SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05654
Annotation
Uncharacterized_protein_OBRU01_16214_[Operophtera_brumata]
Location in the cell
PlasmaMembrane   Reliability : 4.991
 

Sequence

CDS
ATGGCTGATCCAACGATTCAGACATTTTGTTGCCATCATACAGGAAGTAAAGAGGACATGGCCGTACGAATTATGGATGAATTTAACACTGATTCGTATAATATAGTATGTTTGGTTTCTTCTTCCATTGGAATCTTAGGTGCTATTTATCAGATCTTCCCAGATATTTTATCAATTACAAGACCAAGAAAGAATCTATCTCAAGGGCGAAGAATTATCATCTGGCTAGCAATTGCAGACCTGCTGGCATCTTCGGGTGTTCTAGTTCGGTCTTCTCTCTGGCTTAAATATAAAAACATAATGCCCATGCCTGGTGATGATGTCAGTGTATTATTCTGTAGTATTATTTCTGCCTGGATACAATATTTCTATACAGCAACTTGGTTTTGGACTCTTTTTTATGCCATAGATACATGGAATACTATCAAGAGGCGTGATTCGCATACAATTTTGTATCATTCTTTTGCTTGGGGACTTCCTGTAGCCACTACTAGCATCGGACTGTCAATCTTATATATTCCTAATGCAATGTGTCATAATTTACCATCAGTAACTAGTGCTTTATATAAAATTTTACCAAATTACTTTGCATCATATGTTCCAATTGCAATTGTCATGATAGCCAATCCTATAATATACATGTTTTCAAGCAAGAATGTTGAAACAGCCATATCATTACCCCTAGCGCAGTTTACCAGCAAAGAAAGAAGAGTTGTAGATGCTTTACGTTTGAAGTTCTTCTTTATCAACATTGTGTTTTACATATGTTGGCTCCCAAACCTGTTGAATGGGATACTTTTGTGGACGATGTGGTTTAGTGTACCGATAAACGCAGTAGTTGTCATTTGGTATATTATGGCTCTTCTCAACCCGATGCAAGCCTTACTGAATGCTTTAGTATATCGGAGATGGAATTTAAGTAAATGGCGTTATTCTCAGAGAAATTCGAAAATGTTTCGCCGAGATGTTATGTATTACGATGAACAATCACCATTGCTGGGCTCGGAGCCACCAAGACATCACATGTCCTCTGCTCCGCCTAGTATAAATAATTATGCAACTCTGTGA
Protein
MADPTIQTFCCHHTGSKEDMAVRIMDEFNTDSYNIVCLVSSSIGILGAIYQIFPDILSITRPRKNLSQGRRIIIWLAIADLLASSGVLVRSSLWLKYKNIMPMPGDDVSVLFCSIISAWIQYFYTATWFWTLFYAIDTWNTIKRRDSHTILYHSFAWGLPVATTSIGLSILYIPNAMCHNLPSVTSALYKILPNYFASYVPIAIVMIANPIIYMFSSKNVETAISLPLAQFTSKERRVVDALRLKFFFINIVFYICWLPNLLNGILLWTMWFSVPINAVVVIWYIMALLNPMQALLNALVYRRWNLSKWRYSQRNSKMFRRDVMYYDEQSPLLGSEPPRHHMSSAPPSINNYATL

Summary

EMBL
ODYU01006404    SOQ48216.1    JTDY01003251    KOB69877.1    NWSH01002908    PCG67315.1    + More
KQ461198    KPJ06129.1    KQ459606    KPI91534.1    AGBW02012957    OWR44173.1    GAIX01013424    JAA79136.1    KQ435863    KOX70346.1    KZ288194    PBC33948.1    KQ971371    EFA10037.1    GL449694    EFN82229.1    NNAY01001197    OXU24776.1    KQ982215    KYQ58942.1    KK107609    EZA48490.1    KQ976396    KYM93036.1    KQ981727    KYN36925.1    GL888115    EGI67170.1    KQ978691    KYN29254.1    LJIG01022761    KRT78861.1    QOIP01000014    RLU14931.1    GL435917    EFN72512.1    APGK01059060    APGK01059061    APGK01059062    KB741292    ENN70390.1    KB632349    ERL93209.1    GEZM01007507    JAV95136.1    KK852965    KDR13157.1    RLU15022.1    GEDC01023064    JAS14234.1    PYGN01001768    PSN32913.1    GEDC01016059    JAS21239.1    KQ977791    KYM99714.1    ATLV01020364    KE525299    KFB45191.1    JXUM01033192    JXUM01033193    JXUM01033194    JXUM01033195    KQ560981    KXJ80144.1    DS235206    EEB13289.1    AXCM01006213    APCN01002453    GEBQ01008927    JAT31050.1    CVRI01000010    CRK88718.1    JXUM01012233    JXUM01012234    KQ560349    KXJ82904.1    GECZ01031608    JAS38161.1    AAAB01008964    AXCN02000816    AXCN02000817    ADMH02000146    ETN67614.1    LJIJ01000103    ODN02628.1    KK854327    PTY14708.1    ACPB03024940    GBHO01040115    JAG03489.1    GBRD01006282    JAG59539.1    GBHO01017342    GDHC01013712    GDHC01013183    JAG26262.1    JAQ04917.1    JAQ05446.1    KK122473    KFM82777.1    GBBI01003699    JAC15013.1    GECL01000265    JAP05859.1    UFQS01000015    UFQT01000015    SSW97391.1    SSX17777.1    GFDF01007489    JAV06595.1    GECU01026409    GECU01005574    JAS81297.1    JAT02133.1    CH477225    EAT47143.2    ABLF02013591    ABLF02013592    QCYY01000862    ROT82194.1    GDRN01103145    GDRN01103144    JAI58132.1    GGMS01014859    MBY84062.1    GL732818    EFX64524.1    GG666563    EEN54931.1    GDIP01137305    GDIQ01044728    JAL66409.1    JAN50009.1    GDIP01242562    JAI80839.1    AMQN01008258    KB302616    ELU04074.1    JARO02000504    KPP78328.1    KP293962    AKQ63016.1    AHAT01012844    AHAT01012845    AHAT01012846    AHAT01012847    BC059806    AAH59806.1    BC065340    AAH65340.1   
Pfam
PF02101   Ocular_alb
Interpro
IPR001414   GPR143        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR017981   GPCR_2-like       

Ontologies

Topology

Length:
355
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
154.40978
Exp number, first 60 AAs:
19.16231
Total prob of N-in:
0.14198
POSSIBLE N-term signal
sequence
outside
1  -  37
TMhelix
38  -  60
inside
61  -  71
TMhelix
72  -  94
outside
95  -  113
TMhelix
114  -  136
inside
137  -  148
TMhelix
149  -  171
outside
172  -  190
TMhelix
191  -  213
inside
214  -  245
TMhelix
246  -  268
outside
269  -  277
TMhelix
278  -  300
inside
301  -  355
 
 

Population Genetic Test Statistics

Pi
126.967497
Theta
133.600399
Tajima's D
-0.270983
CLR
42.200662
CSRT
0.292435378231088
Interpretation
Uncertain
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