SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05710
Annotation
PREDICTED:_uncharacterized_protein_LOC105841429_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.464
 

Sequence

CDS
ATGTTTATATACGGAGCTTTTGTGCGAAATAATATCCTCATGGTTTCCTTTATATTACTTGAATTGTTAAGACTCGTTATGCTTTCGACCCTTGTTGCTACTGGGCTGTTAATACTGAAACAAAATACGATGGATATTGGTGTTCTAATTGGAGCTAGTGTTTTCGGCGGTTTTTTATTGTGTGAGTTCTATTTTTATAGTGAAATAGACGTTTACTAA
Protein
MFIYGAFVRNNILMVSFILLELLRLVMLSTLVATGLLILKQNTMDIGVLIGASVFGGFLLCEFYFYSEIDVY

Summary

Pfam
PF00226   DnaJ
Interpro
IPR001623   DnaJ_domain        + More
IPR018253   DnaJ_domain_CS       
IPR036869   J_dom_sf       
SUPFAM
SSF46565   SSF46565       
Gene 3D

Ontologies

Topology

Length:
72
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.34909
Exp number, first 60 AAs:
38.12975
Total prob of N-in:
0.72549
POSSIBLE N-term signal
sequence
inside
1  -  11
TMhelix
12  -  34
outside
35  -  43
TMhelix
44  -  66
inside
67  -  72
 
 

Population Genetic Test Statistics

Pi
154.023992
Theta
155.203402
Tajima's D
0.085817
CLR
0
CSRT
0.391130443477826
Interpretation
Uncertain
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