Gene

KWMTBOMO05704

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr10(+):8552192-8553581      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.784

CDS

ATGATGATAACGGGTCTAAATACATATCTAGCAGTATCATTGGTGTATGTCGTATGCATTTTCTACGCATCACAGGGTGGCATGAAAGCAGTCATCATGACAGACTCATTTCAGTCAGCAGTATTGGTAGGATCTCTAGCCACGGTGTTGGCGATGGGTGCTTCGAGGGTTGGAGGCTTAGAAGCAGTTTGGAAACACGCTAGCCTCACGGACAGACTCCACTTTTTTGAGTAA

Protein

MMITGLNTYLAVSLVYVVCIFYASQGGMKAVIMTDSFQSAVLVGSLATVLAMGASRVGGLEAVWKHASLTDRLHFFE

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A194RC90   A0A2H1VGN3   A0A2A4JVV6   A0A212F6Y7   A0A3S2LFK1   H9JBG5   + More
E2AIX1   A0A0M8ZY87   A0A151X8Z7   A0A195CL10   E9JAQ7   A0A195DFZ3   A0A026X4I2   A0A3L8D8E8   F4X3I9   A0A232EIL3   A0A195EXC1   A0A067QP53   A0A195BN99   A0A0J7KVI8   A0A0L7R0N4   E2B5H5   A0A0C9RRN6   A0A158NRN5   A0A310SJQ4   A0A1B6DS39   A0A087ZNV2   A0A154P042   A0A2J7QJS2   A0A2J7QJT7   A0A1Y1MH80   A0A1Y1MCD1   A0A139WI01   A0A139WI19   A0A1B6M044   A0A2R7WYH9   A0A1B6IF30   A0A2A3ENK4   A0A023F6H1   A0A1I8PX36   A0A1B6F543   A0A1B6M0L6   A0A1B6F1B8   A0A1B6J094   A0A1B6CGF1   A0A0L7RCU1   B4HW29   A0A0K8V6R8   B4PE95   A0A226E1U3   B3NEY0   N6TA95   A0A226EL08   A0A0T6AZE2   Q961Q9   B4QN09   A0A0A9ZFM9   A0A146LXE4   A0A0A9ZC26   A0A226DZ22   A0A1A9W4N0   A0A1W4VVB7   B3M780   B4GS39   Q2M053   A0A0K8VCB8   A0A0K8U2A4   A0A226EQQ5   A0A1B0BZ70   A0A1A9YLR2   A0A3B0JRX9   A0A1B0G5R2   A0A1A9ZMT8   B4N328   A0A0M8ZM94   E2AWG6   A0A1W4WGZ1   A0A084WDJ5   A0A1A9UXU1   T1HZD6   A0A182PZH6   B0VZN2   A0A1B0CPY2   Q7Q6K4   A0A2C9H5N5   A0A2C9H889   A0A2C9GQ50   A0A3L8DIG3   A0A088AH95   A0A026X262   A0A3L8DFP4   A0A195BBB9   A0A3M6V2I6   A0A2J7PCD1   A0A2J7PCD0   A0A195BZT4   A0A154PA03   A0A139WI69   D6WJW9  

Pubmed

26354079    22118469    19121390    20798317    21282665    24508170    + More
30249741    21719571    28648823    24845553    21347285    28004739    18362917    19820115    25474469    17994087    17550304    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25401762    26823975    15632085    24438588    12364791    30382153   

EMBL

KQ460398    KPJ15084.1    ODYU01002461    SOQ39976.1    NWSH01000473    PCG76177.1    + More
AGBW02009960    OWR49493.1    RSAL01000019    RVE52689.1    BABH01030875    BABH01030876    GL439905    EFN66650.1    KQ435798    KOX73367.1    KQ982409    KYQ56790.1    KQ977649    KYN00769.1    GL770679    EFZ10023.1    KQ980886    KYN11813.1    KK107021    EZA62319.1    QOIP01000011    RLU16561.1    GL888613    EGI59017.1    NNAY01004195    OXU18217.1    KQ981931    KYN32796.1    KK853117    KDR11160.1    KQ976439    KYM86676.1    LBMM01002853    KMQ94279.1    KQ414670    KOC64351.1    GL445827    EFN89061.1    GBYB01011215    JAG80982.1    ADTU01024213    ADTU01024214    KQ762329    OAD55963.1    GEDC01008812    JAS28486.1    KQ434781    KZC04500.1    NEVH01013549    PNF28843.1    PNF28844.1    GEZM01036474    GEZM01036473    JAV82667.1    GEZM01036472    GEZM01036471    JAV82668.1    KQ971342    KYB27603.1    KYB27602.1    GEBQ01010674    JAT29303.1    KK855873    PTY24210.1    GECU01022160    JAS85546.1    KZ288204    PBC33280.1    GBBI01001874    JAC16838.1    GECZ01024558    JAS45211.1    GEBQ01010509    JAT29468.1    GECZ01025673    JAS44096.1    GECU01015092    JAS92614.1    GEDC01024722    JAS12576.1    KQ414614    KOC68807.1    CH480817    EDW50144.1    GDHF01017687    JAI34627.1    CM000159    EDW92933.1    LNIX01000009    OXA50446.1    CH954178    EDV50253.1    APGK01037934    KB740949    ENN77189.1    LNIX01000003    OXA58385.1    LJIG01022449    KRT80547.1    AE014296    AY051427    AAF47595.3    AAK92851.1    CM000363    CM002912    EDX08891.1    KMY96988.1    GBHO01038683    GBHO01038678    GBHO01036758    GBHO01036014    GBHO01033555    GBHO01033552    GBHO01005171    GBHO01004442    GBHO01000800    GBHO01000798    GBHO01000793    JAG04921.1    JAG04926.1    JAG06846.1    JAG07590.1    JAG10049.1    JAG10052.1    JAG38433.1    JAG39162.1    JAG42804.1    JAG42806.1    JAG42811.1    GDHC01013951    GDHC01007287    JAQ04678.1    JAQ11342.1    GBHO01038679    GBHO01038677    GBHO01038676    GBHO01038673    GBHO01038672    GBHO01035996    GBHO01033551    GBHO01019355    GBHO01000802    GBHO01000797    GBHO01000792    JAG04925.1    JAG04927.1    JAG04928.1    JAG04931.1    JAG04932.1    JAG07608.1    JAG10053.1    JAG24249.1    JAG42802.1    JAG42807.1    JAG42812.1    OXA50044.1    CH902618    EDV38741.1    CH479188    EDW40574.1    CH379069    EAL31083.2    GDHF01015827    JAI36487.1    GDHF01031440    JAI20874.1    LNIX01000002    OXA58926.1    JXJN01023005    JXJN01023006    OUUW01000009    SPP84877.1    CCAG010018755    CCAG010018756    CH964062    EDW78767.1    KQ438551    KOX67190.1    GL443286    EFN62266.1    ATLV01023033    KE525339    KFB48289.1    ACPB03008662    AXCN02000442    AXCN02000443    DS231815    EDS35124.1    AJWK01022836    AJWK01022837    AJWK01022838    AJWK01022839    AJWK01022840    AAAB01008960    EAA11888.4    APCN01000142    QOIP01000008    RLU19628.1    KK107031    EZA62128.1    RLU19285.1    KQ976528    KYM81828.1    RCHS01000245    RMX60097.1    NEVH01027063    PNF13988.1    PNF13986.1    KQ978457    KYM93850.1    KQ434856    KZC08682.1    KYB27604.1    EFA03651.2   

Proteomes

UP000053240    UP000218220    UP000007151    UP000283053    UP000005204    UP000000311    + More
UP000053105    UP000075809    UP000078542    UP000078492    UP000053097    UP000279307    UP000007755    UP000215335    UP000078541    UP000027135    UP000078540    UP000036403    UP000053825    UP000008237    UP000005205    UP000005203    UP000076502    UP000235965    UP000007266    UP000242457    UP000095300    UP000001292    UP000002282    UP000198287    UP000008711    UP000019118    UP000000803    UP000000304    UP000091820    UP000192221    UP000007801    UP000008744    UP000001819    UP000092460    UP000092443    UP000268350    UP000092444    UP000092445    UP000007798    UP000192223    UP000030765    UP000078200    UP000015103    UP000075886    UP000002320    UP000092461    UP000007062    UP000075903    UP000076407    UP000075840    UP000275408   

PRIDE

H9JBG5    Q961Q9   

Pfam

PF00474   SSF        + More
PF08447   PAS_3

Interpro

IPR001734   Na/solute_symporter        + More
IPR038377   Na/Glc_symporter_sf       
IPR001610   PAC       
IPR035965   PAS-like_dom_sf       
IPR000014   PAS       
IPR013655   PAS_fold_3       
IPR018212   Na/solute_symporter_CS       
IPR001202   WW_dom       
IPR036020   WW_dom_sf       
IPR023298   ATPase_P-typ_TM_dom_sf       

SUPFAM

SSF55785   SSF55785        + More
SSF51045   SSF51045       
SSF81665   SSF81665       

Gene 3D

1.20.1730.10    

CDD

cd00130  PAS
cd00201  WW

ProteinModelPortal

A0A194RC90   A0A2H1VGN3   A0A2A4JVV6   A0A212F6Y7   A0A3S2LFK1   H9JBG5   + More
E2AIX1   A0A0M8ZY87   A0A151X8Z7   A0A195CL10   E9JAQ7   A0A195DFZ3   A0A026X4I2   A0A3L8D8E8   F4X3I9   A0A232EIL3   A0A195EXC1   A0A067QP53   A0A195BN99   A0A0J7KVI8   A0A0L7R0N4   E2B5H5   A0A0C9RRN6   A0A158NRN5   A0A310SJQ4   A0A1B6DS39   A0A087ZNV2   A0A154P042   A0A2J7QJS2   A0A2J7QJT7   A0A1Y1MH80   A0A1Y1MCD1   A0A139WI01   A0A139WI19   A0A1B6M044   A0A2R7WYH9   A0A1B6IF30   A0A2A3ENK4   A0A023F6H1   A0A1I8PX36   A0A1B6F543   A0A1B6M0L6   A0A1B6F1B8   A0A1B6J094   A0A1B6CGF1   A0A0L7RCU1   B4HW29   A0A0K8V6R8   B4PE95   A0A226E1U3   B3NEY0   N6TA95   A0A226EL08   A0A0T6AZE2   Q961Q9   B4QN09   A0A0A9ZFM9   A0A146LXE4   A0A0A9ZC26   A0A226DZ22   A0A1A9W4N0   A0A1W4VVB7   B3M780   B4GS39   Q2M053   A0A0K8VCB8   A0A0K8U2A4   A0A226EQQ5   A0A1B0BZ70   A0A1A9YLR2   A0A3B0JRX9   A0A1B0G5R2   A0A1A9ZMT8   B4N328   A0A0M8ZM94   E2AWG6   A0A1W4WGZ1   A0A084WDJ5   A0A1A9UXU1   T1HZD6   A0A182PZH6   B0VZN2   A0A1B0CPY2   Q7Q6K4   A0A2C9H5N5   A0A2C9H889   A0A2C9GQ50   A0A3L8DIG3   A0A088AH95   A0A026X262   A0A3L8DFP4   A0A195BBB9   A0A3M6V2I6   A0A2J7PCD1   A0A2J7PCD0   A0A195BZT4   A0A154PA03   A0A139WI69   D6WJW9  

PDB

5NVA     E-value=0.0798893,     Score=77

KEGG

101740048    K14388 solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 | (RefSeq)

GO

GO:0016021   GO:0022857   GO:0016020   GO:0005215   GO:0006810   GO:0006388   GO:0009881   GO:0019226   GO:0042065   GO:0042066   GO:0003707   GO:0043565   GO:0055085  

Length:

77

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

40.38098

Exp number, first 60 AAs:

40.00718

Total prob of N-in:

0.79205

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  36

TMhelix

37  -  59

inside

60  -  77

 

 

Pi

288.718118

Theta

220.073406

Tajima's D

0.88858

CLR

0

CSRT

0.628168591570421

Interpretation

Uncertain