Gene

KWMTBOMO05683  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006849

Annotation

PREDICTED:_protein_RER1_[Amyelois_transitella]

Location

Bomo_Chr10(+):8165422-8174740      View in EpiBrowser

Full name

Protein RER1      

Location in the cell

PlasmaMembrane   Reliability : 4.284

CDS

ATGATGGACGGAAATGATTTATCTTCTGAAATTACAAGAAAAGGAATATTGTCTCAAGGTTGGACACGAATATCGCAGGTTTATCAGAGTACATTAGACAGATGGACCCCTCACGCAAAGACACGGTGGGTTGGAAGTGCCTTGGTCATGGCTGCATTTATTATCCGCATAATTACTAAACAAGGATGGTATATTGTCACATATGCGTTGGGTATTTACCATTTAAACTTGTTCATTGCATTCTTAACGCCGAAAATTGATCCTGCTATGGATTTAGATGATGATGAAAACGGACCTGCATTACCTACCAGAGCTAGTGAAGAATTTAGACCATTCATTAGACGGTTACCAGAATTCAAGTTTTGGCTGTCCGTTACCAAAAGCACTTTAATAGCTTTCTGCTGTACTTTTGTGGATGCTTTCAATATTCCAGTATTTTGGCCTATTCTAGTTATGTATTTCATAACATTATTTTGTATTACTATGAAGAGACAAATCAAGCATATGATCAAATACAGATATCTGCCATTTACACACAACAAACCAAAGTATAGAAATGCAGATTCTACAGTAACAGTGAACTGA

Protein

MMDGNDLSSEITRKGILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIITKQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEFKFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRQIKHMIKYRYLPFTHNKPKYRNADSTVTVN

Description

Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.

Similarity

Belongs to the RER1 family.

Uniprot

A0A1E1WF01   A0A2A4K0S8   A0A194QMB3   I4DJJ4   A0A2H1VH83   S4PWX4   + More
A0A3S2M9B6   A0A1W4X9J9   D6X1A4   A0A212EJL2   H9JBF4   A0A158NUW8   A0A195FPQ6   A0A3L8DFI4   A0A151WSV8   A0A336KQT1   A0A1W4X9B4   T1DF64   A0A151IRM5   A0A1Q3G3N1   A0A1Y1LLW8   A0A0K8TPZ6   Q16T78   A0A023EIL2   A0A182HD55   A0A1L8DUM1   A0A182RMQ7   A0A2M4AHY7   W5JML6   A0A182FVT0   A0A1J1INH3   T1E7W4   A0A2M3Z443   A0A182K8S4   A0A182QPE7   A0A154PEL8   A0A2M4AI32   A0A182N9Q2   A0A182YBQ4   F4X5Q3   A0A0L7QZ26   A0A2A3EN73   A0A0L0CIW1   A0A182VDM2   A0A182THS1   A0A182XFQ5   Q7PV51   A0A088ACJ9   A0A0M8ZX57   A0A195BVP6   V9II70   A0A067RF06   A0A0T6AWC6   A0A1E1WZG3   A0A1L8EDQ9   K7IQB4   A0A0A1WTX4   A0A182W258   A0A0A1X6Q9   A0A1B6H3K5   A0A1B6J3N2   A0A023FFB6   A0A182PK95   A0A182M3J2   A0A1B6HPL7   A0A1B6J5N7   A0A1B6FB04   A0A1B6JGA0   W8AVN9   B4PUA2   B3P6N6   A0A1I8M807   A0A182J6H5   A0A232F1M6   A0A224YZ84   A0A131YT23   A0A224YQT7   A0A131YDD2   B3LWJ5   B4QUR7   B4IJJ4   A0A1W4V8T7   Q9VBU6   Q296L6   B4GEZ8   A0A1I8NPS6   A0A140SRF8   U5EGZ4   E0VVP4   A0A0A9WKS1   A0A3B0KGW0   A0A131XPV6   A0A1B0ESB4   B4M5G1   A0A0K8VDM6   A0A034VJ28   A0A0M4EL41   A0A0A9ZEI7   B4JSL5   A0A0K8W1Q3  

Pubmed

26354079    22651552    23622113    18362917    19820115    22118469    + More
19121390    21347285    30249741    24330624    28004739    26369729    17510324    24945155    26483478    20920257    23761445    25244985    21719571    26108605    12364791    14747013    17210077    24845553    28503490    20075255    25830018    24495485    17994087    17550304    25315136    28648823    28797301    26830274    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    20566863    25401762    28049606    25348373   

EMBL

GDQN01005547    JAT85507.1    NWSH01000315    PCG77518.1    KQ461198    KPJ06095.1    + More
AK401462    KQ459606    BAM18084.1    KPI91493.1    ODYU01002544    SOQ40186.1    GAIX01006033    JAA86527.1    RSAL01000008    RVE53923.1    KQ971372    EFA10599.2    AGBW02014440    OWR41679.1    BABH01030843    BABH01030844    BABH01030845    ADTU01026803    KQ981335    KYN42575.1    QOIP01000009    RLU19066.1    KQ982769    KYQ50934.1    UFQS01000836    UFQS01001491    UFQT01000836    UFQT01001491    SSX07186.1    SSX11235.1    SSX27529.1    GALA01000757    JAA94095.1    KQ981122    KYN09349.1    GFDL01000635    JAV34410.1    GEZM01055817    JAV72925.1    GDAI01001392    JAI16211.1    CH477658    EAT37677.1    EJY57864.1    GAPW01004808    JAC08790.1    JXUM01033983    KQ561007    KXJ80064.1    GFDF01003954    JAV10130.1    GGFK01007082    MBW40403.1    ADMH02000674    ETN65371.1    CVRI01000056    CRL01791.1    GAMD01002697    JAA98893.1    GGFM01002512    MBW23263.1    AXCN02001803    KQ434874    KZC09660.1    GGFK01007125    MBW40446.1    GL888739    EGI58219.1    KQ414685    KOC63817.1    KZ288204    PBC33215.1    JRES01000335    KNC32191.1    AAAB01008986    EAA00447.4    KQ435840    KOX71389.1    KQ976401    KYM92652.1    JR048983    AEY60823.1    KK852510    KDR22352.1    LJIG01022648    KRT79449.1    GFAC01006997    JAT92191.1    GFDG01002005    JAV16794.1    GBXI01013404    GBXI01012322    GBXI01000210    JAD00888.1    JAD01970.1    JAD14082.1    GBXI01007696    JAD06596.1    GECZ01022029    GECZ01020757    GECZ01011509    GECZ01000549    JAS47740.1    JAS49012.1    JAS58260.1    JAS69220.1    GECU01029347    GECU01013925    GECU01003621    JAS78359.1    JAS93781.1    JAT04086.1    GBBK01003836    JAC20646.1    AXCM01001644    GECU01031079    JAS76627.1    GECU01036524    GECU01013201    JAS71182.1    JAS94505.1    GECZ01022458    GECZ01022125    JAS47311.1    JAS47644.1    GECU01031053    GECU01019451    GECU01009803    JAS76653.1    JAS88255.1    JAS97903.1    GAMC01017773    GAMC01017772    JAB88783.1    CM000160    EDW98789.1    CH954182    EDV53706.1    NNAY01001332    OXU24328.1    GFPF01008138    MAA19284.1    GEDV01007496    JAP81061.1    GFPF01008139    MAA19285.1    GEDV01011223    JAP77334.1    CH902617    EDV41589.1    CM000364    EDX14383.1    CH480848    EDW51185.1    AE014297    AY094863    AAF56431.1    AAM11216.1    CM000070    EAL28441.1    CH479182    EDW34183.1    ACL83566.2    GANO01003234    JAB56637.1    DS235813    EEB17450.1    GBHO01042363    GBHO01042360    GBHO01042358    GBHO01042355    GBHO01036393    GBHO01035593    GBHO01035592    GBHO01035590    GBHO01035589    GBHO01035588    GBHO01035583    GBHO01030522    GBHO01030520    GBHO01030516    GBHO01026043    GBHO01023778    GBHO01023774    GBHO01023772    GBHO01021346    GBHO01011284    GBHO01008523    GBHO01001830    GBHO01001829    GBHO01001827    GBRD01017221    GBRD01017220    GBRD01017219    GBRD01001193    GBRD01001192    GBRD01001191    JAG01241.1    JAG01244.1    JAG01246.1    JAG01249.1    JAG07211.1    JAG08011.1    JAG08012.1    JAG08014.1    JAG08015.1    JAG08016.1    JAG08021.1    JAG13082.1    JAG13084.1    JAG13088.1    JAG17561.1    JAG19826.1    JAG19830.1    JAG19832.1    JAG22258.1    JAG32320.1    JAG35081.1    JAG41774.1    JAG41775.1    JAG41777.1    JAG48606.1    OUUW01000008    SPP84331.1    GEFH01000189    JAP68392.1    AJWK01004548    CH940652    EDW59872.1    GDHF01030824    GDHF01020593    GDHF01015270    GDHF01008528    JAI21490.1    JAI31721.1    JAI37044.1    JAI43786.1    GAKP01017161    GAKP01017152    JAC41800.1    CP012526    ALC45940.1    GBHO01001831    JAG41773.1    CH916373    EDV94755.1    GDHF01030232    GDHF01017090    GDHF01007564    JAI22082.1    JAI35224.1    JAI44750.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000283053    UP000192223    UP000007266    + More
UP000007151    UP000005204    UP000005205    UP000078541    UP000279307    UP000075809    UP000078492    UP000008820    UP000069940    UP000249989    UP000075900    UP000000673    UP000069272    UP000183832    UP000075881    UP000075886    UP000076502    UP000075884    UP000076408    UP000007755    UP000053825    UP000242457    UP000037069    UP000075903    UP000075902    UP000076407    UP000007062    UP000005203    UP000053105    UP000078540    UP000027135    UP000002358    UP000075920    UP000075885    UP000075883    UP000002282    UP000008711    UP000095301    UP000075880    UP000215335    UP000007801    UP000000304    UP000001292    UP000192221    UP000000803    UP000001819    UP000008744    UP000095300    UP000009046    UP000268350    UP000092461    UP000008792    UP000092553    UP000001070   

PRIDE

H9JBF4    Q9VBU6   

Pfam

PF03248   Rer1

Interpro

IPR004932   Rer1        + More
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

A0A1E1WF01   A0A2A4K0S8   A0A194QMB3   I4DJJ4   A0A2H1VH83   S4PWX4   + More
A0A3S2M9B6   A0A1W4X9J9   D6X1A4   A0A212EJL2   H9JBF4   A0A158NUW8   A0A195FPQ6   A0A3L8DFI4   A0A151WSV8   A0A336KQT1   A0A1W4X9B4   T1DF64   A0A151IRM5   A0A1Q3G3N1   A0A1Y1LLW8   A0A0K8TPZ6   Q16T78   A0A023EIL2   A0A182HD55   A0A1L8DUM1   A0A182RMQ7   A0A2M4AHY7   W5JML6   A0A182FVT0   A0A1J1INH3   T1E7W4   A0A2M3Z443   A0A182K8S4   A0A182QPE7   A0A154PEL8   A0A2M4AI32   A0A182N9Q2   A0A182YBQ4   F4X5Q3   A0A0L7QZ26   A0A2A3EN73   A0A0L0CIW1   A0A182VDM2   A0A182THS1   A0A182XFQ5   Q7PV51   A0A088ACJ9   A0A0M8ZX57   A0A195BVP6   V9II70   A0A067RF06   A0A0T6AWC6   A0A1E1WZG3   A0A1L8EDQ9   K7IQB4   A0A0A1WTX4   A0A182W258   A0A0A1X6Q9   A0A1B6H3K5   A0A1B6J3N2   A0A023FFB6   A0A182PK95   A0A182M3J2   A0A1B6HPL7   A0A1B6J5N7   A0A1B6FB04   A0A1B6JGA0   W8AVN9   B4PUA2   B3P6N6   A0A1I8M807   A0A182J6H5   A0A232F1M6   A0A224YZ84   A0A131YT23   A0A224YQT7   A0A131YDD2   B3LWJ5   B4QUR7   B4IJJ4   A0A1W4V8T7   Q9VBU6   Q296L6   B4GEZ8   A0A1I8NPS6   A0A140SRF8   U5EGZ4   E0VVP4   A0A0A9WKS1   A0A3B0KGW0   A0A131XPV6   A0A1B0ESB4   B4M5G1   A0A0K8VDM6   A0A034VJ28   A0A0M4EL41   A0A0A9ZEI7   B4JSL5   A0A0K8W1Q3  

KEGG

101737810    no KO assigned | (RefSeq) protein RER1

GO

GO:0016021   GO:0006621   GO:0006890   GO:0005783   GO:0030173   GO:0003676   GO:0006470   GO:0008138   GO:0003677   GO:0004725   GO:0004887   GO:0043401   GO:0003707   GO:0043565  

PANTHER

PTHR10743  

Length:

194

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

56.48944

Exp number, first 60 AAs:

12.28516

Total prob of N-in:

0.34749

POSSIBLE N-term signal

sequence

inside

1  -  61

TMhelix

62  -  84

outside

85  -  139

TMhelix

140  -  162

inside

163  -  194

 

 

Pi

272.783201

Theta

188.424203

Tajima's D

0.829611

CLR

0.094311

CSRT

0.609319534023299

Interpretation

Uncertain