SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05713  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006823
Annotation
4-aminobutyrate_aminotransferase_[Chilo_suppressalis]
Location in the cell
Cytoplasmic   Reliability : 2.147 Mitochondrial   Reliability : 1.588
 

Sequence

CDS
ATGTTGTTACGAACTTCAAGAAGTGCTCACGTTTTTAGAGGTGTTAGGGCTTATTCGGTTTTGCAGCATGAACCAGATAAACCCAATATTCAAACAGCGATTCCCGGGCCCAAGTCGCAGCAGCTGCTGAAAGAACTCAACACTCTACAGCAAGCGGGAGCAGTTCAGCTTTTTGCTGATTATGACAAAAGTATTGGAAATTATTTCTTTGACGCCGATGGTAATGCATTCCTAGATGCTTTCACACAAATATCTTCACTTCCCGTGGGGTATAATCATCCTGAATTATTAAGCGCATTTGAAGATCAACACAATCTTAAATCTTTGATTAATAGGCCAGCTCTGGGAGTTTTTCCTTCAGCTGATTGGCCAGAGAAATTGAAAAATGTGTTATTATCTGTTGGACCCGTTGGGTTGGACAACATAGCGACAATGATGTGTGGCTCCTGTTCTATTGAGAATGCGTATAAAACTGTATTCATATGGTATCAGACCCGGGAACGCGGAGGAAAACTGGATTTCACACCCGAAGAAATTGACAGTTGTATGTTGAATCAAGTTCCTGGATCACCTAAACTGTCAATATTATCATTTGAGGGAAGTTTCCACGGTCGAACATTTGGAGCTCTGTCTACTACTAGATCGAAGCCATTGCATAAGTTAGACTGTCCAGCTTTTGATTGGCCGGTTGCTCCGTTTCCCAGATACAAATATCCCCTTGAAGAAAATATTAATGAAAATAAGCAAGAAGACAAGAGATGTCTTGAGCAAGTGGCTGACCTAATTGAGAAGTATAAAAAAAAGGGCAATCCGGTTGCTGGTATTGTTGTGGAACCAATTCAGTCCGAAGGAGGTGATAATGAAGCTTCACCGGAATTCTTTCGAGACCTTCAAAAATTATCTAAGGAGAAGGCGGTTGCATTTATTGTTGATGAAGTGCAAACCGGATGTGGTCCAACCGGGAAAATGTGGTGTCATGAACACTTCGATCTACCGACGTCACCCGACGTCGTCACCTTTAGCAAGAAAATGTTGACTGGAGGATTCTACTTCACTGCTGATTTTAAACCTCCGCACGCGTACAGAGTTTTCAACACGTGGATGGGGGATCCAGGTAAATTGATTTTACTCGAGCGCGTTCTCAAGGTCATCAAACAGGAAAACTTGCTGGATTTAGTCAACAAGACCGGAAACGTTTTGAAAAATGGCCTACACGATCTGGAAAAGGAGTTCCCTGGAGTAATACATAGTGTTCGTGGGCGAGGCACGTTCTTGGCTTATAATGCTCCCACTACTGAAACAAGGGATAAGATAAACGCCGGATTAAAGAAAAACGGTGTTTTGGGGGGAGTATGTGGTGTACGTGCAATTCGTCTGAGACCAGCATTAATTTTCGAACCTAAACATGCTGCTATTTATTTGGATGTTCTGCGGAAGACCTTGAAAGAAATATAA
Protein
MLLRTSRSAHVFRGVRAYSVLQHEPDKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKSLINRPALGVFPSADWPEKLKNVLLSVGPVGLDNIATMMCGSCSIENAYKTVFIWYQTRERGGKLDFTPEEIDSCMLNQVPGSPKLSILSFEGSFHGRTFGALSTTRSKPLHKLDCPAFDWPVAPFPRYKYPLEENINENKQEDKRCLEQVADLIEKYKKKGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSKEKAVAFIVDEVQTGCGPTGKMWCHEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWMGDPGKLILLERVLKVIKQENLLDLVNKTGNVLKNGLHDLEKEFPGVIHSVRGRGTFLAYNAPTTETRDKINAGLKKNGVLGGVCGVRAIRLRPALIFEPKHAAIYLDVLRKTLKEI

Summary

Similarity
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
EMBL
BABH01030880    BABH01030881    BABH01030882    KP657642    RSAL01000229    AKL78867.1    + More
RVE43905.1    AGBW02009960    OWR49487.1    KQ460398    KPJ15079.1    KQ459606    KPI91462.1    KK853196    KDR09977.1    GFDL01000130    JAV34915.1    NWSH01000473    PCG76162.1    CH477901    EAT35209.1    GFDF01001240    JAV12844.1    ADMH02001626    ETN61729.1    GEZM01037897    JAV81860.1    ATLV01023269    KE525341    KFB48807.1    GECZ01019158    JAS50611.1    UFQT01000292    SSX22887.1    GGMR01008420    MBY21039.1    AXCN02000557    AAAB01008807    EAA04779.4    EDO64744.1    ABLF02015715    JRES01001254    KNC24187.1    APCN01003698    CH479267    EDW39523.1    CH933809    EDW19759.2    GBHO01014019    GBHO01011481    GBRD01004188    GDHC01004507    JAG29585.1    JAG32123.1    JAG61633.1    JAQ14122.1    BT126990    AEE61952.1    KRG06807.1    ODYU01003187    SOQ41606.1    LJIJ01000010    ODN06100.1    CVRI01000036    CRK92986.1    CP012525    ALC44300.1    ALC45195.1    CH940647    EDW70352.2    GAMC01010065    JAB96490.1    GBGD01001377    JAC87512.1    KQ971371    KYB25522.1    AXCM01003051    KYB25521.1    GBBI01002615    JAC16097.1    GFTR01006448    JAW09978.1    GL888103    EGI67372.1    CH963876    EDW76808.2    CH916366    EDV97996.1    GFXV01004587    MBW16392.1    KQ981490    KYN41369.1    GEDC01000268    JAS37030.1    GL438827    EFN68249.1    GBXI01005350    JAD08942.1    KQ435763    KOX75380.1    KQ414668    KOC64629.1    KQ983106    KYQ47401.1    KQ979479    KYN21341.1    CM000363    CM002912    EDX11160.1    KMZ00672.1    CM000159    EDW95242.1    KK107295    EZA52982.1    GAKP01018375    JAC40577.1    AE014296    AAF49081.1    AAN11644.1    ACZ94750.1    AHN58150.1    QOIP01000009    RLU18757.1    CAQQ02011693    CAQQ02011694    CAQQ02011695    ADTU01013722    GDHF01013120    JAI39194.1    CH902618    EDV41065.1    CH480844    EDW49863.1    CH954178    EDV52446.1    AY113591    AAM29596.1    DS235327    EEB14730.1    KZ288409    PBC26106.1    GECZ01005067    JAS64702.1    KQ760688    OAD59355.1    EFN68248.1    GECU01011434    JAS96272.1    AAZX01003289    OUUW01000012    SPP87360.1    GECU01013170    JAS94536.1    JXJN01023043    JXJN01023044    NNAY01000889    OXU26055.1    GDKW01001752    JAI54843.1    GL453916    EFN75225.1    AJWK01019906    AJWK01019907    CCAG010021507    ACPB03015605   
Pfam
PF00202   Aminotran_3        + More
PF12739   TRAPPC-Trs85
PF00069   Pkinase
PF12202   OSR1_C
Interpro
IPR015422   PyrdxlP-dep_Trfase_dom1        + More
IPR015421   PyrdxlP-dep_Trfase_major       
IPR015424   PyrdxlP-dep_Trfase       
IPR004631   4NH2But_aminotransferase_euk       
IPR005814   Aminotrans_3       
IPR024420   TRAPP_III_complex_Trs85       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR024678   Kinase_OSR1/WNK_CCT       
SUPFAM
SSF53383   SSF53383        + More
SSF56112   SSF56112       
Gene 3D
PDB
1OHY     E-value=1.16352e-152,     Score=1385

Ontologies

Topology

Length:
484
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00633999999999998
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00433
outside
1  -  484
 
 

Population Genetic Test Statistics

Pi
23.203393
Theta
180.878765
Tajima's D
1.312263
CLR
0.592532
CSRT
0.741112944352782
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 SIINRPAIGVFPSADWPEK 100.00 9e-13
25044914 KGNDAIVNQNFDEAIK 100.00 9e-13
28556443 ELNTLQQAGAVQLFADYDK 100.00 2e-12
28556443 GTFLAYNAPTTETR 100.00 2e-07
28556443 QENLLDLVNK 100.00 4e-07
28556443 QENLLDLVNK 100.00 4e-07
28556443 AVAFIVDEVQTGCGPTGK 100.00 5e-07
26822097 IRPAIIFEPK 100.00 8e-07
26280517 ATYEEFIQQNEDRDGIR 100.00 8e-07
25044914 AVAAAAAAGIPPDTFYAFR 100.00 8e-07
28467696 AVAEYYAEYSAIFEGAGNNVGDK 100.00 8e-07
28556443 LLEIISGER 100.00 8e-07
28556443 HAAIYLDVLR 100.00 6e-06
28556443 LSILSFEGSFHGR 100.00 0.001
28556443 LSILSFEGSFHGR 100.00 0.001
28556443 YKYPLEENINENK 100.00 0.002
28556443 VFNTWMGDPGK 100.00 0.031
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