SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05673  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006841
Annotation
PREDICTED:_A-kinase_anchor_protein_1?_mitochondrial_isoform_X2_[Amyelois_transitella]
Location
Bomo_Chr10(+):7817968-7824621      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.466
 

Sequence

CDS
ATGGCACCTTGTCGTCAACTACTCATGTGGTCAGTACCATCCATAGCAGTCTTATTGGGTATTTTTTGGTTCAAGAAAAAAAGGGAATATGCAAAGTCTGACCCAGGTGGAAGAGAACGGCTAAAGAGTTTGAAAGAGGAACTTGCTGAGGTTTTGAACGCACAAGCTGAGGCAAATCGAGGCTCGCCTATAAGCAAATTAGAGCACTCTATCATTAAATCATCTCCTATTGATATCATACCTAACGGCACAAATTCACAGCGATCATCCCCTTTGGAACTCACTGACGAAGAAATTGATCTGGAGATAGAAAAAATAATCAGAATAAAATCCATTGGAAAAGAGAAGAGAATGTCAGCTGGCTTTGACAAACAAAATTTGATTGTGAGCTCATGTACTACAGAACCCTCCTTCGTAGTTAAGGAGTTGCAGAATAATTTGTGTTCACATGTTCAGCTCCAACAATCTTCACCTAAAAACTCAGAAATGCACATAATAGACAGTAATCATAGCTTTAGTAGTAATGTAAATTCTAATAAGGATCTGCTTGATTCAGAAGCAGAATGTTATAAAAAAAATAGTACAAACAATGGGACTGAGACCTTTGTGTCTGAAGGTGATACAATAGAAAATACCTCTGAAGGTACAGAAGGATTACAACCACTTGATGTTGTTGATGAACCCTGCAATACAGGTGACAACAATGATAGGTTTTCCACTTCACAAAGAAGACTCCTTTCGGAGAGGGACTCTGCTAATCATAGTCCTGTTGATCCTTTATTAGCTAGTCCCTCAATGTGCAATTTTTCAGATAATCACAGTGAGGGTTCAAGTGACAGTGGTAAAGGCTGTTCTGAGGCTGCTAGCCCTCCTCCTGCCAGTTTAAATATAGTTCCAACAGAAACAGACCTTAGGATACACCAATTTGTTTTATCTCAAAATCTTGTAGGTCTTTTAATAGGAAAACATGGTTCATTTGTGACTCAAATTAAAGCCAAAACTGGTGCAAGTGTTTACGTCAGAAGGCATCCTGAATCTTCCAAACAGAAAATATGTGCAGTTGAAGGAACACAAAGTGAAATAGAAGCAGCTTTAGATATGATAAAAGAAAAATTTCCTGAAAAAAAATTCCCAAACTTCTCACTGCAAGAAATCAGTGCTGAACTCTACCAAAAACTCACACCTCTCATCCCTGAGTTTTTACAATTGGTCGAATCTGTGAATAACGACACGATATTGACGTGTCTGGTGAGTGCGGGGCACTTCTTCCTCCAGCAGCCCCTGCACCCCACGTTTCCGTCGCTGCACGTGCTTCACCGGCTAATGGCCGCCACGTACCAGAACCCGGATGTGCCGTCGTTGCCACGCCCCGTGAAAGAGGGAGCTATCTGTGCTGCGCCTACTGAAAATAATTGGTATCGCGCCCAAGTGATATCTACCTCTGAAGAGAATGATACATCTGTCGTGAAACTAGTGGACTTCGGTGGATATCTCACTGTTGACAACGATCAGCTCAAACAGATCCGCTCCGATTTTATGACACTGCCTTTCCAGGCGACGGAGGCTCTCTTAGCATTTGTGAAACCAGCTAACAATGTAGAGTGGAGCGGAGAGGCTTTACGTATAATGGCCGGTTTGACCGCGGGGCAGCTCCTACACGCGCAGGTCGCAGGCTACGACGAGACTGGCCTGCCTCTTGTACATCTATACCTCACATTACATCCTCAACAAGTCATATTCCTGAATAGAGAGCTAGTAGAACGCGGACTGGCGGAGTGGGATGTTCCACCAGACTCCTGA
Protein
MAPCRQLLMWSVPSIAVLLGIFWFKKKREYAKSDPGGRERLKSLKEELAEVLNAQAEANRGSPISKLEHSIIKSSPIDIIPNGTNSQRSSPLELTDEEIDLEIEKIIRIKSIGKEKRMSAGFDKQNLIVSSCTTEPSFVVKELQNNLCSHVQLQQSSPKNSEMHIIDSNHSFSSNVNSNKDLLDSEAECYKKNSTNNGTETFVSEGDTIENTSEGTEGLQPLDVVDEPCNTGDNNDRFSTSQRRLLSERDSANHSPVDPLLASPSMCNFSDNHSEGSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVEGTQSEIEAALDMIKEKFPEKKFPNFSLQEISAELYQKLTPLIPEFLQLVESVNNDTILTCLVSAGHFFLQQPLHPTFPSLHVLHRLMAATYQNPDVPSLPRPVKEGAICAAPTENNWYRAQVISTSEENDTSVVKLVDFGGYLTVDNDQLKQIRSDFMTLPFQATEALLAFVKPANNVEWSGEALRIMAGLTAGQLLHAQVAGYDETGLPLVHLYLTLHPQQVIFLNRELVERGLAEWDVPPDS

Summary

Uniprot
H9JBE6   A0A2A4IXG9   A0A2H1WNS6   A0A1E1WTX1   A0A1E1W4C5   A0A194PFN3   + More
A0A194QMC9   S4PG15   A0A212EIJ5   A0A0L7LVM2   A0A1E1WGE8  
Pubmed
19121390    26354079    23622113    22118469    26227816   
EMBL
BABH01030817    NWSH01005003    PCG64505.1    ODYU01009959    SOQ54721.1    GDQN01001159    + More
GDQN01000571    JAT89895.1    JAT90483.1    GDQN01009487    GDQN01009221    JAT81567.1    JAT81833.1    KQ459606    KPI91509.1    KQ461198    KPJ06110.1    GAIX01003817    JAA88743.1    AGBW02014631    OWR41298.1    JTDY01000002    KOB79527.1    GDQN01004999    GDQN01002689    JAT86055.1    JAT88365.1   
Proteomes
UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
PRIDE
H9JBE6   
Pfam
PF00013   KH_1        + More
PF00567   TUDOR
Interpro
IPR002999   Tudor        + More
IPR004087   KH_dom       
IPR004088   KH_dom_type_1       
IPR035437   SNase_OB-fold_sf       
IPR036612   KH_dom_type_1_sf       
IPR033104   Akap1       
SUPFAM
SSF54791   SSF54791       
Gene 3D
2.40.50.90     3.30.1370.10    
ProteinModelPortal
H9JBE6   A0A2A4IXG9   A0A2H1WNS6   A0A1E1WTX1   A0A1E1W4C5   A0A194PFN3   + More
A0A194QMC9   S4PG15   A0A212EIJ5   A0A0L7LVM2   A0A1E1WGE8  
PDB
5J39     E-value=1.67901e-11,     Score=169

Ontologies

KEGG
101736520    K16518 A-kinase anchor protein 1, mitochondrial | (RefSeq) A-kinase anchor protein 1, mitochondrial
GO
GO:0003723   GO:0005739   GO:0034237   GO:0010738   GO:0016021   GO:0016301   GO:0003676   GO:0008270   GO:0043565   GO:0003677   GO:0004887   GO:0043401   GO:0003707  
PANTHER
PTHR22948:SF48  

Topology

Length:
599
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
17.154
Exp number, first 60 AAs:
17.1482
Total prob of N-in:
0.95177
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  24
outside
25  -  599
 
 

Population Genetic Test Statistics

Pi
158.009861
Theta
15.267451
Tajima's D
-0.223273
CLR
14.464953
CSRT
0.306884655767212
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 RDLVQEDDDLSPPPPLDAVPKK 100.00 1e-10
26822097 IEAMCFDGIKR 100.00 0.004
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