Gene

KWMTBOMO05705

Pre Gene Modal

BGIBMGA006860

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):8554872-8556503      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.897

CDS

ATGAGCCCAGACCCTACAATTCGACACTCGTTTTGGTCGGTTGTCGTCGGTGGAACTATATATTGGACGAGCATGTTTTGTGCTAACCAGGCTTCAGTCCAAAAGTATCTCTCAGTAGAAAGAATATCTCAAGTTCGCGTGGCTCTCTGGGTATCAGCATTAAGCCTGATAGCCGTATTTTCGGTGAATTTCATCACTGGCGCCGTCCTTGCCCTACACTACGCGAATTGTGATCCGATACAGGTAACGAAATTAAATTACTGA

Protein

MSPDPTIRHSFWSVVVGGTIYWTSMFCANQASVQKYLSVERISQVRVALWVSALSLIAVFSVNFITGAVLALHYANCDPIQVTKLNY

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

H9JBG5   A0A0L7L602   A0A2A4JVV6   A0A3S2LFK1   A0A2H1VGN3   A0A194PDY1   + More
A0A194RC90   A0A212F6Y7   F4X3I9   A0A0L7R0N4   A0A158NRN5   E9JAQ7   A0A2A3ENK4   A0A195EXC1   A0A195BN99   A0A026X4I2   A0A195DFZ3   A0A195CL10   A0A0J7KVI8   A0A3L8D8E8   A0A0M8ZY87   E2B5H5   A0A087ZNV2   A0A139WI01   A0A0C9RRN6   E2AIX1   A0A139WI19   A0A232EIL3   A0A151X8Z7   A0A1B6IF30   A0A1B6M044   A0A0T6AZE2   A0A023F6H1   A0A310SJQ4   A0A2J7QJS2   A0A154P042   A0A1Y1MH80   A0A1B6F543   A0A2J7QJT7   A0A1Y1MCD1   A0A067QP53   A0A1B6D2P4   A0A1B6DS39   A0A146LXE4   A0A0A9ZC26   A0A0A9ZFM9   A0A182PVP2   A0A182MPI4   B3NEY0   B4PE95   A0A182FD89   B4N328   B4QN09   Q961Q9   B4HW29   Q7Q6K4   W5JQS4   B3M780   A0A182UIZ1   A0A182YJ61   A0A2C9H889   A0A2C9GQ50   A0A2C9H5N5   A0A0M4ENA6   A0A182PZH6   B4LH02   A0A3B0JRX9   Q2M053   B4GS39   A0A0K8U2A4   A0A1I8PX36   A0A1W4VVB7   B4KWX0   A0A1A9W4N0   T1PGL6   A0A0K8VCB8   A0A034WNE1   W8BLZ4   W8B0Y7   A0A0L0C6R5   A0A084WDJ5   A0A182JJ80   B4IWQ7   A0A1B0CPY2   A0A1B0BZ70   A0A1A9YLR2   A0A1B0G5R2   A0A1A9ZMT8   A0A1A9UXU1   B0VZN2   A0A1Q3FGX9   A0A1Q3FGL7   Q17ML0   A0A0P6IYV1   A0A1J1IIU8   W4YHR6   F6TN12   A0A1W2W520   C3Z6K9  

Pubmed

19121390    26227816    26354079    22118469    21719571    21347285    + More
21282665    24508170    30249741    20798317    18362917    19820115    28648823    25474469    28004739    24845553    26823975    25401762    17994087    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    12364791    20920257    23761445    25244985    15632085    25315136    25348373    24495485    26108605    24438588    17510324    26999592    12481130    15114417    18563158   

EMBL

BABH01030875    BABH01030876    JTDY01002726    KOB70845.1    NWSH01000473    PCG76177.1    + More
RSAL01000019    RVE52689.1    ODYU01002461    SOQ39976.1    KQ459606    KPI91467.1    KQ460398    KPJ15084.1    AGBW02009960    OWR49493.1    GL888613    EGI59017.1    KQ414670    KOC64351.1    ADTU01024213    ADTU01024214    GL770679    EFZ10023.1    KZ288204    PBC33280.1    KQ981931    KYN32796.1    KQ976439    KYM86676.1    KK107021    EZA62319.1    KQ980886    KYN11813.1    KQ977649    KYN00769.1    LBMM01002853    KMQ94279.1    QOIP01000011    RLU16561.1    KQ435798    KOX73367.1    GL445827    EFN89061.1    KQ971342    KYB27603.1    GBYB01011215    JAG80982.1    GL439905    EFN66650.1    KYB27602.1    NNAY01004195    OXU18217.1    KQ982409    KYQ56790.1    GECU01022160    JAS85546.1    GEBQ01010674    JAT29303.1    LJIG01022449    KRT80547.1    GBBI01001874    JAC16838.1    KQ762329    OAD55963.1    NEVH01013549    PNF28843.1    KQ434781    KZC04500.1    GEZM01036474    GEZM01036473    JAV82667.1    GECZ01024558    JAS45211.1    PNF28844.1    GEZM01036472    GEZM01036471    JAV82668.1    KK853117    KDR11160.1    GEDC01017463    JAS19835.1    GEDC01008812    JAS28486.1    GDHC01013951    GDHC01007287    JAQ04678.1    JAQ11342.1    GBHO01038679    GBHO01038677    GBHO01038676    GBHO01038673    GBHO01038672    GBHO01035996    GBHO01033551    GBHO01019355    GBHO01000802    GBHO01000797    GBHO01000792    JAG04925.1    JAG04927.1    JAG04928.1    JAG04931.1    JAG04932.1    JAG07608.1    JAG10053.1    JAG24249.1    JAG42802.1    JAG42807.1    JAG42812.1    GBHO01038683    GBHO01038678    GBHO01036758    GBHO01036014    GBHO01033555    GBHO01033552    GBHO01005171    GBHO01004442    GBHO01000800    GBHO01000798    GBHO01000793    JAG04921.1    JAG04926.1    JAG06846.1    JAG07590.1    JAG10049.1    JAG10052.1    JAG38433.1    JAG39162.1    JAG42804.1    JAG42806.1    JAG42811.1    AXCM01012453    CH954178    EDV50253.1    CM000159    EDW92933.1    CH964062    EDW78767.1    CM000363    CM002912    EDX08891.1    KMY96988.1    AE014296    AY051427    AAF47595.3    AAK92851.1    CH480817    EDW50144.1    AAAB01008960    EAA11888.4    ADMH02000384    ETN66757.1    CH902618    EDV38741.1    APCN01000142    CP012525    ALC43380.1    AXCN02000442    AXCN02000443    CH940647    EDW69492.1    OUUW01000009    SPP84877.1    CH379069    EAL31083.2    CH479188    EDW40574.1    GDHF01031440    JAI20874.1    CH933809    EDW18591.1    KA647844    AFP62473.1    GDHF01015827    JAI36487.1    GAKP01002788    JAC56164.1    GAMC01015876    JAB90679.1    GAMC01015877    JAB90678.1    JRES01000820    KNC28108.1    ATLV01023033    KE525339    KFB48289.1    CH916366    EDV96283.1    AJWK01022836    AJWK01022837    AJWK01022838    AJWK01022839    AJWK01022840    JXJN01023005    JXJN01023006    CCAG010018755    CCAG010018756    DS231815    EDS35124.1    GFDL01008282    JAV26763.1    GFDL01008349    JAV26696.1    CH477205    EAT47914.1    GDUN01000894    JAN95025.1    CVRI01000054    CRL00147.1    AAGJ04023870    EAAA01001186    GG666588    EEN51853.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000283053    UP000053268    UP000053240    + More
UP000007151    UP000007755    UP000053825    UP000005205    UP000242457    UP000078541    UP000078540    UP000053097    UP000078492    UP000078542    UP000036403    UP000279307    UP000053105    UP000008237    UP000005203    UP000007266    UP000000311    UP000215335    UP000075809    UP000235965    UP000076502    UP000027135    UP000075885    UP000075883    UP000008711    UP000002282    UP000069272    UP000007798    UP000000304    UP000000803    UP000001292    UP000007062    UP000000673    UP000007801    UP000075902    UP000076408    UP000076407    UP000075840    UP000075903    UP000092553    UP000075886    UP000008792    UP000268350    UP000001819    UP000008744    UP000095300    UP000192221    UP000009192    UP000091820    UP000095301    UP000037069    UP000030765    UP000075880    UP000001070    UP000092461    UP000092460    UP000092443    UP000092444    UP000092445    UP000078200    UP000002320    UP000008820    UP000183832    UP000007110    UP000008144    UP000001554   

PRIDE

H9JBG5    Q961Q9   

Pfam

PF00474   SSF        + More
PF08447   PAS_3
PF00621   RhoGEF

Interpro

IPR001734   Na/solute_symporter        + More
IPR038377   Na/Glc_symporter_sf       
IPR001610   PAC       
IPR035965   PAS-like_dom_sf       
IPR000014   PAS       
IPR013655   PAS_fold_3       
IPR026817   Ect2       
IPR000219   DH-domain       
IPR036420   BRCT_dom_sf       
IPR035899   DBL_dom_sf       
IPR018212   Na/solute_symporter_CS       

SUPFAM

SSF55785   SSF55785        + More
SSF52113   SSF52113       
SSF48065   SSF48065       

Gene 3D

1.20.1730.10     1.20.900.10     3.40.50.10190    

CDD

cd00130  PAS
cd00160  RhoGEF

ProteinModelPortal

H9JBG5   A0A0L7L602   A0A2A4JVV6   A0A3S2LFK1   A0A2H1VGN3   A0A194PDY1   + More
A0A194RC90   A0A212F6Y7   F4X3I9   A0A0L7R0N4   A0A158NRN5   E9JAQ7   A0A2A3ENK4   A0A195EXC1   A0A195BN99   A0A026X4I2   A0A195DFZ3   A0A195CL10   A0A0J7KVI8   A0A3L8D8E8   A0A0M8ZY87   E2B5H5   A0A087ZNV2   A0A139WI01   A0A0C9RRN6   E2AIX1   A0A139WI19   A0A232EIL3   A0A151X8Z7   A0A1B6IF30   A0A1B6M044   A0A0T6AZE2   A0A023F6H1   A0A310SJQ4   A0A2J7QJS2   A0A154P042   A0A1Y1MH80   A0A1B6F543   A0A2J7QJT7   A0A1Y1MCD1   A0A067QP53   A0A1B6D2P4   A0A1B6DS39   A0A146LXE4   A0A0A9ZC26   A0A0A9ZFM9   A0A182PVP2   A0A182MPI4   B3NEY0   B4PE95   A0A182FD89   B4N328   B4QN09   Q961Q9   B4HW29   Q7Q6K4   W5JQS4   B3M780   A0A182UIZ1   A0A182YJ61   A0A2C9H889   A0A2C9GQ50   A0A2C9H5N5   A0A0M4ENA6   A0A182PZH6   B4LH02   A0A3B0JRX9   Q2M053   B4GS39   A0A0K8U2A4   A0A1I8PX36   A0A1W4VVB7   B4KWX0   A0A1A9W4N0   T1PGL6   A0A0K8VCB8   A0A034WNE1   W8BLZ4   W8B0Y7   A0A0L0C6R5   A0A084WDJ5   A0A182JJ80   B4IWQ7   A0A1B0CPY2   A0A1B0BZ70   A0A1A9YLR2   A0A1B0G5R2   A0A1A9ZMT8   A0A1A9UXU1   B0VZN2   A0A1Q3FGX9   A0A1Q3FGL7   Q17ML0   A0A0P6IYV1   A0A1J1IIU8   W4YHR6   F6TN12   A0A1W2W520   C3Z6K9  

KEGG

101740048    K14388 solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 | (RefSeq)

GO

GO:0022857   GO:0016021   GO:0016020   GO:0005089   GO:0035023   GO:0005096   GO:2000431   GO:0005737   GO:0005634  

PANTHER

PTHR16777  

Length:

87

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

42.7647

Exp number, first 60 AAs:

31.919

Total prob of N-in:

0.11418

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  28

inside

29  -  48

TMhelix

49  -  71

outside

72  -  87

 

 

Pi

200.807141

Theta

188.74386

Tajima's D

-0.613382

CLR

0

CSRT

0.222388880555972

Interpretation

Uncertain