Gene

KWMTBOMO05667

Pre Gene Modal

BGIBMGA006797

Annotation

PREDICTED:_tRNA-dihydrouridine(16/17)_synthase_[NAD(P)(+)]-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr10(+):7558423-7563778      View in EpiBrowser

Full name

Palmitoyltransferase      

Location in the cell

Nuclear   Reliability : 3.004

CDS

ATGGCTAACTGGATTTTTGAGTTAAATAATCCACAATTTGTTGTGGCGCCTATGGTTGATGCTAGCGAACTAGCTTGGCGCCTACTCTGTAGACGGCATGGTGCAAATTTGTGCTACACTCCTATGTTACATAGTAATGTTTTTACAAAAGATGCTAAATACAGGAAAGACAACCTAGTTACTTGTGAAGAAGATCGTCCTTTAATAGTACAGTTTTGCGGTAACAACCCTGAAATTATGGCATCAGCTGCAAAATTAGCTGAAGAATATTGTGATGCTATAGACATCAACCTTGGATGTCCTCAATCTATTGCTAAAAGAGGAAGATATGGATCCTTTCTTCAAGATGACTGGGAATTATTGAAAGAGATCGTGACTGCAATGTCCAAGGCTGTTTCCATACCAATCACATGTAAAGTGAGAATATTTGAAGATATTGACAAATCAGTAAATTATGCCAAGATGCTAGAAGCATCTGGATGTAAACTCCTAACAGTTCATGGAAGAACAAGAGAGCAGAAAGGGCCTTTGACTGGCATTGCTAGTTGGAAACATATAAAAGCTATAAGGGAGTCTGTATCAATACCTATGCTTGCAAATGGTAATATTCAGTGTCTCGAAGATGTATACAGGTGTATAGAATATACCAAAGTTGATGGCGTAATGAGTGCAGAGGGAATTCTTACAAATCCTGCTCTGTTTGAAGGTATTAACCCAGTCACTTGGGAATTGGCAGAAGAGTATTTAGAATTAGTTTACAGGTATCCCTGCCCCTCATCTTATGTTAGAGGACATCTATTCAAAATTTTCCATAAAATTTTCACCTTTGATGAGAACAATGATGACCGACAATTACTTGCTACAGCTCAGAACATAAATGACTTCAAGAAAGTTTGTGAAAATCTAAAAAATAAATATCAACCTTATCAAGAAGGGAAAATACATTATGAAGATGAAGAAAATATATCCAGGACAGGGTACAATTTAATTTTACCACCATGGATATGTCAACCTTATGTGAGAATGTCACCAGAAGCACATACACAGAAAATGCACGAGCTAAGTAAAAATCAGAACAATCAGGAATGTAAAAGAATTAATGAAGACCAAGATGGAAATCATATATCACGTAAGAAAATGAAAAAGATGAAACGGATGATGCGAAGACCTCAGAAAGCAGATCAAAACCAGAATGGGCGAAATGGAGATATTTGTTTCAATGATAAATGTCCTAATCCTCTGGGCGGTAAATGTACATACAAATTATGTAAAAAATGTTGTAAAAATAAGTGTTACGAAGAAGACTTGGATTGTAGAGGTCACAGGATACTTGTTCATACTAGAAGAGAAATTGCCAAATTATTTGCAAATAAAAATACTGAGGAGACGTAG

Protein

MANWIFELNNPQFVVAPMVDASELAWRLLCRRHGANLCYTPMLHSNVFTKDAKYRKDNLVTCEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVHGRTREQKGPLTGIASWKHIKAIRESVSIPMLANGNIQCLEDVYRCIEYTKVDGVMSAEGILTNPALFEGINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQPYVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNHISRKKMKKMKRMMRRPQKADQNQNGRNGDICFNDKCPNPLGGKCTYKLCKKCCKNKCYEEDLDCRGHRILVHTRREIAKLFANKNTEET

Catalytic Activity

hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein]

Similarity

Belongs to the DHHC palmitoyltransferase family.

Uniprot

H9JBA2   A0A2H1VAJ1   A0A2A4JMB6   A0A3S2LSS1   S4NTX3   A0A212ERP2   + More
A0A194QL60   A0A194PKA3   A0A2A4JNY5   A0A0L7KQ81   D6WDX9   A0A026WXE5   B4N791   A0A0A9Y6K3   A0A2A3E4L6   B3MV29   E2AAB5   B4P2B2   I4DL23   B0W8T2   A0A1W4UQE9   A0A0P8ZHW2   A0A0R1DN25   A0A158NQG5   A0A1Q3F214   A0A1Q3F1I1   B3N7M4   A0A067RDJ2   B3MV32   B4JBF6   A0A1Y1M200   E0V9M0   A0A3B0JI06   A0A2J7QRU7   A0A0A1XKZ4   A0A0L0CNF3   A0A151HYM1   A0A1I8QC70   A0A0N0BJ07   B4ICU0   A0A0L7QS53   Q9VPM1   B4Q610   A0A034VG28   A0A195CAX6   Q17IV4   B4LU58   A0A3B0KE89   A0A1B6H1N2   A0A1B6DB79   W8BVL0   A0A0M4EEH4   B4KHG1   T1HT59   A0A088A3N5   A0A154NYT5   A0A1B6I9I4   A0A151WRL4   A0A1B6H0S0   B4GJP2   B5DHQ5   A0A1B6GZY2   A0A023F305   A0A195DUZ6   E9JB07   Q7Q4M3   A0A1W4WRQ0   A0A195EXM9   A0A1A9XYK2   A0A1B0BJJ5   A0A0K8VH45   A0A182HAK4   A0A182NUU9   A0A1L8DRK2   A0A1I8M936   A0A2M4CGT1   W5J422   A0A2M4CGT8   A0A182WHH0   A0A1A9UDD5   A0A182Y5J0   A0A1A9VLN0   A0A034VL44   A0A182RRK5   A0A182P3A4   N6TF58   U4U9J7   A0A182IBX4   A0A182L077   A0A1J1I0F0   A0A182LUH3   A0A182X151   A0A182VE55   A0A087UX04   A0A1A9ZZF3   A0A1B0FMX1   A0A1A9WW05   T1KAI3   A0A2P8ZNA2   A0A0N7ZBR3  

EC Number

2.3.1.225

Pubmed

19121390    23622113    22118469    26354079    26227816    18362917    + More
19820115    24508170    17994087    25401762    20798317    17550304    22651552    21347285    18057021    24845553    28004739    20566863    25830018    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25348373    17510324    24495485    15632085    23185243    25474469    21282665    12364791    26483478    25315136    20920257    23761445    25244985    23537049    20966253    29403074   

EMBL

BABH01042040    ODYU01001529    SOQ37870.1    NWSH01001013    PCG73131.1    RSAL01000016    + More
RVE53065.1    GAIX01012051    JAA80509.1    AGBW02012957    OWR44162.1    KQ461198    KPJ06119.1    KQ459606    KPI91525.1    PCG73130.1    JTDY01007413    KOB65216.1    KQ971324    EFA01195.1    KK107078    EZA60503.1    CH964182    EDW80232.1    GBHO01018475    GBHO01018474    GBRD01005718    JAG25129.1    JAG25130.1    JAG60103.1    KZ288403    PBC26206.1    CH902624    EDV33094.1    GL438061    EFN69626.1    CM000157    EDW87108.1    KRJ97027.1    AK401991    BAM18613.1    DS231860    EDS39311.1    KPU74294.1    KRJ97026.1    ADTU01023314    GFDL01013449    JAV21596.1    GFDL01013633    JAV21412.1    CH954177    EDV57200.1    KQS69917.1    KK852529    KDR21946.1    EDV33097.1    CH916368    EDW03979.1    GEZM01042426    JAV79864.1    AAZO01000194    DS234994    EEB10076.1    OUUW01000006    SPP81977.1    NEVH01011885    PNF31297.1    GBXI01002631    JAD11661.1    JRES01000254    KNC32954.1    KQ976723    KYM76686.1    KQ435724    KOX78504.1    CH480829    EDW45366.1    KQ414758    KOC61462.1    AE014134    AY051946    BT124833    AAF51525.2    AAK93370.1    AAN10512.1    ADF87928.1    CM000361    CM002910    EDX03194.1    KMY87272.1    GAKP01016716    JAC42236.1    KQ978023    KYM98014.1    CH477236    EAT46639.1    CH940649    EDW64045.1    SPP81978.1    GECZ01001188    JAS68581.1    GEDC01014349    JAS22949.1    GAMC01003318    JAC03238.1    CP012523    ALC38542.1    CH933807    EDW11225.1    KRG02584.1    ACPB03006071    KQ434783    KZC04732.1    GECU01024134    JAS83572.1    KQ982803    KYQ50549.1    GECZ01001495    JAS68274.1    CH479184    EDW36858.1    CH379058    EDY69832.1    KRT03619.1    GECZ01001802    JAS67967.1    GBBI01002977    JAC15735.1    KQ980322    KYN16572.1    GL770707    EFZ09996.1    AAAB01008964    EAA12777.4    KQ981948    KYN32652.1    JXJN01015425    JXJN01015426    GDHF01014449    JAI37865.1    JXUM01122850    KQ566650    KXJ69942.1    GFDF01005077    JAV09007.1    GGFL01000345    MBW64523.1    ADMH02002168    ETN58083.1    GGFL01000346    MBW64524.1    GAKP01016714    JAC42238.1    APGK01030352    KB740770    ENN78999.1    KB632132    ERL89003.1    APCN01000754    CVRI01000025    CRK92302.1    AXCM01010375    AXCM01010376    KK122085    KFM81893.1    CCAG010004915    CAEY01001939    PYGN01000012    PSN57963.1    GDRN01079617    JAI62368.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000007266    UP000053097    UP000007798    UP000242457    UP000007801    UP000000311    UP000002282    UP000002320    UP000192221    UP000005205    UP000008711    UP000027135    UP000001070    UP000009046    UP000268350    UP000235965    UP000037069    UP000078540    UP000095300    UP000053105    UP000001292    UP000053825    UP000000803    UP000000304    UP000078542    UP000008820    UP000008792    UP000092553    UP000009192    UP000015103    UP000005203    UP000076502    UP000075809    UP000008744    UP000001819    UP000078492    UP000007062    UP000192223    UP000078541    UP000092443    UP000092460    UP000069940    UP000249989    UP000075884    UP000095301    UP000000673    UP000075920    UP000078200    UP000076408    UP000075900    UP000075885    UP000019118    UP000030742    UP000075840    UP000075882    UP000183832    UP000075883    UP000076407    UP000075903    UP000054359    UP000092445    UP000092444    UP000091820    UP000015104    UP000245037   

PRIDE

H9JBA2    Q9VPM1   

Pfam

PF01207   Dus        + More
PF01529   DHHC

Interpro

IPR035587   DUS-like_FMN-bd        + More
IPR001269   tRNA_hU_synthase       
IPR018517   tRNA_hU_synthase_CS       
IPR013785   Aldolase_TIM       
IPR001594   Palmitoyltrfase_DHHC       

Gene 3D

3.20.20.70    

CDD

cd02801  DUS_like_FMN

ProteinModelPortal

H9JBA2   A0A2H1VAJ1   A0A2A4JMB6   A0A3S2LSS1   S4NTX3   A0A212ERP2   + More
A0A194QL60   A0A194PKA3   A0A2A4JNY5   A0A0L7KQ81   D6WDX9   A0A026WXE5   B4N791   A0A0A9Y6K3   A0A2A3E4L6   B3MV29   E2AAB5   B4P2B2   I4DL23   B0W8T2   A0A1W4UQE9   A0A0P8ZHW2   A0A0R1DN25   A0A158NQG5   A0A1Q3F214   A0A1Q3F1I1   B3N7M4   A0A067RDJ2   B3MV32   B4JBF6   A0A1Y1M200   E0V9M0   A0A3B0JI06   A0A2J7QRU7   A0A0A1XKZ4   A0A0L0CNF3   A0A151HYM1   A0A1I8QC70   A0A0N0BJ07   B4ICU0   A0A0L7QS53   Q9VPM1   B4Q610   A0A034VG28   A0A195CAX6   Q17IV4   B4LU58   A0A3B0KE89   A0A1B6H1N2   A0A1B6DB79   W8BVL0   A0A0M4EEH4   B4KHG1   T1HT59   A0A088A3N5   A0A154NYT5   A0A1B6I9I4   A0A151WRL4   A0A1B6H0S0   B4GJP2   B5DHQ5   A0A1B6GZY2   A0A023F305   A0A195DUZ6   E9JB07   Q7Q4M3   A0A1W4WRQ0   A0A195EXM9   A0A1A9XYK2   A0A1B0BJJ5   A0A0K8VH45   A0A182HAK4   A0A182NUU9   A0A1L8DRK2   A0A1I8M936   A0A2M4CGT1   W5J422   A0A2M4CGT8   A0A182WHH0   A0A1A9UDD5   A0A182Y5J0   A0A1A9VLN0   A0A034VL44   A0A182RRK5   A0A182P3A4   N6TF58   U4U9J7   A0A182IBX4   A0A182L077   A0A1J1I0F0   A0A182LUH3   A0A182X151   A0A182VE55   A0A087UX04   A0A1A9ZZF3   A0A1B0FMX1   A0A1A9WW05   T1KAI3   A0A2P8ZNA2   A0A0N7ZBR3  

PDB

4XP7     E-value=1.35675e-26,     Score=298

KEGG

101735813    K05542 tRNA-dihydrouridine synthase 1 [EC:1.3.1.88] | (RefSeq) tRNA-dihydrouridine(16/17) synthase [

GO

GO:0050660   GO:0017150   GO:0016021   GO:0019706   GO:0008033   GO:0003824   GO:0005739   GO:0007005   GO:0031307   GO:0008270   GO:0003700   GO:0043565   GO:0055114  

Length:

463

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00273

Exp number, first 60 AAs:

0.00273

Total prob of N-in:

0.00279

outside

1  -  463

 

 

Pi

217.738305

Theta

162.624417

Tajima's D

1.079118

CLR

0

CSRT

0.68341582920854

Interpretation

Uncertain