Gene
KWMTBOMO05681
Pre Gene Modal
BGIBMGA006848
Annotation
TOX_high_mobility_group_box_family_member_3_[Papilio_xuthus]
Transcription factor
Location in the cell
Nuclear Reliability : 4.127
Sequence
CDS
ATGTACAAGAGACCTGAAAATCTCGAAGTGCCCCTGTCCGCTACTCGCGACGCCAAGAACAGTGTGTACGCCATGAATGATCAGACATTTCACACTCCTTCATTTGGTGACGAAGAATTTGATATTCCTTTAATACACGGGCAGCATGCGCCGGGATCAGGAGTCCAGAATACGCATATTCAGTACACACAATTACACCACGCTGCGCCGCAGGTAGGCATGATGAATCCAGCACAGGACGGCTTGGCCCCACCAGGTGGTGCTCCTTCTTATCAACAACCTCTTTATTTACAAGAGCCGCACACGCCTGTCACAACACACAGTGGGGCAGGTGCTCCAGCAGGCAATTATATGATTCAGCAACAACCTGGAGGTCAACAGCGGCTCTTAATAATGCAACCTGCGCAAGCTATAAGTGGGCCACCGACTCCAAGTACACCAACACAGCCATCAGGACCAGTCTATGGCTCCCCACAAAGAGCATCACCACCAGGCACTACAAGTGATGACTCAGATGACAGTGTACCTTCACAGCATTCTCAGTTGCCTGGTGATGCGGAAAGCCTTCTGCCTATCCATTATTGCTCAGCGAGCCGGCAGCAACAAACTACGCTTCATCAGATTGGTGTTGCAAACATGGCTGTCAAAAGAACTTCACCTGATCCAATGGACAATGGAATGAACCGTGGACAGATGCAGAAAAAGCCTAAAGTTCAGAAAAAAAAGAAAAAACGAGACCCAAATGAACCACAAAAGCCAGTATCAGCATATGCCTTATTCTTCAGAGATACCCAAGCAGCAATCAAAGGTCAAAACCCTAATGCTAGTTTTGGGGAAGTTTCAAAGATAGTTGCTTCAATGTGGGATGGTTTAGACTCAGAACATAAAAGTGTTTACAAACAAAAGACAGAAATAGCAAAAAAAGAATACCTTAAGGCTCTTGCTGCCTACAGAGCCAGTCTAGTATCAAAGGGTGGAGAACAAGAAAACCAAGCAATGTACAACCACACTAATAATGGTAATGTGTGTGGAACTAACAGTGGCACCACATACAGTAACTACTACCAAGGACAGACTTATGGAAATAATCATTCGCCTCAGAACTATGTGCAAAATGCTTCCCCTCAAAGATACTCTCCGCAAAATTACTCACCTGGTCAGCCACAACCCTCATATCCCGGGCCAGCTCAACAGTATCCACCTAACTCTCAACAATCTCCTCAAAATTACCAAGCCAATATGACAATTGCTCCCCAAACATACCAGAATGTTCCAGCCCAATCACCACAGGGCTATCAAATAAACTCTTCAACGTCAAATCAGAATTGTCAACCAAATGTTGCTCAATCACCTAGAAACTACCAACCCACACAGTCACCAACAAATTACCCTGCAAGTTCTTCAATGTCACCACCTGGGTACCGACAGGTGCAGGCAACATCACCTCCAATGGGAACAGTACATCCTGCCATGCAATACCATCCTCAACAGCAAATACAAGCAACACATGCTCAGATGCAACAGGCCCAAGTTCATCAACAGCAACAACAGGCCCAACCACCACAAGTGCAGCAGCAAATGCAGCCGATTAAATCTGAGCAAAATGCACCCAATACTAGTGGTAATGGGCATCCACAACAATCTACCGAACAAAATGAAAAGAGAAGTAATTCTTGCATTCGACAGGGCTGCACAAATCCAGCGATATCAAACAGCGAATGGGAGGATGAGTACTGCTCCAATGAATGTGTAGTCAGCCATTGCAGAGATGTCTTTAGTTCCTGGGTGGCATCAAACAACAGTAATCAAATGCAAAACTTCTCAGCAGTTAAATAA
Protein
MYKRPENLEVPLSATRDAKNSVYAMNDQTFHTPSFGDEEFDIPLIHGQHAPGSGVQNTHIQYTQLHHAAPQVGMMNPAQDGLAPPGGAPSYQQPLYLQEPHTPVTTHSGAGAPAGNYMIQQQPGGQQRLLIMQPAQAISGPPTPSTPTQPSGPVYGSPQRASPPGTTSDDSDDSVPSQHSQLPGDAESLLPIHYCSASRQQQTTLHQIGVANMAVKRTSPDPMDNGMNRGQMQKKPKVQKKKKKRDPNEPQKPVSAYALFFRDTQAAIKGQNPNASFGEVSKIVASMWDGLDSEHKSVYKQKTEIAKKEYLKALAAYRASLVSKGGEQENQAMYNHTNNGNVCGTNSGTTYSNYYQGQTYGNNHSPQNYVQNASPQRYSPQNYSPGQPQPSYPGPAQQYPPNSQQSPQNYQANMTIAPQTYQNVPAQSPQGYQINSSTSNQNCQPNVAQSPRNYQPTQSPTNYPASSSMSPPGYRQVQATSPPMGTVHPAMQYHPQQQIQATHAQMQQAQVHQQQQQAQPPQVQQQMQPIKSEQNAPNTSGNGHPQQSTEQNEKRSNSCIRQGCTNPAISNSEWEDEYCSNECVVSHCRDVFSSWVASNNSNQMQNFSAVK
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00505 HMG_box
SUPFAM
SSF47095
SSF47095
Gene 3D
ProteinModelPortal
PDB
2CO9
E-value=3.54746e-19,
Score=235
Ontologies
Topology
Length:
611
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00085
outside
1 - 611
Population Genetic Test Statistics
Pi
290.119225
Theta
209.511849
Tajima's D
1.293177
CLR
0.45891
CSRT
0.737063146842658
Interpretation
Uncertain
