Gene

KWMTBOMO05706

Pre Gene Modal

BGIBMGA006860

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):8557802-8569856      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.544

CDS

ATGCAGTTGGCAGCAGATTTGTCCATACCTTTGGCATTGCGGGCTGGTGCAATCAACGGTCCCGATCGTCTTCTACCTTTGTATGTAGTGCGAGACCTCGGTGACTCTCATGGTGTGCCAGGGTTTTTCGTTGCTGGAATATTTGCAGCAAGCCTCGGAACAGTGGCGACAACATTAAATTCCTTATCTGCGATTGCTTGTCAAGATTTCGTAACAGCATTACTGGGGATAAGATTACCTGAAAATAAAGGAGCTCTAATAGCCCGATGGGTGTGCCTGATTTGTGGGGCCTTATCGTTTATATTAGTATTTGCAGTAGAACGATTGGGCCCTGTTCTGCAACTCGCTCTCTCTTTTAATGGAATGACCGGAGGCGTCTCACTCGGACTCTTCTCTCTCGGCATGTTATTTCCATGGGCTAATGCTAAAGGAGCTGTAGCAGGAGGTATTTTCGGGCTACTTGTGGTTCTTGTCGCTGGAGGTGGAGCTCAATTCGTACAAGTGCCGTTAAATAGACTCCCCGCTTCTACAGATGGATGTCCCGCAACTTATAATAGTTCGCAAATAACTCACCTAAGTGACAACGATGATCCGGTATTTTGGTTGTTTCGTTTATCATATCTTTGGTACTCGGGATTGGGATGCGCTGCAACCCTGGTAGTTGGCCTGGCAGTTTCGATCATCACTGGAGTGACAGATCCAGCAAACGTCCCTATAGATCTAATATCACCACCAGTAATCACTTGCCTAAATTCGCTGCCAAACACACTGAAGAGAGCGTTACGTGTACCTTTGCGTGTTGAATCTCAAAGGCGACGTAGTTCGAGTGTTCGACCTCCAACCATGGGCGATGATAAAGATACAAGACGCCGTCGCAGATTATCCGAGTTGGCGGGTGGAGTGTTCTACAGTGACGCACCAACACTCACCCACGGCCACGAAAACTACGCTTTAGACTTGGAGAATCCATCGCCAGATGAACATAAACAAGCTATGATTAAACTAGAAGATAGTGATGGATTTAATACACAATCATCTGTATGTTAA

Protein

MQLAADLSIPLALRAGAINGPDRLLPLYVVRDLGDSHGVPGFFVAGIFAASLGTVATTLNSLSAIACQDFVTALLGIRLPENKGALIARWVCLICGALSFILVFAVERLGPVLQLALSFNGMTGGVSLGLFSLGMLFPWANAKGAVAGGIFGLLVVLVAGGGAQFVQVPLNRLPASTDGCPATYNSSQITHLSDNDDPVFWLFRLSYLWYSGLGCAATLVVGLAVSIITGVTDPANVPIDLISPPVITCLNSLPNTLKRALRVPLRVESQRRRSSSVRPPTMGDDKDTRRRRRLSELAGGVFYSDAPTLTHGHENYALDLENPSPDEHKQAMIKLEDSDGFNTQSSVC

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A2H1VGN3   A0A212F6Y7   A0A2A4JVV6   A0A194PDY1   A0A194RC90   A0A3S2LFK1   + More
A0A2R7WXE4   A0A0T6AZE2   A0A310SJQ4   A0A154P042   A0A1B6D2P4   A0A0J7KVI8   A0A023F6H1   A0A1B6DS39   A0A1Y1MCD1   A0A139WI19   A0A139WI01   A0A0C9RRN6   A0A1B6F543   A0A1B6IF30   A0A1B6M044   A0A2J7QJT7   A0A0A9ZC26   A0A146LXE4   A0A0A9ZFM9   A0A067QP53   A0A0M8ZY87   A0A0P5W481   A0A2R5L438   A0A0P5W8V1   A0A0P6IYV1   A0A0P6ABM1   A0A0N8BD51   A0A0P5HP42   A0A162QEZ8   A0A0P5FP51   E9G1V6   A0A1Z5L912   A0A3R7LXG7   A0A293LHN1   A0A210QKZ8  

Pubmed

22118469    26354079    25474469    28004739    18362917    19820115    + More
25401762    26823975    24845553    17510324    26999592    21292972    28528879    28812685   

EMBL

ODYU01002461    SOQ39976.1    AGBW02009960    OWR49493.1    NWSH01000473    PCG76177.1    + More
KQ459606    KPI91467.1    KQ460398    KPJ15084.1    RSAL01000019    RVE52689.1    KK855873    PTY24209.1    LJIG01022449    KRT80547.1    KQ762329    OAD55963.1    KQ434781    KZC04500.1    GEDC01017463    JAS19835.1    LBMM01002853    KMQ94279.1    GBBI01001874    JAC16838.1    GEDC01008812    JAS28486.1    GEZM01036472    GEZM01036471    JAV82668.1    KQ971342    KYB27602.1    KYB27603.1    GBYB01011215    JAG80982.1    GECZ01024558    JAS45211.1    GECU01022160    JAS85546.1    GEBQ01010674    JAT29303.1    NEVH01013549    PNF28844.1    GBHO01038679    GBHO01038677    GBHO01038676    GBHO01038673    GBHO01038672    GBHO01035996    GBHO01033551    GBHO01019355    GBHO01000802    GBHO01000797    GBHO01000792    JAG04925.1    JAG04927.1    JAG04928.1    JAG04931.1    JAG04932.1    JAG07608.1    JAG10053.1    JAG24249.1    JAG42802.1    JAG42807.1    JAG42812.1    GDHC01013951    GDHC01007287    JAQ04678.1    JAQ11342.1    GBHO01038683    GBHO01038678    GBHO01036758    GBHO01036014    GBHO01033555    GBHO01033552    GBHO01005171    GBHO01004442    GBHO01000800    GBHO01000798    GBHO01000793    JAG04921.1    JAG04926.1    JAG06846.1    JAG07590.1    JAG10049.1    JAG10052.1    JAG38433.1    JAG39162.1    JAG42804.1    JAG42806.1    JAG42811.1    KK853117    KDR11160.1    KQ435798    KOX73367.1    GDIP01091389    JAM12326.1    GGLE01000116    MBY04242.1    GDIP01089949    JAM13766.1    GDUN01000894    JAN95025.1    GDIP01044800    JAM58915.1    GDIQ01189451    JAK62274.1    GDIQ01225128    JAK26597.1    LRGB01000340    KZS19635.1    GDIQ01252538    JAJ99186.1    GL732529    EFX86559.1    GFJQ02003053    JAW03917.1    QCYY01003028    ROT65842.1    GFWV01002611    MAA27341.1    NEDP02003110    OWF49417.1   

Proteomes

UP000007151    UP000218220    UP000053268    UP000053240    UP000283053    UP000076502    + More
UP000036403    UP000007266    UP000235965    UP000027135    UP000053105    UP000076858    UP000000305    UP000283509    UP000242188   

Pfam

PF00474   SSF

Interpro

IPR001734   Na/solute_symporter        + More
IPR038377   Na/Glc_symporter_sf       
IPR018212   Na/solute_symporter_CS       

Gene 3D

1.20.1730.10    

ProteinModelPortal

A0A2H1VGN3   A0A212F6Y7   A0A2A4JVV6   A0A194PDY1   A0A194RC90   A0A3S2LFK1   + More
A0A2R7WXE4   A0A0T6AZE2   A0A310SJQ4   A0A154P042   A0A1B6D2P4   A0A0J7KVI8   A0A023F6H1   A0A1B6DS39   A0A1Y1MCD1   A0A139WI19   A0A139WI01   A0A0C9RRN6   A0A1B6F543   A0A1B6IF30   A0A1B6M044   A0A2J7QJT7   A0A0A9ZC26   A0A146LXE4   A0A0A9ZFM9   A0A067QP53   A0A0M8ZY87   A0A0P5W481   A0A2R5L438   A0A0P5W8V1   A0A0P6IYV1   A0A0P6ABM1   A0A0N8BD51   A0A0P5HP42   A0A162QEZ8   A0A0P5FP51   E9G1V6   A0A1Z5L912   A0A3R7LXG7   A0A293LHN1   A0A210QKZ8  

KEGG

101740048    K14388 solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 | (RefSeq)

GO

GO:0022857   GO:0016021   GO:0005215   GO:0006810   GO:0016020   GO:0006388   GO:0009881   GO:0019226   GO:0042065   GO:0042066   GO:0003707   GO:0043565   GO:0055085  

Length:

348

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

111.71776

Exp number, first 60 AAs:

18.9474

Total prob of N-in:

0.00869

POSSIBLE N-term signal

sequence

outside

1  -  42

TMhelix

43  -  65

inside

66  -  85

TMhelix

86  -  105

outside

106  -  114

TMhelix

115  -  137

inside

138  -  143

TMhelix

144  -  166

outside

167  -  205

TMhelix

206  -  228

inside

229  -  348

 

 

Pi

137.325441

Theta

132.434655

Tajima's D

0

CLR

1.019444

CSRT

0.367031648417579

Interpretation

Uncertain