SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05694  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006855
Annotation
PREDICTED:_dehydrogenase/reductase_SDR_family_protein_7-like_[Amyelois_transitella]
Full name
Dehydrogenase/reductase SDR family protein 7-like      
Location in the cell
Mitochondrial   Reliability : 2.412
 

Sequence

CDS
ATGTACGGGGTAATTAATCATCTTCTTCAAAAGAAAAGGAGATCAACGTTACGAGGAAAGGTGGTCTTAATTACTGGTGCAAGCTCTGGTATTGGGGAGGCACTGGCTCATGTATTTTATGGACAGGGCTGTAAAATTATCCTTGCTTCTCGGCGGAAAAGAGAACTCGAAAGAGTTAAACAGGATCTGATATCCAGGAAAGTTGCCATCCAAACTCTTGAACCAGTTGTTTTGGAGTTAAATTTAGCGGACATAGATAATATGTATTTGTTTGTGGAGAAAGTGTACGGGATATGTGGTCACGTTGACATTTTAGTCAATAATGGCGGTGTCACTCATAGAGGATCTATTTTAAACACTAAAACTGATGTTGATCAGAAAATTATGTTTATCAATTACTTCGGGTCAGTAGCATTGACAAAGGCTGTACTACCGAAAATGATAGAAAGAAAATCTGGGCATGTCGTATTTAATAGTTCTGTGCAAGGACTAATTTCCATACCTAATCGTTCAGCTTATGCTGCATCCAAGCATGCTCTACAAGCTTTTGGTGACTGTCTTCGTGCTGAGATGGATCAGTACGGTATTAATGTTACTGTTGTTAGCCCAGGGTATATAAAAACAGCTATATCAATGAACGCTTTCACCGGATCTGGTGACACTCATGGTGTTATGGATGCCACCACAGCGAAAGGTTTCACACCGGAATATACAGCGAACAAAATATTAGACGCGGTTGTTAATAAAAAAAATGAACTAATACTAAGCCAGTTTCTACCTAGATTTGCCATATTTTTGAGACACACATTTCCATCATTGTATTTTACGATTATGGCAAAAAGAGCGAACGAAACCTGA
Protein
MYGVINHLLQKKRRSTLRGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTKAVLPKMIERKSGHVVFNSSVQGLISIPNRSAYAASKHALQAFGDCLRAEMDQYGINVTVVSPGYIKTAISMNAFTGSGDTHGVMDATTAKGFTPEYTANKILDAVVNKKNELILSQFLPRFAIFLRHTFPSLYFTIMAKRANET

Summary

Description
Putative oxidoreductase.
Similarity
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Keywords
Complete proteome   Membrane   NAD   NADP   Oxidoreductase   Peroxisome   Reference proteome   Signal-anchor   Transmembrane   Transmembrane helix  
Feature
chain  Dehydrogenase/reductase SDR family protein 7-like
EC Number
1.1.-.-
EMBL
BABH01030861    NWSH01000646    PCG75052.1    GAIX01003609    JAA88951.1    ODYU01012985    + More
SOQ59567.1    AGBW02012455    OWR45027.1    KQ460398    KPJ15097.1    KQ459606    KPI91480.1    JTDY01000870    KOB75606.1    GEDC01022351    JAS14947.1    KQ971343    EFA03099.1    KQ414582    KOC70882.1    CH954182    EDV53192.1    GEZM01049898    JAV75774.1    APGK01040850    KB740984    ENN76299.1    KB631899    ERL86945.1    LJIG01009469    KRT83018.1    KK853080    KDR11690.1    ADTU01011939    KZ288198    PBC33669.1    JR039437    AEY58703.1    GL436181    EFN72306.1    CH902623    EDV30569.1    AJVK01033643    CM000160    EDW98262.1    CM000364    EDX14885.1    GL764129    EFZ18513.1    KQ982490    KYQ55773.1    OUUW01000007    SPP82908.1    CH933806    EDW16245.1    JXJN01017678    AE014297    AF145631    KQ976396    KYM92973.1    AXCM01003247    JXUM01049886    KQ561625    KXJ77964.1    AXCN02002327    GL888417    EGI61292.1    GAPW01002470    JAC11128.1    CH480819    EDW53394.1    GBXI01016891    GBXI01016743    JAC97400.1    JAC97548.1    CM000070    EAL26908.2    CH479186    EDW39117.1    KQ977408    KYN02927.1    CP012526    ALC48056.1    ATLV01018617    KE525239    KFB43271.1    GAMC01012504    JAB94051.1    GDHF01032286    JAI20028.1    CH940652    EDW59003.2    CVRI01000054    CRL00369.1    GGFK01012358    MBW45679.1    DS232027    EDS32423.1    AAAB01008960    KQ978691    KYN29187.1    GAKP01005293    GAKP01005290    JAC53662.1    GECZ01028139    JAS41630.1    CH916377    EDV90784.1    GGFJ01008302    MBW57443.1    ADMH02000483    ETN66284.1    APCN01004290    GDAI01000234    JAI17369.1    AAZX01001115    AAZX01001121    AAZX01004158    AAZX01016586    ABLF02019394    NNAY01003277    OXU19694.1    GANO01002052    JAB57819.1    GGMR01005504    MBY18123.1    GL450552    EFN80815.1    KQ981727    KYN36986.1    GFXV01005696    MBW17501.1    GGLE01002152    MBY06278.1    CH964232    EDW81171.1    KK107088    EZA59786.1    LBMM01004296    KMQ92594.1    JRES01001623    KNC21444.1    QOIP01000008    RLU19419.1    JH431501    GBHO01031806    GBHO01031805    GBHO01031804    GBRD01014039    GBRD01014038    GBRD01014037    GBRD01014036    GDHC01010280    JAG11798.1    JAG11799.1    JAG11800.1    JAG51787.1    JAQ08349.1    GFDL01011310    JAV23735.1    GANP01006360    JAB78108.1   
Pfam
PF00106   adh_short
Interpro
IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       
SUPFAM
SSF51735   SSF51735       
PDB
3OEC     E-value=2.7351e-21,     Score=250

Ontologies

Topology

Subcellular location
Peroxisome membrane  
Length:
285
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.44175
Exp number, first 60 AAs:
18.81947
Total prob of N-in:
0.87058
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  285
 
 

Population Genetic Test Statistics

Pi
268.488145
Theta
196.127415
Tajima's D
0.133859
CLR
0.372229
CSRT
0.404079796010199
Interpretation
Uncertain
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