Silkworm Genome Informatics Database

Gene

KWMTBOMO05691

Pre Gene Modal

BGIBMGA006853

Annotation

UPF0505_protein_C16orf62-like_[Papilio_machaon]

Location

Bomo_Chr10(+):8252172-8275277 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.918

CDS

ATGATTTGCAAAGCACTTAAATTTGAAGTCTCTCATCATCCTCTGAAGACAAATCATGTACTTTTTAAAAAAATCTCAAACAAAGGCTTCATTGATGACTTGAGTAAATGGAGTGCTGGCTTTGAAGAAATAGATCCACTGCTTAAGTTTGAACAGATGGCTTTAGATGAAGATCTTGTTCATGCTGACGATGAGGGTATAGGGGTAAATTATGCAAAAGAATGGAATACAAAACGTACAATAGTCCTCAATAGATACACAACTGGAGAGAAGCTAACAATAGTCAGTAGTTTTTTGCCTGGTGGTGAGAAAACCCTCATAAGACAGGTTTCAAATTTGAACGAAAAAGTTAAAAATAGACTGGAGCAATTGGATGATTTTGATGATGATTCAGTGAGGAAAACAATGGGTTTGAGCCAACAAGAATTTGTTACCAAAATAAATATGTTGAATGATGAAATTAAGAAGGCATGGGAGTCTGAGCAAAGAGTTAAAGCTTTTAAAATAGGGATCCAATGTTCCAAGCTACTGTCAGATGTTAATGTCATGCACTTTTATCCGAGCAAGTTCATTCTCATCACCGATATCCTGGACACATTCGGTAACTTAGTCTTCGATAGGCTCTGTGAAAAAAGTTTTGGGCAAAAGCTTGTGAAGCCTGTTCAGGATATCAACCCGAAGGAAGTGCCGGAAACGGCGAGAGAAACCTGTCAGAACTGGTTGTATAAGATGGCATCGATTAGAGAGCTTCTGCCGCGCCTTTACATGGAGATGGCTCTGTTGAAATGCTACTCGTTTACATCGAAAGAGGAAATAAAACCGACAATCGTGAGACTGACTGCGATGATCAGAGGGATAGGAAATCCCTTAGTTGCGATCTATTTAAGGGCATACCTCTGTAAGGTGGCGTCTAAATTATTAGGAAACGAGTGCTCTGATTATTTTTATGAAAATTTGAAGGAATTTATTGAGGAGTATCAACAGGTTTATCATGTGGCCATGAAAAAGAAATACGAAGGACAATTACTTACCTTAGATAAATATTTAAACATTTACATGCCGGCCGTTGATTGGCTGTTTTTTGGAACTTTGCATTCTACCAACTGCAAGGAAACACTTTTGGATCAAATGCTTCAACAATGTCAGAAAATGCAAAACAATGAATTGCTCCTGTGTGGTATTCTGTCTGCATTTGATTCGAAAATTATAATTAAAAGGTCTACAAAAATACTAGATATGATTGTGGAATCTGCCGATAAAATGGTACTGGTCCATGACGTGTTGACTTCGCTCGGCGAACATTTATGTGCGTCGGAAAACTGCCGACAAGTCAATTCAGAGACACTGATTCAAACTTGGTGGAAGATAGCCAGCAACATAAGGTCTACTGTGCACTTTTTGCAAGTTTTGGGACCGTGGCTACAATTCGCTTGTACAAATTTATCGACCCAGCATGTGAATATAATTCTGCGTGGAACAATACGTTACCTGATCAAGTGCGGGAAATCGGCTGACGAATTTTCCGGCAACTTACAGATTGTCATCAAAAGGATGCTCGGATCAGTTCCGGACATCGAGGAATGTTTTCTGATGGATGCGTTTATGCCGCTCATAGAATTGGTACAGACGACGAACGCACGTACCTTAATGGCGAAAACGGTGTTGTCAACGTTCTTTACGCGGTATAACTCTCTTCACATCGACGACCATATTGTTATAACCTCACTGATGTGCCTCTGCTGCACCCTCCACGATTCCATAAATGCTATAACGGTAGATGATGAAATAAAAGTGTGCAGCGAACTCATAAACAAGTTCGTCCACGCGGGCACGTTCCACGACGACTTCGAGCAGCAGTTGAACTTCTACGTGGAATGTAGATCCTCCTTCATTAAACTCGACGCTGTACTCGTTGCTCTAGTGCAGAAGGTAAATGGTTTAGCGATACGTGCCGGCGACGCACGGAACAAATGGCTGCAGAGGGCGTGTGCGGCTTATTGCTACATCACGGTCCCTTCTCTGCACTGCACCATCACTAAGGCACAGCTGTACCTGCTCTCTGGACAAGTCGCCTTGCTCAACAACTGCATTGGACAAGCGGAAGCAAATTTTAAATCCCTCATAGGCTTGATACCAGATATTCCGGAGTACATTCTAGAAGACGGACAAAAAAAATCAACCAATGTCAAAGTTGAAGGAATATTGCGCGATTTCTTATCCACACTTCTTGTTTTGCCGGACAACGTGGACAGTAACTGCAAAGCGTACATACTGAGCGGACTGATCAAGACAATGGAGAGGGTGCACTGGCGTAAAACGGACCCGCGCTACTACAACACGCTTTTGAACATTCTAGATCTGCTCAGCGAAATGGCGCAGGAGGATTACGCACATCACATCGATTCCGTTCTATCAAACGACAAGCTGTATGGTTGCGACGAGGAATTCGTTTCGGTCTTAGACGGGTATGCGACGGACATATGCCAGGAGTTGCTCGTGGTACTGAAAGCGCTCGGCGACAACAAAGAGACAAAGAAACAGTACAATTTGACGTTGGAATTATTCTGGCGCGTGATAAGACGCGCCGATTTAGAACAACATTCCATGCTCACTTTAGCGGCCAACTTGTGGATGCTTTCAAAGAAAATACAAGATCCCAATAATAAACTCGCAAAAAGCATTCTTTCCGCGCTACGCACCTCTGAAGATCTCGCAAGTCGACAGCTGCTCGAGAAGTTAGAACAAGGTTTATTCATTTGGACGATATTTGAAGGTATTTTTGCCAGCGAAGAAAAAAATGGATTTGTGCAACCATTGGACTTTGGAGCAATATTTGATTCTGCAGATGGTGGCATAACTTCCTTGGCTTCGAACCCTTTAGCAGCAGCGGTGCTTAAAGTAGATAAGAGTCAATATCCTCAGTTATTTGACACTGTTGTCAGTAGTTCTATTGATTCTTTGCAAACTCGATTAGCACCAGGAGAAAATGCATTTTCAGCCCAACATTTTGGCTTTAATCCAATTGCCAGTCAAAGCTTTTTTTCACCAGCGAGATCCGCTAAATTAGTTGCACAACCACCGCAGCACCGAGCACAGGCGGTACCTATTGGACAACAATTAGGTTCTTTAAGATATGACATACGCACTGTACACGATGCTGACTACAAAGTATATAAACCAGAGGAAAATGAACAAGGAGAAGAAATTTTAGCGGCATTAAAAAAAAACCCTTCCGTAGCTGCTTATTTTCAACCAGCCACAACGAATGTTGAAGTTTCACATCCGATAAAATACCGTAAAGAAGAAGTTGATGATGATACCGATCTTGAACAAAACTACAAGCCTAATGCTTATATTACAGGACCAGCACGTATTCGACGATATACAAGTGGGAGACAAAGAGAAAATTTAAGAAAAAATAGCGAGGAAGAGGAAGATCCATATAGTTATAAAGTTGAATATAATTCCAAACCTAAAGCTTTCGATAGTGACCTGTATAGCAGTGCATATAAAGAAGAGAAAAACCCAAAGAAAGACTACGAATACCCTTACGGATATGACTCTGGGTATGACCATAAAGAATACGAGCGCATAAAAGCTTTATCAGAGAAACAAGCCGCTGAAATAAAACAAAACCCAGAAAATTGTCAAGAAGTTAAAAAAGATGGTATGTCTTGCATGTCTTGTAAAGACCCAAAAACAGGTGGAAATTATGAATCCTGTTCATATGTCGCAGAACCAAAAAATAATAAATATGCGTATTCAAAAGAGAGAAAGTTTGATAGTAACGACGAACCCGATGAACCAGAAAGTGATGAAAAAGTTGAACAACCCAAAAAGTCTGCTAAATATCAGGATGCTGACAAAAAAGAAACCCAAAAGTATGCAAAATTAACGGCATCACAACCTGAGAAACCGTACAGCGACTATAAATCGCAAAACAAAGATGACGATAATTCTGGCGAAAAATACAAGTCTTATTACGTCCATAATTCCAAACCAAGACCAAACGAGGCCCTGAGAGCTGCTGACGATGATAGTTCATCAAAAGAAGAAACTGAGTCTGTAGCTAAACCCTATGACTATAAAAAAGCATTGCCAGGTTTTTATACCGAAAATGAACCAAAAAAAGATGTAGAGCATGTTCTAGCCGAGTTTAAGAAAAAAGATCGATCTTCGTGTAAGAGGGTGCAGAAGAATGGCATGACTTGTTTCCAATGCATAGATAAGTCAGGACTTAAGAATGAAGAGTGTATGTTTGTGTCAGAATCTGCTCCTAAGAGGAGTCATTTAGCATACCAGGAAGTAAAGGAATTCACTTCCAAGCCTGCTACGATAGAAAAAGGACAAGAAGGCGCCGAAAGTCAAACAATTACCACTAGTGCCCCCGCTGTACAAAAATTAGCTGCTTACGTTGTTGAAAATAATAATTATGGTAAAAAATTAAAACGTAAGAAGGCTCCTCAAGCGATAGTCCCAGCTGCAGCAAATCCTGCTCAAGTAACAGTTCCTGCTGTAGGAACTGCAATACAGTCTCCAAATACGAAAAAGTCAAAACGCAGCATTGAGGCCGTAGCTGAATCTAAAGCGACTATTGTTGATCTTACAAATGTAGCGGCTCCTGAAGAATTTGCCGGCGTTGACTCAAAGGGTGCATTTTGGTCCGAAACTTTGCCAAGATATAGTGCTACACTAGGCGTCACTTTACCTGAATTTATGTTGACAAGGTCAGAACATGAAGCATCTTTTGACGAAATTGTTGCAGGAGCGTAA

Protein

MICKALKFEVSHHPLKTNHVLFKKISNKGFIDDLSKWSAGFEEIDPLLKFEQMALDEDLVHADDEGIGVNYAKEWNTKRTIVLNRYTTGEKLTIVSSFLPGGEKTLIRQVSNLNEKVKNRLEQLDDFDDDSVRKTMGLSQQEFVTKINMLNDEIKKAWESEQRVKAFKIGIQCSKLLSDVNVMHFYPSKFILITDILDTFGNLVFDRLCEKSFGQKLVKPVQDINPKEVPETARETCQNWLYKMASIRELLPRLYMEMALLKCYSFTSKEEIKPTIVRLTAMIRGIGNPLVAIYLRAYLCKVASKLLGNECSDYFYENLKEFIEEYQQVYHVAMKKKYEGQLLTLDKYLNIYMPAVDWLFFGTLHSTNCKETLLDQMLQQCQKMQNNELLLCGILSAFDSKIIIKRSTKILDMIVESADKMVLVHDVLTSLGEHLCASENCRQVNSETLIQTWWKIASNIRSTVHFLQVLGPWLQFACTNLSTQHVNIILRGTIRYLIKCGKSADEFSGNLQIVIKRMLGSVPDIEECFLMDAFMPLIELVQTTNARTLMAKTVLSTFFTRYNSLHIDDHIVITSLMCLCCTLHDSINAITVDDEIKVCSELINKFVHAGTFHDDFEQQLNFYVECRSSFIKLDAVLVALVQKVNGLAIRAGDARNKWLQRACAAYCYITVPSLHCTITKAQLYLLSGQVALLNNCIGQAEANFKSLIGLIPDIPEYILEDGQKKSTNVKVEGILRDFLSTLLVLPDNVDSNCKAYILSGLIKTMERVHWRKTDPRYYNTLLNILDLLSEMAQEDYAHHIDSVLSNDKLYGCDEEFVSVLDGYATDICQELLVVLKALGDNKETKKQYNLTLELFWRVIRRADLEQHSMLTLAANLWMLSKKIQDPNNKLAKSILSALRTSEDLASRQLLEKLEQGLFIWTIFEGIFASEEKNGFVQPLDFGAIFDSADGGITSLASNPLAAAVLKVDKSQYPQLFDTVVSSSIDSLQTRLAPGENAFSAQHFGFNPIASQSFFSPARSAKLVAQPPQHRAQAVPIGQQLGSLRYDIRTVHDADYKVYKPEENEQGEEILAALKKNPSVAAYFQPATTNVEVSHPIKYRKEEVDDDTDLEQNYKPNAYITGPARIRRYTSGRQRENLRKNSEEEEDPYSYKVEYNSKPKAFDSDLYSSAYKEEKNPKKDYEYPYGYDSGYDHKEYERIKALSEKQAAEIKQNPENCQEVKKDGMSCMSCKDPKTGGNYESCSYVAEPKNNKYAYSKERKFDSNDEPDEPESDEKVEQPKKSAKYQDADKKETQKYAKLTASQPEKPYSDYKSQNKDDDNSGEKYKSYYVHNSKPRPNEALRAADDDSSSKEETESVAKPYDYKKALPGFYTENEPKKDVEHVLAEFKKKDRSSCKRVQKNGMTCFQCIDKSGLKNEECMFVSESAPKRSHLAYQEVKEFTSKPATIEKGQEGAESQTITTSAPAVQKLAAYVVENNNYGKKLKRKKAPQAIVPAAANPAQVTVPAVGTAIQSPNTKKSKRSIEAVAESKATIVDLTNVAAPEEFAGVDSKGAFWSETLPRYSATLGVTLPEFMLTRSEHEASFDEIVAGA

Uniprot

A0A194RH25 A0A212EU59 A0A2A4JSN5

Pubmed

26354079 22118469

EMBL

KQ460207 KPJ16625.1 AGBW02012455 OWR45030.1 NWSH01000646 PCG75055.1 + More

Proteomes

UP000053240 UP000007151 UP000218220

Pfam

PF04117 Mpv17_PMP22 + More
PF03635 Vps35

Interpro

IPR007248   Mpv17_PMP22        + More
IPR029705   VPS35L
IPR005378   Vps35

ProteinModelPortal

A0A194RH25 A0A212EU59 A0A2A4JSN5

KEGG

101738699 no KO assigned | (RefSeq) UPF0505 protein C16orf62

GO

GO:0005829 GO:0016021 GO:0015031 GO:0030906 GO:0042147 GO:0008565 GO:0030904 GO:0003677 GO:0004725 GO:0004887 GO:0043401 GO:0003707 GO:0043565

PANTHER

PTHR13673

Length:

1590

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0619600000000002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00141

outside

1 - 1590

Pi

241.413901

Theta

176.806667

Tajima's D

1.699059

CLR

0.223155

CSRT

0.826758662066897

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics