Silkworm Genome Informatics Database

Gene

KWMTBOMO05668

Pre Gene Modal

BGIBMGA006798

Annotation

Palmitoyltransferase_[Operophtera_brumata]

Location

Bomo_Chr10(+):7565683-7567016 View in EpiBrowser

Full name

Palmitoyltransferase

Location in the cell

PlasmaMembrane Reliability : 4.129

CDS

ATGATATCCCTGATTGTGTACACAGTGCTGTACGTGTCACATACTATCGCTCACGTTACTGCATCCATGCTAGATCCAAGTGAGACCGAATTGAGAAAGATGGAAATAAATATTATTCCGGAATTCGATCGAACTATTCACGCGCATGTCATTGAGAATGGAAGATGTCATTTATGCAACATACAAGCAACAAGTAGATATACTAAACACTGTAGTATTTGCAATAAATGTGTGGATCAATTTGATCATCACTGCAAGTGGTTGAACAACTGCATTGGAAACAGGAACTACTTGCCGTTCATTGCATCTGTTATTACAGCTTTGATGATATCTGCGTTTACGGCTGCATTGTGTCTTACAGACATTGTTTTGTTTTTAACTAATCCGTATAAATTAAGTACTGGCCATTATAATTATATCAATTGTACTATAAGCAAAGAGACGTACTCTGAATTTTGTAAAATATCTATGCCATTGTTAGCATTTTTAGTGTTATTCTTTATAATAGCTATTGGGATATCATGTGCCTTGTTACATTTATGCTGTTTTCACGTTTACATCTCATATTTGGGAGTTTCCACTTATGAATATGTTATGAAAAGTGGCACATCAGAAGCAATACGCTGTCAATGCTTTATTTGTAAGTGTCGCAGAATAAGTTTACCGAAAATGTATATTAAAGACAACACGAAACCCGATGATGAAGTTGTTGATAAACACGACAAACCAGAATTAATAGACGGATTATACGACAGCGAAACTCGAAATGGCAGCAATCTAATTGTTTTGGTAAATAACCAATTGGATAGAGCAAGAAATTGGTTTGTATTCGATAGGAATAAAGTACATCCGCACAATGTTGATAGTGACAGATAA

Protein

MISLIVYTVLYVSHTIAHVTASMLDPSETELRKMEINIIPEFDRTIHAHVIENGRCHLCNIQATSRYTKHCSICNKCVDQFDHHCKWLNNCIGNRNYLPFIASVITALMISAFTAALCLTDIVLFLTNPYKLSTGHYNYINCTISKETYSEFCKISMPLLAFLVLFFIIAIGISCALLHLCCFHVYISYLGVSTYEYVMKSGTSEAIRCQCFICKCRRISLPKMYIKDNTKPDDEVVDKHDKPELIDGLYDSETRNGSNLIVLVNNQLDRARNWFVFDRNKVHPHNVDSDR

Catalytic Activity

hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein]

Similarity

Belongs to the DHHC palmitoyltransferase family.

Uniprot

H9JBA3 A0A0L7KQ43 A0A1E1WVZ7 A0A212ERT8 A0A194QKN4 A0A1B0CB41 + More
A0A0C9RFC6 A0A1B6GJ17 A0A1B6MN25 X1XGN7 A0A2H8TUR6 A0A2S2NH20 A0A0L7QS53 A0A2S2R999 A0A3Q0IK63

EC Number

2.3.1.225

Pubmed

19121390 26227816 22118469 26354079

EMBL

BABH01042040 JTDY01007413 JTDY01000002 KOB65215.1 KOB79526.1 GDQN01000078 + More
JAT90976.1 AGBW02012957 OWR44161.1 KQ461198 KPJ06118.1 AJWK01004792 GBYB01015264 JAG85031.1 GECZ01007354 JAS62415.1 GEBQ01002631 GEBQ01000157 JAT37346.1 JAT39820.1 ABLF02040691 GFXV01005507 MBW17312.1 GGMR01003593 MBY16212.1 KQ414758 KOC61462.1 GGMS01017413 MBY86616.1

Proteomes

UP000005204 UP000037510 UP000007151 UP000053240 UP000092461 UP000007819 + More
UP000053825 UP000079169

PRIDE

H9JBA3

Pfam

PF01529 DHHC + More
PF01207 Dus

Interpro

IPR001594   Palmitoyltrfase_DHHC        + More
IPR013785   Aldolase_TIM
IPR018517   tRNA_hU_synthase_CS
IPR035587   DUS-like_FMN-bd
IPR001269   tRNA_hU_synthase

Gene 3D

3.20.20.70

CDD

cd02801 DUS_like_FMN

ProteinModelPortal

H9JBA3 A0A0L7KQ43 A0A1E1WVZ7 A0A212ERT8 A0A194QKN4 A0A1B0CB41 + More
A0A0C9RFC6 A0A1B6GJ17 A0A1B6MN25 X1XGN7 A0A2H8TUR6 A0A2S2NH20 A0A0L7QS53 A0A2S2R999 A0A3Q0IK63

PDB

6BML E-value=2.98453e-07, Score=129

KEGG

101735943 K20027 palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225] | (RefSeq) probable palmitoyltransferase ZDHHC1

GO

GO:0019706 GO:0016021 GO:0050660 GO:0017150 GO:0008270 GO:0003824 GO:0005739 GO:0007005 GO:0031307 GO:0003700 GO:0043565

SignalP

Position: 1 - 21, Likelihood: 0.777692

Length:

291

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

56.40713

Exp number, first 60 AAs:

7.32300999999999

Total prob of N-in:

0.70475

inside

1 - 103

TMhelix

104 - 126

outside

127 - 158

TMhelix

159 - 181

inside

182 - 291

Pi

238.939252

Theta

180.923295

Tajima's D

0.903728

CLR

76.223564

CSRT

0.633068346582671

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics