Gene

KWMTBOMO05660  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006541

Annotation

Vacuolar_protein-sorting_protein_BRO1_[Operophtera_brumata]

Location

Bomo_Chr10(-):7490347-7493102      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.878

CDS

ATGGAACGAGAAGATGGCGAGATGAGTGATGATAATTCGATGATTATAGATGACATGGACGTCGACGACCCATTTCAAGCAACGCATGATGATTGTACTATGGTTTTCAAAGCTGAAAAAAATGGCCTTGTAGTGCAGAAGCTTGAAAAAGTTGATGCTGCAAAACTAGATGAAAGAGCTAAAAGATTTGGCCTCAATCTAACTGGAACACATACAATAACTCAGAAGCAAATAGATGAACTTTATGAAAATTGTGGTATACAAAGTGGCAATGAAAGGCACATACGTTTTGATACCATTCATTTAAATGGAGTGGATGGGCTGACAACAAAGGAAATATTTCAATACTTAGAAGATTATAAACCACTTTCATTGGAATGGATTGATGACACATCATGCAATGTGGTTTGTCAAGACCATATTTCAGCAGCATTAGCATTACTAGCTCATTCTCATGAAATCAAAGATGGTAATTTGTCAGCTGTGATTTCTGATAAAAATCATCATTGGAGGCAAGGTGTTCATCATCCTAAAAATGAAATGATTTTGATAAGATATGCTACTAATAGTGATAAAAAATTGACAAATAGGAGACAAGGCAGGCAAGTTAAAAATAGAATTGATTCAGCATTAAAAAATCCTTGGGGTGATTTGTGTAAATCGTGGGGTGTATATGATCATCAAGAAGTTTTTCAATACCAGCAATCTAGAAATGAGAAGGCAGATAACAGTGATGAAGAGGATAATTATGTAAATAGACCAGTTAAAAGTAGTAGATTAGCATCCAGGCTTGGAAAGAGAGTCTGTGAAACAAAAAGCTCTGTTGATTCTGAATATGACAATTCAGATTCAGAATGGAAAGCTAAATCAAAGGTACCGAGGATGAGGATGCATGCTGATGATGAAGAAAAAAAACAAGAAAAGAGTCGTCGTCTAATCAAATGTAGATTAGAAAGCATAAATGAATTTTCTCCATTATCTATACAAGTAGCAAATTCTAAGGGTAATTACATAAAAAGGGAAGCATCAAAACTATCAGATAAATTTAAGTATCATACATCAGAACCCAAATCAAGTGTTCAGTTACGGTTAGGTGAGAGGCTAGAGTACTCTAATGATAGTAATTCAAGTGATGAAGTTTCTGGAAATTTTGGATATAATTTTAGGAGTCAAGTGCAGAAAATTAACGATCAAACAAAAAGTGCAAGTAGCGTTTGGTCAAGATTAGACACAAATAACAGTCCTCAGAAGCACAGTGACTTGCGTAAGTTTATAACTTCAAAGAAGAAAAATGATGACCTCAGAGATAGAATAGGAAAATTAAAAAAGGAAAATTTACGTATTGAAATAGACAACTCTTCCTAA

Protein

MEREDGEMSDDNSMIIDDMDVDDPFQATHDDCTMVFKAEKNGLVVQKLEKVDAAKLDERAKRFGLNLTGTHTITQKQIDELYENCGIQSGNERHIRFDTIHLNGVDGLTTKEIFQYLEDYKPLSLEWIDDTSCNVVCQDHISAALALLAHSHEIKDGNLSAVISDKNHHWRQGVHHPKNEMILIRYATNSDKKLTNRRQGRQVKNRIDSALKNPWGDLCKSWGVYDHQEVFQYQQSRNEKADNSDEEDNYVNRPVKSSRLASRLGKRVCETKSSVDSEYDNSDSEWKAKSKVPRMRMHADDEEKKQEKSRRLIKCRLESINEFSPLSIQVANSKGNYIKREASKLSDKFKYHTSEPKSSVQLRLGERLEYSNDSNSSDEVSGNFGYNFRSQVQKINDQTKSASSVWSRLDTNNSPQKHSDLRKFITSKKKNDDLRDRIGKLKKENLRIEIDNSS

Uniprot

H9JAJ6   A0A2A4JNW3   A0A1E1WUZ7   A0A0L7L3K9   A0A3S2TE47   A0A212ERS9   + More
A0A194QME4   A0A194PKA8   A0A1E1WTR8   A0A088AIZ4   A0A154PD16   A0A2A3EJJ5   A0A151X0L4   E1ZZM4   A0A1B6GZH6   A0A0C9RIH0   A0A1B6MDI3   F4W647   A0A195DMU0   A0A232F352   A0A0L7RJ73   A0A195EQ47   A0A158P1W8   A0A195AVW4   K7IQ58   A0A026WB61   A0A151I7S5   A0A1B6CM40   E2BZZ1   D6X1B2   A0A1Y1JWS7   A0A0P4YVB5   A0A0P4YMY2   A0A0P5YQ54   A0A0P6BVU3   A0A0P6HYW8   A0A0P5QKX9   A0A0P4XTW5   A0A0P5CYI8   A0A0P5L9Y8   A0A0K2UFD2   A0A2H8TSF2  

Pubmed

19121390    26227816    22118469    26354079    20798317    21719571    + More
28648823    21347285    20075255    24508170    30249741    18362917    19820115    28004739   

EMBL

BABH01008836    NWSH01001013    PCG73112.1    GDQN01000398    JAT90656.1    JTDY01003158    + More
KOB70047.1    RSAL01000258    RVE43376.1    AGBW02012957    OWR44169.1    KQ461198    KPJ06125.1    KQ459606    KPI91530.1    GDQN01000818    JAT90236.1    KQ434874    KZC09742.1    KZ288226    PBC31907.1    KQ982611    KYQ53902.1    GL435444    EFN73367.1    GECZ01001954    JAS67815.1    GBYB01013022    JAG82789.1    GEBQ01006012    JAT33965.1    GL887707    EGI70182.1    KQ980724    KYN14147.1    NNAY01001066    OXU25266.1    KQ414582    KOC70910.1    KQ982021    KYN30410.1    ADTU01006906    KQ976731    KYM76321.1    KK107293    QOIP01000005    EZA53173.1    RLU22390.1    KQ978397    KYM94212.1    GEDC01022782    JAS14516.1    GL451708    EFN78768.1    KQ971372    EFA09513.1    GEZM01098747    JAV53774.1    GDIP01223128    JAJ00274.1    GDIP01225178    JAI98223.1    GDIP01054761    LRGB01001005    JAM48954.1    KZS14059.1    GDIP01013764    JAM89951.1    GDIQ01013609    JAN81128.1    GDIQ01119182    JAL32544.1    GDIP01240836    JAI82565.1    GDIP01179891    JAJ43511.1    GDIQ01172621    JAK79104.1    HACA01019040    CDW36401.1    GFXV01005349    MBW17154.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000283053    UP000007151    UP000053240    + More
UP000053268    UP000005203    UP000076502    UP000242457    UP000075809    UP000000311    UP000007755    UP000078492    UP000215335    UP000053825    UP000078541    UP000005205    UP000078540    UP000002358    UP000053097    UP000279307    UP000078542    UP000008237    UP000007266    UP000076858   

PRIDE

H9JAJ6   

Pfam

PF10309   NCBP3        + More
PF00076   RRM_1

Interpro

IPR035979   RBD_domain_sf        + More
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000504   RRM_dom       
IPR019416   NCBP3       

SUPFAM

SSF54928   SSF54928       

Gene 3D

3.30.70.330    

ProteinModelPortal

H9JAJ6   A0A2A4JNW3   A0A1E1WUZ7   A0A0L7L3K9   A0A3S2TE47   A0A212ERS9   + More
A0A194QME4   A0A194PKA8   A0A1E1WTR8   A0A088AIZ4   A0A154PD16   A0A2A3EJJ5   A0A151X0L4   E1ZZM4   A0A1B6GZH6   A0A0C9RIH0   A0A1B6MDI3   F4W647   A0A195DMU0   A0A232F352   A0A0L7RJ73   A0A195EQ47   A0A158P1W8   A0A195AVW4   K7IQ58   A0A026WB61   A0A151I7S5   A0A1B6CM40   E2BZZ1   D6X1B2   A0A1Y1JWS7   A0A0P4YVB5   A0A0P4YMY2   A0A0P5YQ54   A0A0P6BVU3   A0A0P6HYW8   A0A0P5QKX9   A0A0P4XTW5   A0A0P5CYI8   A0A0P5L9Y8   A0A0K2UFD2   A0A2H8TSF2  

KEGG

101745195    no KO assigned | (RefSeq) uncharacterized protein C17orf85-like

GO

GO:0006406   GO:0000340   GO:0003729   GO:0005623   GO:0000166   GO:0004930   GO:0007186   GO:0035240   GO:0016021   GO:0008270   GO:0003700   GO:0043565  

PANTHER

PTHR16291  

Length:

454

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00394

outside

1  -  454

 

 

Pi

286.34012

Theta

196.343719

Tajima's D

1.432776

CLR

0

CSRT

0.772561371931403

Interpretation

Uncertain