SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05656
Pre Gene Modal
BGIBMGA006791
Annotation
Uncharacterized_protein_OBRU01_22476?_partial_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 3.882
 

Sequence

CDS
ATGTTAAAAGAAATCGTTCTATTGCTTGGTGTTGTAACGCTGTCAAACGCCAGACCCGACTTATTGGATTTCGACTCCAGAAATGTTATAACAGTGCCCCCTAATTGTCCGGGAGGACAACAATGGATTAACGGACAATGTCGTGACGTATGGCGTAACGCTGCTACACCTTCTAACATGATCACGGTTCCTCCTAATTGCCTCCCCGGTCAAGTGTACATCAACGGACAATGTCGTGACGTATGGCGTAATGAAGCTTCCCCTTCTAACATGATCACGGTTCCTCCTAATTGCCCCCCCGGTCAAGTGTACATCAACGGACAATGGCGTGACGTATGGCGTAACGAAGCTTCCCCTTCTAACATGATCACGGTTCCTCCTAATTGCCCCCCCGGTCAAGTGTACATCAATGGACAATGTCGTGATATCTGGTTCAAGAGCATTTTTGGACTATCTGAAAAAAGGGAGCCTACCCCGTTCGCAAATTTTCCTGGAAATGATGAGCACGTATCATCTGATACGGTTGAAGCAAGAAACATTATATCTATACCGAACCAATGTCCTGCTGGTTATAGACCTGACGCTTTAGGCTATTGCCGTAAAGAATTTAACTGA
Protein
MLKEIVLLLGVVTLSNARPDLLDFDSRNVITVPPNCPGGQQWINGQCRDVWRNAATPSNMITVPPNCLPGQVYINGQCRDVWRNEASPSNMITVPPNCPPGQVYINGQWRDVWRNEASPSNMITVPPNCPPGQVYINGQCRDIWFKSIFGLSEKREPTPFANFPGNDEHVSSDTVEARNIISIPNQCPAGYRPDALGYCRKEFN

Summary

Pfam
PF01683   EB
Interpro
IPR009030   Growth_fac_rcpt_cys_sf        + More
IPR006149   EB_dom       
SUPFAM
SSF57184   SSF57184       

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.993284
 
 
Length:
204
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00942999999999999
Exp number, first 60 AAs:
0.00929
Total prob of N-in:
0.01068
outside
1  -  204
 
 

Population Genetic Test Statistics

Pi
248.499604
Theta
158.24454
Tajima's D
1.727038
CLR
0.002759
CSRT
0.83880805959702
Interpretation
Uncertain
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