SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05677
Pre Gene Modal
BGIBMGA006843
Annotation
PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
Location
Bomo_Chr10(+):7884718-7902526      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.929
 

Sequence

CDS
ATGGCACTTGTCACAATTCGACGTTCTCCAAGTGTGCAAACACCAAGAAAATCGGATGAAGCAGATAAATCAAGTGACAAGGTCGAAGACAATGCCAACAACCGTGTCAACAAAAGCCTCAATGAATGCTACTTCGCGAATAAGGGCTCAGCAGTGGTGCTGGGGGGTACGGAGCGCGGCTGCATGGATCAGAGACCATCCCCAGTTCGCTCATGTCCCCAGTCTGACATACAAAATCACCTTCAATCTATGTTCTACTTATTGCGCCCTGAAGAGACGCTCAAAATGGCGGTGAAACTGGAAAGCGCTCACCCAGGCCGAACAAGATACCTGGTAGTGGTTTGCCGTAATGAAGAATCTGCGTTATTGGGTATCGACTGTAAGGAGCGCACAACTGTTGGACTAGTCCTAAGAGTCCTGGCCGACACATCCATAAAACTAGACGGAGATGGCGGATTCAGCGTCTGTGTATGTAACCAACAGCATATATTTAAGCCAGTCTCCGTACAAGCCATGTGGTCTGCTTTGCAAACGCTCCATCGGGCTAGTGCCAGAGCGCGACAGTTAAATCATTTTGCAGGGGGACCTTCGCATTCTTGGTGCGTCTTCTATGAGAATCATGTGGACTCTGATCGTTCTTGTCTTAACGAATGGCACGCTATGGATAACATCGAGTCGCGTCGACCGCCATCGCCTGATTCAGTCAGATTAAAGCCACGCGAAAGAGACGAAACAGAATGCGTAATAAGATGTACCCTCAAAGAAATCATGATGAGTGTGGATTTGGACGAAGTGACGAGTAAAGCCATCAGAGGTCGACTGGAGGAGGAGTTGGACATGGACCTCGCCGAGTACAAGTCATTCATTGACCACGAGATGCTCACGATATTAGGTCAGATGGACGCGCCGACAGAAATATTCGACCATGTTTATCTCGGTTCGGAATGGAACGCAAGTAACCTCGAAGAATTACAGAGAAACGGAGTCAGACACATCTTAAACGTTACAAGGGAGATAGACAATTTCTTTCCCGGAATGTTTGAGTATCTGAACATAAGGGTTTACGACGACGACAAGACTGACCTATTGAAACATTGGGACAACACGTTTAAGTATATAAATAAAGCGAGAAATGAAGGTTCAAAAGTACTCGTGCACTGTAAAATGGGCATCAGCAGATCCGCCTCTGTCGTAATAGCTTACGCAATGAAAGCATTCAATTGGAATTTCGACAGAGCCCTGAAGCACGTTAAAGCGAAAAGGAGTTGTATCAAACCGAACACGAATTTTTTGAACCAACTAGAGACTTATCAAGGTATCCTTGATGCAATGAAAAATAAAGAGAAATTACAAAGATCAAAGTCTGAAACGAATTTAAAATTGCCTAAATCGGTTACGAAAAATGAGAACAAATCAATGGAGCCGACGCCTCTAGTCTTAGCTTTGACGGGATCGTACAGCGGCCGGCCGCGCTCGTGGTCGCCGGACACCAAGATAGCGTCTCAGCTCCTCCCTGCCCTCCCGCCGACGTCGGTTTCCCTCGAGAATTTAGCCTCCGAGACCAGGCACATGCTAATGCCGTGTGCCAACGGAAGCTACAGCGTATCACCGAATCAAATAATCAGATTAAAAGGCGAAGGCGCTCCATCAGTGAAACACATTGTGAATGAAATCGAGAACGCTACGTCGGGCGATCGCAGGGATCTGAGTCGTAGATATCAAAAATTGATTTTTGGTAGTCAGTATGATTGTCTCAGCGATCGCTCTGTCGATGTTCCTAGCGCTCCGAGCGTTCCAACGCAAACTTCTCCGACGCGCAGTTCCAGTCTCAAATATGCGCAGCATTATTTCGAAGGAGATAGAATACACACGTGGGACCCCGGGGAAACGTCTGCGTGTCGAGACGAGATCGGTCGCAATCTTAGTAATAGTGATAATTTAGTAAAAAGTGACAGTGGCATCGTAGATATAAAAACGAATAAAGTGACAATTAGTGACGGTTACAGTTTTATCAATTTGACAGAACGGAATTTAGAAAGTGAAGGTAAACGAGTTCCCGACGAAGAAGCAGCACCTCCGAGTCGACAAAGTTCGTGGAGTTCATTCGATAGCGCAGTTGTACTCGATCTGTCTCGGCACTCTTCGTGGGGCTCGTACGATACGAGAGGCGCAAAAACGCAGATCATCGGTCGGGAGGAATCTATTAAACGAGCCAAAGATCGATCTGACGATCGCAACTTTAAGAAGGATGATACAGAACGCGGTGCCGAATGCGCGGCCGCCTCACAAAAACAGCTCTCCGATCTCAGCATCATAAGAGAACACAACGAGGCACGCAACGCCGAGCGGCGACTCACCGACAGATCCGGCCTCGTGGCGGACAATGAAAGAAAATTTAACGAGACCTGTGCCATATTAAAAGAACTCGCCAACGCCGCAGCCAGAATGGAAAAAGCGAGAGACCGAGGGGCGTCCACGTGGAGCGGGCGCCTGGCCGCCTCCGTGCCCGTCGACACGTGGCTGCGAGCCGGCCTACGGCGCCGCCGGCCTGTCTGTGCTTCGCAAGGCGACTTGCCGCGCGCCGCAGCCGGACTCGTCAGTAACCTCAAAAAGGAGTTCGAAGCTCGCTCCGAAACCGATACATTGCGACGGTCGGAACCTCGCACTCGGACGGCAGCCAACGAGCACGCCGATAGATCTCCGGCGTCGCCACCTTCCGGCGAAGATCTCTCCGTGAAAGTCTTAGTAGACAGATACGACAGGCCCGGGCGTTCGAGGTCGGAGTCGGTCGGAACGAAAGGTCCACAAGAGTCCGTCTCGAAGAAATGTCGGTTGACGGCGGAGAGCGAGAGTCGCACTCGCACTCGCAGCGGCGCGGTGGCGCTGCGGAACTCGTTCTGCGGCGCCTTCCGCGGGCTCGGCGCCGACCGGCCGCCGCCCGCCCCCACCGTCCTCGCGTTGGCTCCTATCGACTATAACGATGTGGTGGTATCTACTGTGATGTCAAAAGCTCAAAACAAAAAACAATTGCAACACGGGAAGACGCATCCGTTAACGAGGCTCAACCTAAATCGGTCAAACAATAGATGTTCAAATCCTGTATATAACACTATGTAG
Protein
MALVTIRRSPSVQTPRKSDEADKSSDKVEDNANNRVNKSLNECYFANKGSAVVLGGTERGCMDQRPSPVRSCPQSDIQNHLQSMFYLLRPEETLKMAVKLESAHPGRTRYLVVVCRNEESALLGIDCKERTTVGLVLRVLADTSIKLDGDGGFSVCVCNQQHIFKPVSVQAMWSALQTLHRASARARQLNHFAGGPSHSWCVFYENHVDSDRSCLNEWHAMDNIESRRPPSPDSVRLKPRERDETECVIRCTLKEIMMSVDLDEVTSKAIRGRLEEELDMDLAEYKSFIDHEMLTILGQMDAPTEIFDHVYLGSEWNASNLEELQRNGVRHILNVTREIDNFFPGMFEYLNIRVYDDDKTDLLKHWDNTFKYINKARNEGSKVLVHCKMGISRSASVVIAYAMKAFNWNFDRALKHVKAKRSCIKPNTNFLNQLETYQGILDAMKNKEKLQRSKSETNLKLPKSVTKNENKSMEPTPLVLALTGSYSGRPRSWSPDTKIASQLLPALPPTSVSLENLASETRHMLMPCANGSYSVSPNQIIRLKGEGAPSVKHIVNEIENATSGDRRDLSRRYQKLIFGSQYDCLSDRSVDVPSAPSVPTQTSPTRSSSLKYAQHYFEGDRIHTWDPGETSACRDEIGRNLSNSDNLVKSDSGIVDIKTNKVTISDGYSFINLTERNLESEGKRVPDEEAAPPSRQSSWSSFDSAVVLDLSRHSSWGSYDTRGAKTQIIGREESIKRAKDRSDDRNFKKDDTERGAECAAASQKQLSDLSIIREHNEARNAERRLTDRSGLVADNERKFNETCAILKELANAAARMEKARDRGASTWSGRLAASVPVDTWLRAGLRRRRPVCASQGDLPRAAAGLVSNLKKEFEARSETDTLRRSEPRTRTAANEHADRSPASPPSGEDLSVKVLVDRYDRPGRSRSESVGTKGPQESVSKKCRLTAESESRTRTRSGAVALRNSFCGAFRGLGADRPPPAPTVLALAPIDYNDVVVSTVMSKAQNKKQLQHGKTHPLTRLNLNRSNNRCSNPVYNTM

Summary

Uniprot
A0A2H1W0P9   A0A194PE13   A0A212EIG0   A0A2A4J9B5   A0A154NZJ5   A0A1B6C0Y3   + More
A0A139WBQ7   A0A195CNF1   A0A1B6GY69   A0A1B6CFN5   A0A1B6G0V3   A0A151J983   E0VG89   A0A2H8TJ93   A0A1L8E2Y9   A0A1L8E2Y0  
Pubmed
26354079    22118469    18362917    19820115    20566863   
EMBL
ODYU01005623    SOQ46658.1    KQ459606    KPI91502.1    AGBW02014631    OWR41293.1    + More
NWSH01002534    PCG68050.1    KQ434785    KZC05023.1    GEDC01030369    JAS06929.1    KQ971372    KYB25369.1    KQ977513    KYN02195.1    GECZ01002412    JAS67357.1    GEDC01025115    JAS12183.1    GECZ01013826    JAS55943.1    KQ979480    KYN21251.1    DS235132    EEB12395.1    GFXV01002304    MBW14109.1    GFDF01000997    JAV13087.1    GFDF01000996    JAV13088.1   
Proteomes
UP000053268    UP000007151    UP000218220    UP000076502    UP000007266    UP000078542    + More
UP000078492    UP000009046   
Pfam
PF08766   DEK_C        + More
PF00782   DSPc
Interpro
IPR020422   TYR_PHOSPHATASE_DUAL_dom        + More
IPR014876   DEK_C       
IPR000340   Dual-sp_phosphatase_cat-dom       
IPR000387   TYR_PHOSPHATASE_dom       
IPR016130   Tyr_Pase_AS       
IPR029021   Prot-tyrosine_phosphatase-like       
SUPFAM
SSF52799   SSF52799       
Gene 3D
3.90.190.10    
CDD
cd00127  DSPc
ProteinModelPortal
A0A2H1W0P9   A0A194PE13   A0A212EIG0   A0A2A4J9B5   A0A154NZJ5   A0A1B6C0Y3   + More
A0A139WBQ7   A0A195CNF1   A0A1B6GY69   A0A1B6CFN5   A0A1B6G0V3   A0A151J983   E0VG89   A0A2H8TJ93   A0A1L8E2Y9   A0A1L8E2Y0  
PDB
2NT2     E-value=1.28152e-56,     Score=560

Ontologies

KEGG
101737293    K05766 protein phosphatase slingshot [EC:3.1.3.16 3.1.3.48] | (RefSeq) protein phosphatase Slingshot
GO
GO:0008138   GO:0004725   GO:0004721   GO:0000902   GO:0003779   GO:0016311   GO:0016791   GO:0006470   GO:0003677   GO:0004887   GO:0043401   GO:0003707   GO:0043565  

Topology

Length:
1038
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01205
Exp number, first 60 AAs:
0.00036
Total prob of N-in:
0.00012
outside
1  -  1038
 
 

Population Genetic Test Statistics

Pi
223.617159
Theta
194.933873
Tajima's D
0.423971
CLR
0.370892
CSRT
0.496775161241938
Interpretation
Uncertain
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