Gene

KWMTBOMO05700  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006859

Annotation

mitochondrial_NADH:ubiquinone_oxidoreductase_ESSS_subunit?_putative_[Papilio_xuthus]

Location

Bomo_Chr10(+):8521022-8521702      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.476

CDS

ATGGCCGCTTTGATAAAACTACGCCATATGCCCTTAGTGCAAAGAAGCGTTTGGAATCATTTCAACAAAGTAAGTCGGAATATTTCCACCTCTAAAAAGAACAGCGACACCGCCACAACTGCTTGTGAGACCAAAACAGAAGATAAGAACTGGGTTAGCTACGGTTTTGACTATACGAGCAAAGAAGAAGACACTAATGCCCATCACGCCACCTTTTTCTTTTCTGTAACATTATGTATTGTTTTTGGTGGTGTCTGTTGGGCCTATTCTCCCGATGTACACATGAGGGACTGGGCTCAGCGTGAAGCATTTTTGGAATTAAGACGTCGTGAAAAAGCAGGTCTTCCACCGATCAGTCCCAACTTTATTGATCCCAAACTTATAAAGCTGCCTGATGAATCCGAGTTGTGTGATGTTGAAATAATCATCTAA

Protein

MAALIKLRHMPLVQRSVWNHFNKVSRNISTSKKNSDTATTACETKTEDKNWVSYGFDYTSKEEDTNAHHATFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLELRRREKAGLPPISPNFIDPKLIKLPDESELCDVEIII

Uniprot

H9JBG4   I4DK86   A0A194RBW0   A0A0L7LTQ9   A0A212F6X2   A0A2A4JX06   + More
A0A2H1VIK0   S4PGP5   A0A067RH50   A0A182HAJ3   A0A2J7Q8H0   A0A0K8TPL1   A0A2M3Z6C9   A0A2M4C2E0   W5JJY1   A0A2M4C2D9   T1DFD6   A0A182VAH5   B4QTW2   A0A2M4AJS5   A0A0C9QRN3   A0A034VJH8   A0A182IK98   A0A182KIG7   A0A1L8EF04   A0A0L0CB83   A0A336L4P8   A0A182I347   A0A023EFY4   A0A084VD60   B4ILV7   A0A1I8MQN3   B4PMQ8   A0A182PQL2   A0A182TDQ3   A0A1I8P0Z4   A0A1Y9J0G2   A0A182KR52   A7URF1   A0A182XYQ0   B3P382   Q0IEU1   A0A182Q0I3   A0A1A9YUG3   B4MBW3   A0A182FDE3   A0A1Q3FYR9   W8CE99   J9K6Q7   Q9V3L7   A0A182MS06   B3LVB5   A0A1A9UJX9   B4K5Z1   A0A1Y9IWE2   A0A1W4UAV7   A0A1B0C382   A0A1B0DJQ5   A0A1A9W6P5   V5GV76   B4JYK5   A0A182NI19   B4NHZ0   Q29BT2   A0A1L8E937   B4GPP1   A0A182R7B6   A0A0N7ZDC2   U5EES5   A0A0A9WSU8   A0A1B0CV98   A0A1A9XN11   A0A1L8DZQ3   A0A1J1IB52   A0A2P8YJT3   A0A151XDY3   A0A1W4WQC4   T1I5A7   A0A069DNU3   R4WTB3   N6SYZ1   A0A1S3DAV6   A0A195DW01   A0A1B6CJL6   A0A1Y1JWN2   A0A0J7KT58   A0A2T7NUR1   A0A0M9ACY3   A0A158NWV3   A0A2A3E6R9   A0A195F5A2   F4X4F9   A0A2R7VVS7   A0A0L7QXD1   T1ERM6   E2BBS0   E1ZWY6   A0A154NZ72  

Pubmed

19121390    22651552    26354079    26227816    22118469    23622113    + More
24845553    26483478    26369729    20920257    23761445    17994087    25348373    26108605    24945155    24438588    25315136    17550304    20966253    12364791    14747013    17210077    25244985    17510324    24495485    10858562    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    25401762    26823975    29403074    26334808    23691247    23537049    28004739    21347285    21719571    23254933    20798317   

EMBL

BABH01030874    AK401704    KQ459606    BAM18326.1    KPI91471.1    KQ460398    + More
KPJ15087.1    JTDY01000103    KOB78850.1    AGBW02009960    OWR49496.1    NWSH01000473    PCG76174.1    ODYU01002761    SOQ40658.1    GAIX01006120    JAA86440.1    KK852473    KDR23102.1    JXUM01122788    KQ566643    KXJ69952.1    NEVH01016952    PNF24875.1    GDAI01001527    JAI16076.1    GGFM01003328    MBW24079.1    GGFJ01010314    MBW59455.1    ADMH02001280    ETN63210.1    GGFJ01010313    MBW59454.1    GAMD01003176    JAA98414.1    CM000364    EDX12385.1    GGFK01007693    MBW41014.1    GBYB01003292    JAG73059.1    GAKP01015511    GAKP01015507    GAKP01015504    GAKP01015500    GAKP01015496    GAKP01015492    GAKP01015483    GAKP01015480    JAC43456.1    GFDG01001630    JAV17169.1    JRES01000657    KNC29480.1    UFQS01001990    UFQT01001990    SSX12886.1    SSX32328.1    APCN01000197    GAPW01005346    JAC08252.1    ATLV01011185    KE524650    KFB35904.1    CH480892    EDW55433.1    CM000160    EDW95978.1    AAAB01008807    EDO64594.1    CH954181    EDV48534.1    CH477478    EAT40260.1    AXCN02000387    CCAG010023983    CH940656    EDW58584.1    GFDL01002375    JAV32670.1    GAMC01000566    JAC05990.1    ABLF02017094    AF170829    AE014297    AY047546    KX531571    AAD49739.1    AAF55625.1    AAK77278.1    ANY27381.1    AXCM01000608    CH902617    EDV43647.1    CH933806    EDW16228.1    JXJN01024853    AJVK01035127    GALX01002889    JAB65577.1    CH916377    EDV90767.1    CH964272    EDW83640.1    CM000070    EAL26915.1    GFDG01003674    JAV15125.1    CH479186    EDW39124.1    GDRN01045575    JAI66840.1    GANO01004185    JAB55686.1    GBHO01033108    GBRD01014320    GDHC01012365    JAG10496.1    JAG51506.1    JAQ06264.1    AJWK01030327    GFDF01002131    JAV11953.1    CVRI01000043    CRK96206.1    PYGN01000545    PSN44502.1    KQ982254    KYQ58586.1    ACPB03022603    GBGD01003394    JAC85495.1    AK417962    BAN21177.1    APGK01051594    KB741194    ENN72989.1    KQ980304    KYN16739.1    GEDC01023622    JAS13676.1    GEZM01102783    GEZM01102782    JAV51795.1    LBMM01003520    KMQ93429.1    PZQS01000009    PVD24903.1    KQ435687    KOX81326.1    ADTU01028641    KZ288364    PBC26859.1    KQ981820    KYN35352.1    GL888644    EGI58669.1    KK854039    PTY10035.1    KQ414705    KOC63265.1    AMQM01000843    KB096742    ESO02315.1    GL447151    EFN86846.1    GL434909    EFN74326.1    KQ434783    KZC04976.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000037510    UP000007151    UP000218220    + More
UP000027135    UP000069940    UP000249989    UP000235965    UP000000673    UP000075903    UP000000304    UP000075880    UP000075881    UP000037069    UP000075840    UP000030765    UP000001292    UP000095301    UP000002282    UP000075885    UP000075902    UP000095300    UP000076407    UP000075882    UP000007062    UP000076408    UP000008711    UP000008820    UP000075886    UP000092444    UP000008792    UP000069272    UP000007819    UP000000803    UP000075883    UP000007801    UP000078200    UP000009192    UP000075920    UP000192221    UP000092460    UP000092462    UP000091820    UP000001070    UP000075884    UP000007798    UP000001819    UP000008744    UP000075900    UP000092461    UP000092443    UP000183832    UP000245037    UP000075809    UP000192223    UP000015103    UP000019118    UP000079169    UP000078492    UP000036403    UP000245119    UP000053105    UP000005205    UP000242457    UP000078541    UP000007755    UP000053825    UP000015101    UP000008237    UP000000311    UP000076502   

PRIDE

H9JBG4    Q9V3L7   

Pfam

PF10183   ESSS        + More
PF04495   GRASP55_65
PF00226   DnaJ

Interpro

IPR019329   NADH_UbQ_OxRdtase_ESSS_su        + More
IPR024958   GRASP55/65_PDZ       
IPR007583   GRASP55_65       
IPR036034   PDZ_sf       
IPR001623   DnaJ_domain       
IPR036869   J_dom_sf       
IPR036671   Znf_DHP_sf       

SUPFAM

SSF50156   SSF50156        + More
SSF46565   SSF46565       

Gene 3D

1.10.287.110     3.10.660.10    

CDD

cd06257  DnaJ

ProteinModelPortal

H9JBG4   I4DK86   A0A194RBW0   A0A0L7LTQ9   A0A212F6X2   A0A2A4JX06   + More
A0A2H1VIK0   S4PGP5   A0A067RH50   A0A182HAJ3   A0A2J7Q8H0   A0A0K8TPL1   A0A2M3Z6C9   A0A2M4C2E0   W5JJY1   A0A2M4C2D9   T1DFD6   A0A182VAH5   B4QTW2   A0A2M4AJS5   A0A0C9QRN3   A0A034VJH8   A0A182IK98   A0A182KIG7   A0A1L8EF04   A0A0L0CB83   A0A336L4P8   A0A182I347   A0A023EFY4   A0A084VD60   B4ILV7   A0A1I8MQN3   B4PMQ8   A0A182PQL2   A0A182TDQ3   A0A1I8P0Z4   A0A1Y9J0G2   A0A182KR52   A7URF1   A0A182XYQ0   B3P382   Q0IEU1   A0A182Q0I3   A0A1A9YUG3   B4MBW3   A0A182FDE3   A0A1Q3FYR9   W8CE99   J9K6Q7   Q9V3L7   A0A182MS06   B3LVB5   A0A1A9UJX9   B4K5Z1   A0A1Y9IWE2   A0A1W4UAV7   A0A1B0C382   A0A1B0DJQ5   A0A1A9W6P5   V5GV76   B4JYK5   A0A182NI19   B4NHZ0   Q29BT2   A0A1L8E937   B4GPP1   A0A182R7B6   A0A0N7ZDC2   U5EES5   A0A0A9WSU8   A0A1B0CV98   A0A1A9XN11   A0A1L8DZQ3   A0A1J1IB52   A0A2P8YJT3   A0A151XDY3   A0A1W4WQC4   T1I5A7   A0A069DNU3   R4WTB3   N6SYZ1   A0A1S3DAV6   A0A195DW01   A0A1B6CJL6   A0A1Y1JWN2   A0A0J7KT58   A0A2T7NUR1   A0A0M9ACY3   A0A158NWV3   A0A2A3E6R9   A0A195F5A2   F4X4F9   A0A2R7VVS7   A0A0L7QXD1   T1ERM6   E2BBS0   E1ZWY6   A0A154NZ72  

PDB

6G72     E-value=1.8452e-10,     Score=152

KEGG

101739775    K11351 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 11 | (RefSeq) NADH dehydrogenase [u

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005747   GO:0022904  

PANTHER

PTHR13327   PTHR12893  

Length:

143

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.28008

Exp number, first 60 AAs:

0

Total prob of N-in:

0.50416

outside

1  -  66

TMhelix

67  -  89

inside

90  -  143

 

 

Pi

4.076146

Theta

11.695287

Tajima's D

-1.931811

CLR

245.284992

CSRT

0.0143992800359982

Interpretation

Possibly Positive selection