41534.1    DS231864    EDS40219.1    JXUM01077749    JXUM01077750    JXUM01077751    KQ563026    KXJ74619.1    GECU01016587    GECU01007086    JAS91119.1    JAT00621.1    GFDL01010876    JAV24169.1    GFDL01010627    JAV24418.1    KZ288364    PBC26855.1    AJ430463    CAD23076.1    GECU01025359    JAS82347.1    AAZX01008089    KQ434783    KZC04793.1    CAD24867.1    AJ430462    CAD23075.1    AY083158    AAL92477.1    CAD24868.1    GFDL01010863    JAV24182.1    GFDL01010737    JAV24308.1    KQ982622    KYQ53733.1    KQ976760    KYN08535.1    CAD24866.1    CAD24869.1    GQ411372    GQ411376    ACX54102.1    GQ411375    ACX54101.1    CAD24871.1    KQ980151    KYN17494.1    FJ155910    ACI03617.1    FJ155919    ACI03626.1    GL435204    EFN73806.1    GALA01000969    JAA93883.1    GBHO01023985    GBHO01023984    JAG19619.1    JAG19620.1    GFDF01007899    JAV06185.1    GDHC01012538    GDHC01003627    JAQ06091.1    JAQ15002.1    GFDL01010815    JAV24230.1    GFDL01010654    JAV24391.1    KQ976417    KYM89690.1    GBHO01023987    JAG19617.1    GFDL01010930    JAV24115.1    GFDL01010539    JAV24506.1    KK852470    KDR23211.1    GBRD01010576    JAG55248.1    GBRD01005629    JAG60192.1    AJ430460    CAD23073.1    GEDC01031040    GEDC01026360    JAS06258.1    JAS10938.1    GBHO01023990    GBHO01023989    GBRD01005630    JAG19614.1    JAG19615.1    JAG60191.1    NEVH01006738    PNF36633.1    CAD24872.1    GBHO01023986    GBRD01005628    JAG19618.1    JAG60193.1    UFQS01000015    UFQT01000015    SSW97356.1    SSX17742.1   
Pfam
PF00170   bZIP_1        + More
PF02173   pKID
PF00191   Annexin
Interpro
IPR001630   Leuzip_CREB        + More
IPR004827   bZIP       
IPR003102   Coactivator_CBP_pKID       
IPR001464   Annexin       
IPR018252   Annexin_repeat_CS       
IPR018502   Annexin_repeat       
IPR037104   Annexin_sf       
Gene 3D
PDB
5ZKO     E-value=9.0081e-12,     Score=167

Ontologies

Topology

Length:
264
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.06098
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.03223
outside
1  -  264
 
 

Population Genetic Test Statistics

Pi
259.377293
Theta
209.897232
Tajima's D
0.776674
CLR
0.023301
CSRT
0.591720413979301
Interpretation
Uncertain
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