SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05655
Pre Gene Modal
BGIBMGA006542
Annotation
PREDICTED:_uncharacterized_protein_LOC106720193_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 3.156
 

Sequence

CDS
ATGACACAACAGGCAAAAAGTAACTATCCACAACAACAAGGCGGAAGCTATCCTCAACCAAATAACGGCTTATCAGGTTCAGGAGCCGGAGTACCTTATCATCAAGGACAATCCCAATATACTAATAACGGAAACCAATACTACCATCCACAAGGACCTCCACCGCCATATAGTGCTGGGAACAATTTCGGAGGATATGGAAATTATAATCCAGGATACGCGTCACAAATGCCTGGATACTTTGGAAACCTTGCGAATAATGGTAGAGGGTTTGGTGGGGTTAGTCGCACAGGAAGTGCGCTTACAGGTGTTGGGATTGCAGGAGCCGGGGTAGGAACTCTTCTTACTGGATTAGCACTCTGGAACTTGGCTCGATCTACTGGAAATCGCCATCACACCGTTATTTATGATAACAGAGGACAACCGGTTGCAGTTGCACCTGCAAATGATTCTTCCCCAGCGAATGACTCATTTTTATCTGATTTAGTTAATTGTACTTTAACTATTAGCGGCGAAAAAGCTACAGAAGTACTTGCAATTCCGTGTGCAATTGCAACATCATTTTCTCCTGATGCTAATACCAAAAATATAAATTCGAACAACAATGGACAAGACGGTACGAAATGTATCGTAACTGTTATAACAAAGACAGCAAAGGAGTATATGACGACTATCCCATGTTCCGTATTGTTAAATACGGCAGCAGAAAATAATGTTACTGAGGCACCTATAGTCGAAAACGAGAAAGTCGAGATTGATACTATAAACAGCACCACAAGCCCTTTTTCAGATGACCCAAACCAAGCTGTAGCTCTAAAACTAACTACTGAAGGAAACTATGGAGGTATCAGCCAGAATAACCTTAACTGTACACCAGAACACGGTTCTATTCGAGATCCAATCAATCCGTGTTTTGCTGTTAATCAGAATCTCACAGTTATTCCAATTTCTACTACCTTGGCCACCGATGTAGTCAAGTAA
Protein
MTQQAKSNYPQQQGGSYPQPNNGLSGSGAGVPYHQGQSQYTNNGNQYYHPQGPPPPYSAGNNFGGYGNYNPGYASQMPGYFGNLANNGRGFGGVSRTGSALTGVGIAGAGVGTLLTGLALWNLARSTGNRHHTVIYDNRGQPVAVAPANDSSPANDSFLSDLVNCTLTISGEKATEVLAIPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVITKTAKEYMTTIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGNYGGISQNNLNCTPEHGSIRDPINPCFAVNQNLTVIPISTTLATDVVK

Summary

Pfam
PF02101   Ocular_alb
Interpro
IPR001414   GPR143        + More
IPR017452   GPCR_Rhodpsn_7TM       

Ontologies

Topology

Length:
326
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.66792
Exp number, first 60 AAs:
0.00311
Total prob of N-in:
0.50039
inside
1  -  98
TMhelix
99  -  121
outside
122  -  326
 
 

Population Genetic Test Statistics

Pi
212.100367
Theta
200.05862
Tajima's D
0.256301
CLR
0.370892
CSRT
0.442877856107195
Interpretation
Uncertain
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