SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05675  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006835
Annotation
ribosomal_protein_L23A_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.984
 

Sequence

CDS
ATGCCACCGAAGAAGCAACCCGAGAAATCCGGGTCCTCCGGGTCCAAACCCGCGGAAAAGAAACCGGCAACAGCCAAAACACCGGCTGCAGCTCCTAAGGCTGCGGCAGCTCCTGCAGCTTCTGCAAGCTCTACTAAACCTGCGTCAGCCAAAACACCGGCACCTGCCCCGAAAGCAGCTGCGCCTGCCCCGAAACCAGCTGCGCCTGCCCCGAAACCAGCTGCGCCTGCCCCGAAAGCAGCCTCTGCCCCGAAAGCAGCTGCCTCTGCCCCCAAACCTGCAGCCCCTGCTCCCAAACCTGCAGCTGCAAAACCCGCAGCCGCTAAACCAGCAGCCGCAAAACCTGCAGCCGCAAAGCCTGCAGCCGCCAAACCTGCTGCCGCAAAGCCTGCTGCTGCTGCTGCTGCTGCACCCACATCTAAACCTGCTGAAAAGAAAACTGCATCAGCTCCCACTGCAAAACCTGGCTCTGCTAAAGCAGCAGCATTGAAGGCTAAGTCTAGTGCTAAACCTTCAGCTAAGAAGGCTGCGGCAACAGCAGCCAAAACTGCCAAACCCAAGCCAGCAGTTTCCAAATTGAAGATTGCACCGAAGCCCAAAAAGACTGGGATTAAGGGACAAAAAAAAGTAGTGAAACCTGTTACTAAAGCACTTAAGGCTCAGAGGAAGGTTGTAAAAGGTGAACATGGGAAGAGAGTACGGAAAATTCGCAACTCTGTGCATTTCCGCAGACCCAAGACGTTTGAACCTCCTAGGCACCCTAAATACCCAAGGAAGTCTCTGCCTAAGAGAAATCGCATGGATGCCTACAACATCATTAAATTCCCTCTCACGTCTGAAGCAGCAATGAAGAAGATTGAAGATAACAACACCTTGGTCTTTATTGTTCACACAAGTGCAAACAAGCACCATATCAAGGCTGCAGTCAAGAAACTCTATGATATAAATGTTGCTAAAGTCAACACACTCATCAGGCCTGATGGTAAGAAGAAAGCGTACGTACGACTCGCTAGAGATTATGACGCATTGGACGTTGCCAACAAAATTGGCATCATATAA
Protein
MPPKKQPEKSGSSGSKPAEKKPATAKTPAAAPKAAAAPAASASSTKPASAKTPAPAPKAAAPAPKPAAPAPKPAAPAPKAASAPKAAASAPKPAAPAPKPAAAKPAAAKPAAAKPAAAKPAAAKPAAAKPAAAAAAAPTSKPAEKKTASAPTAKPGSAKAAALKAKSSAKPSAKKAAATAAKTAKPKPAVSKLKIAPKPKKTGIKGQKKVVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII

Summary

Uniprot
ProteinModelPortal
PDB
4V6W     E-value=3.8465e-43,     Score=439

Ontologies

Topology

Length:
352
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01560
outside
1  -  352
 
 

Population Genetic Test Statistics

Pi
193.483556
Theta
155.238595
Tajima's D
0.510947
CLR
0.189769
CSRT
0.51722413879306
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 FPLTSEAAMK 100.00 5e-05
28556443 FPLTSEAAMK 100.00 5e-05
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