Gene

KWMTBOMO05711

Pre Gene Modal

BGIBMGA006863

Annotation

F-box_only_protein_21_[Bombyx_mori]

Location

Bomo_Chr10(+):8610796-8619819      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.257

CDS

ATGGATGAAGAACTTTCAATATATTCCTTACCAGCAGAAGTAATTTCTATAATACTGAAAAATAATGATTGCCAAGAAATACTCAATTTTAGTTCCACTTGCAAACATTTTAATGAATTAGTAAACACTGACCAACAGTTGTGGAAAGAAAAATTGAAAGAACTAATACCTGATGCAGCTTTTGTTGTAGTAGAGTCAGATTGTCATGATGGTGACTGGTTGGAAGAGATCAAAGGTTTCTACTATATAAAAAATTATGTTTTTTCTGAATTGAAAACAATGTCACCAACACATTATTGCAAACGGGATGATTTAACAAAGCAGGATGTCAGAGATTTCTTTAATGTTGCAATTTCAACTAAAATGAGTCTGGCCTATGCTATCAACATTCTTCAAGATTTTATAAAAATAACTAGTGAACTGGCAGATGCATATGCATGCAAAAAACCATTTACTTTGACTGAAATGCATTATGCCAGAATTTTGCTTCGCCATTTAATACATCCGTTCATAACTTCTAAATGGGTGCAGCTAGAAAAAAAAGATCAATTAGATCCAGAATTTGTTCTAAACTTTTTCGTCCAGTGGGTTGATATTGATAAAATGCATTCTGATGAAGATTTCGCAGAGAAGATTCAAGCGCTCGTTGATAAAGTTGAAGCTATTCTGTCAGATAAGAAATATTCAAAATCTGATTCAACACAATGGAAGACTCTAACTGCCCAAGAAAAATGTTCGCAAGGTCTCCTTACTGAGCGACAAGTACTGGCTGCTGTGTCTTACGTCATCTATGGACAGGAATGTATACAAGTTTCCGCGACTGCTAATTTGGACACATTGGATATCACTAAGATCTTACTAAATAAACGCGGGAGCGTTTTAGCCGTGGCGTGCATCTATCACGCAGTAGCGAAGCGCTGCGGCGTCGCTTGCGATGTGGTTGCGTTTCCGAATCATTTCTTCCTGGAGTGGCGCGACACTGATGGACAAGAATATAAAGTGGACCTCGAAAATGGGGAGTTAAAGTCGAAGAGGCGCTGCCCGTTTTCAGCGAGTCCAACAAACCAGAAAAATATACGCAGATACTGTCCAGAGAAGTTGTTGCAGCAAATACTCTCTTCGTATCTCAATTCAATGGGGGTACACGACAACTGGACCACACAGAACAGTCTGCGTCTAGTGGACCTGCTCAACCCGTCCCAGAACCTCGACAACGTGAACCAGAGTCACTTAAGTTACTTGCGCAATGAAGTTGACTTAGCAAATTATCCTGAACTAAGCTACAATGCCCTTCACTGTTCTCACGCGCGATTATTATCGTCCCTGTCGTATTTGGCTAATACCATCCACATAACGGCCTCCGATAGATATATGTTTCCTCATGTTGTTGTTAAGAAACGAAACAGTTACATTAAATATGCAGTTGGTATGATATGCACTCACAAGAAACATAAATATACGGGAATAATCCGCGGCTGGGATCTCATTTGGGCAGCAGACTGGAAAGAGCACGGCGAGGCCCTAAACAGATTAGAATTTGGACACAATCAGCCATTCTACTACCTCATCATTGCTAATCAATCCAGCAGATATGTGGCCCAAGAAAACCTCTCGGCGTTGACTGTTCCTCCGCGGATGCCGCATTTAGAAGATTTGATCGCGCGAGAGTTCACACATTTCAATGGTTACGCTTACGAACCGAACGACGAGAAACGAATGGAGTATCCAGACGATATGCACATTAGCAATATGTTTCGGAGTTGCGTTGAAGTTAGATACGGAGAGCCGAATCAGGACAAGAAGAAACTTGTACAATATTAA

Protein

MDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKGFYYIKNYVFSELKTMSPTHYCKRDDLTKQDVRDFFNVAISTKMSLAYAINILQDFIKITSELADAYACKKPFTLTEMHYARILLRHLIHPFITSKWVQLEKKDQLDPEFVLNFFVQWVDIDKMHSDEDFAEKIQALVDKVEAILSDKKYSKSDSTQWKTLTAQEKCSQGLLTERQVLAAVSYVIYGQECIQVSATANLDTLDITKILLNKRGSVLAVACIYHAVAKRCGVACDVVAFPNHFFLEWRDTDGQEYKVDLENGELKSKRRCPFSASPTNQKNIRRYCPEKLLQQILSSYLNSMGVHDNWTTQNSLRLVDLLNPSQNLDNVNQSHLSYLRNEVDLANYPELSYNALHCSHARLLSSLSYLANTIHITASDRYMFPHVVVKKRNSYIKYAVGMICTHKKHKYTGIIRGWDLIWAADWKEHGEALNRLEFGHNQPFYYLIIANQSSRYVAQENLSALTVPPRMPHLEDLIAREFTHFNGYAYEPNDEKRMEYPDDMHISNMFRSCVEVRYGEPNQDKKKLVQY

Uniprot

Q1HQ58   H9JBG8   A0A1E1WUG7   A0A194RGM7   A0A194PFI9   A0A1W4WZY7   + More
V9IG62   A0A088A6H8   A0A1B6E1X2   A0A1B6JSW9   A0A1B6M9T0   A0A232FFH7   A0A2J7RQP4   K7IU55   A0A067RB80   T1J6H4   A0A0L7R8X2   A0A2A3E3W4   A0A2P8Z184   A0A1Y1KQZ9   A0A151WVF3   A0A1S3KGF1   E2AGP8   A0A195C330   A0A195BL57   H9GNA9   E9GHM7   R7U7U7   A0A0P6C5Y4   C3YCT2   A0A0P6G8R5   A0A369SI30   B3S546   A0A0P5HJC0   A0A0P6HS66   A0A0P5N0Z0   A0A0N8DX58   A0A0P5NRC7   E9J1W7   A0A0N8EB68   A0A0P6H6I8   A0A0P6F3A8   A0A3P8XEC7   A0A164RI17   A0A0P5SCG6   A0A0P5MJ68   A0A369SJ44   A0A151JS79   A0A131XPM9   A0A3P8ZGH6   A0A0P6EXF5   A0A0P5B6J9   A0A0P5LGV0   A0A0N0U320   G3PLW9   A0A1S3PGA8   A0A1S3PGH4   A0A1E1X5T3   A0A3Q1HA35   A0A1S3PGH3   I3JWV8   A0A195EYN3   A0A293M7X8   A0A3B4FKR5   A0A2U3V1D8   A0A3Q4H4T8   E9QEU7   A0A341CHL6   A0A340X3K4   A0A2Y9Q8I9   A0A060Y340   A0A2Y9F939   A7RVI4   A0A3Q1AW49   A0A1W4YWT6   A0A250Y3N1   A0A3Q2EIB3   A0A3Q2VN09   A0A3P9CBK8   A0A2U3V1B6   A0A3Q0SZU0   A0A341CIE2   A0A340XA76   A0A2Y9Q8I8   A0A2Y9F8D3   A0A3P8QVN0   A0A3P9CAE7   A0A3P8SS62   A0A3Q2VFA7  

Pubmed

19121390    26354079    28648823    20075255    24845553    29403074    + More
28004739    20798317    21881562    21292972    23254933    18563158    30042472    18719581    21282665    25069045    28503490    25186727    23594743    24755649    17615350    28087693   

EMBL

DQ443194    ABF51283.1    BABH01030879    BABH01030880    GDQN01000394    JAT90660.1    + More
KQ460398    KPJ15081.1    KQ459606    KPI91464.1    JR042575    AEY59637.1    GEDC01030566    GEDC01005370    JAS06732.1    JAS31928.1    GECU01007682    GECU01005693    JAT00025.1    JAT02014.1    GEBQ01007310    JAT32667.1    NNAY01000282    OXU29516.1    NEVH01000629    PNF43159.1    AAZX01002636    KK852620    KDR20068.1    JH431878    KQ414632    KOC67221.1    KZ288405    PBC26184.1    PYGN01000245    PSN50252.1    GEZM01078132    JAV62998.1    KQ982708    KYQ51786.1    GL439375    EFN67396.1    KQ978317    KYM95269.1    KQ976453    KYM85445.1    GL732545    EFX81028.1    AMQN01001638    KB304239    ELU02231.1    GDIP01013018    JAM90697.1    GG666502    EEN61883.1    GDIQ01038511    JAN56226.1    NOWV01000008    RDD46506.1    DS985250    EDV22071.1    GDIQ01227284    JAK24441.1    GDIQ01014954    JAN79783.1    GDIQ01148928    JAL02798.1    GDIQ01083204    JAN11533.1    GDIQ01138825    JAL12901.1    GL767674    EFZ13174.1    GDIQ01043924    JAN50813.1    GDIQ01036525    JAN58212.1    GDIQ01053666    JAN41071.1    LRGB01002190    KZS08675.1    GDIQ01095529    JAL56197.1    GDIQ01155922    JAK95803.1    RDD46504.1    KQ978579    KYN30001.1    GEFM01006452    JAP69344.1    GDIQ01056750    JAN37987.1    GDIP01189430    JAJ33972.1    GDIQ01173958    JAK77767.1    KQ435922    KOX68524.1    GFAC01004604    JAT94584.1    AERX01033031    AERX01033032    KQ981920    KYN33017.1    GFWV01012263    MAA36992.1    AL935185    CT583689    FR907029    CDQ85937.1    DS469543    EDO44645.1    GFFV01001725    JAV38220.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000192223    UP000005203    UP000215335    + More
UP000235965    UP000002358    UP000027135    UP000053825    UP000242457    UP000245037    UP000075809    UP000085678    UP000000311    UP000078542    UP000078540    UP000001646    UP000000305    UP000014760    UP000001554    UP000253843    UP000009022    UP000265140    UP000076858    UP000078492    UP000053105    UP000007635    UP000087266    UP000265040    UP000005207    UP000078541    UP000261460    UP000245320    UP000261580    UP000000437    UP000252040    UP000265300    UP000248483    UP000193380    UP000248484    UP000001593    UP000257160    UP000192224    UP000265020    UP000264840    UP000265160    UP000261340    UP000265100    UP000265080   

PRIDE

Q1HQ58    H9JBG8   

Pfam

PF08755   YccV-like        + More
PF13369   Transglut_core2
PF12937   F-box-like
PF00646   F-box

Interpro

IPR001810   F-box_dom        + More
IPR036623   Hemimethylated_DNA-bd_sf       
IPR011722   Hemimethylated_DNA-bd_dom       
IPR036047   F-box-like_dom_sf       
IPR032698   SirB1_N       

SUPFAM

SSF81383   SSF81383        + More
SSF141255   SSF141255       

Gene 3D

2.30.30.390    

ProteinModelPortal

Q1HQ58   H9JBG8   A0A1E1WUG7   A0A194RGM7   A0A194PFI9   A0A1W4WZY7   + More
V9IG62   A0A088A6H8   A0A1B6E1X2   A0A1B6JSW9   A0A1B6M9T0   A0A232FFH7   A0A2J7RQP4   K7IU55   A0A067RB80   T1J6H4   A0A0L7R8X2   A0A2A3E3W4   A0A2P8Z184   A0A1Y1KQZ9   A0A151WVF3   A0A1S3KGF1   E2AGP8   A0A195C330   A0A195BL57   H9GNA9   E9GHM7   R7U7U7   A0A0P6C5Y4   C3YCT2   A0A0P6G8R5   A0A369SI30   B3S546   A0A0P5HJC0   A0A0P6HS66   A0A0P5N0Z0   A0A0N8DX58   A0A0P5NRC7   E9J1W7   A0A0N8EB68   A0A0P6H6I8   A0A0P6F3A8   A0A3P8XEC7   A0A164RI17   A0A0P5SCG6   A0A0P5MJ68   A0A369SJ44   A0A151JS79   A0A131XPM9   A0A3P8ZGH6   A0A0P6EXF5   A0A0P5B6J9   A0A0P5LGV0   A0A0N0U320   G3PLW9   A0A1S3PGA8   A0A1S3PGH4   A0A1E1X5T3   A0A3Q1HA35   A0A1S3PGH3   I3JWV8   A0A195EYN3   A0A293M7X8   A0A3B4FKR5   A0A2U3V1D8   A0A3Q4H4T8   E9QEU7   A0A341CHL6   A0A340X3K4   A0A2Y9Q8I9   A0A060Y340   A0A2Y9F939   A7RVI4   A0A3Q1AW49   A0A1W4YWT6   A0A250Y3N1   A0A3Q2EIB3   A0A3Q2VN09   A0A3P9CBK8   A0A2U3V1B6   A0A3Q0SZU0   A0A341CIE2   A0A340XA76   A0A2Y9Q8I8   A0A2Y9F8D3   A0A3P8QVN0   A0A3P9CAE7   A0A3P8SS62   A0A3Q2VFA7  

KEGG

732914    K10301 F-box protein 21 | (RefSeq) F-box only protein 21

GO

GO:0003677   GO:0005515   GO:0016020   GO:0006388   GO:0009881   GO:0019226   GO:0042065   GO:0042066   GO:0003707   GO:0043565  

Length:

606

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0389600000000002

Exp number, first 60 AAs:

0.00046

Total prob of N-in:

0.00197

outside

1  -  606

 

 

Pi

215.379466

Theta

173.498943

Tajima's D

0.302892

CLR

0.004331

CSRT

0.457527123643818

Interpretation

Uncertain