SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05653
Pre Gene Modal
BGIBMGA006790
Annotation
PREDICTED:_A-kinase_anchor_protein_10?_mitochondrial_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.228
 

Sequence

CDS
ATGATAAAGTTTTGGAAAAGTGCAGCAAAGGGCAAAAGCGGGTGCCCTGTGCGACCTCCTGAGAAGACTTCTGAAACTACTGTTGATTTCAATAACATACTAAGTAGTACGCAATTTCTTCATGACATTAAAGATTCTGAAGATATTTTTGAAAAGAAATCCAAGTTGTCGTTGTCATTAAATGACACTCTCCTTAAAAGAAAAGCAACTACGTATTTTATGCAATACATGGAAACCATCGGACAACATTTACTTGTTAAATGTTGGCTAGATTTGGAAGATTTCAAATCACACTTTAGAAATACAGACAATGTAGTGCTAAATATGTACGGGAATAATAAAAAATCTCAAAATTCCACTGAAGAAGCTGTAAATTTATTCAAAAAGTATATAGCTTTAGAAGCACCATATCAGATAGATATACCTGATAATGTAAGAAAATCAGTGATAACAAATATTTGTCATGTGGATGGACCGACTGAAGACTGTTTTAAGTCAGTGCAAGATATGCTATTTACTCGAATCGAAGAAAATCATTTTGGTGACTTCCTCAATACTCCACTTTATATCAAAGCACAAATAGATATACTCACAAATGGCTCTCTCCAATTGAAAGATATTTTATACAATGACACACTCTTATTTTACTTCACTGAATATTTGGAACAAGAATCTTGTAGGATATTGCTTGAATTTTTAATGGCCATTATACATTTCAGAGATAACTTAATCAATAATAATAATGATAATGCTGATCAAGCTCAAGCTGACGCCATTGTAATATACGAAAAATACTTTTCCTTACAAGCAACTAACCCACTTGGTTTCCCAACAGATATTAGACTTAAAATCGAGAGTGAAATATGTAGAGAAAACGGACCTCAGTATGATTGTTTTGATCTGCCTTATCGAATAGTTTATATGACAGTTACCCATTATGTGAAAACATTTCTTGAATCCAATATGTACTATAAATATCTTTCAGAAATGATCCACTCTGTGGATTATAATATGTCATCGCTAAATCATAAGTCTTATTCTGACTGTAGCAGTGAATATAGTGTCAGTACACAAAATACATTGCTGGCAATGGGGGATCCAGTCTTCCGAAGAAAAAAACGCAACCACTCTGTACCTGATATGACGATAGACTCTAATCAGCTTTACAATGCAGATTCACTATGGAAAAGAACTAGACATGAAGGCCTTACTTTAGGAAGAATAAATAGTTTAGGTAGGTTTGAATCCAAGTTTGAACCAGATCCAGACAAAAAAGAATCTGTTTTAAAAAAAATGGTAAATCGCTTTGTGCCAATAAGTACATCTAAAGTAGAAGAAGAAATGGCTTGGCAAATAGCCCACATGATTGTAAAAGATGTAACAGATCTGACTATGGCACCACCAGATAATGAAGAAGAAGAAATGTAA
Protein
MIKFWKSAAKGKSGCPVRPPEKTSETTVDFNNILSSTQFLHDIKDSEDIFEKKSKLSLSLNDTLLKRKATTYFMQYMETIGQHLLVKCWLDLEDFKSHFRNTDNVVLNMYGNNKKSQNSTEEAVNLFKKYIALEAPYQIDIPDNVRKSVITNICHVDGPTEDCFKSVQDMLFTRIEENHFGDFLNTPLYIKAQIDILTNGSLQLKDILYNDTLLFYFTEYLEQESCRILLEFLMAIIHFRDNLINNNNDNADQAQADAIVIYEKYFSLQATNPLGFPTDIRLKIESEICRENGPQYDCFDLPYRIVYMTVTHYVKTFLESNMYYKYLSEMIHSVDYNMSSLNHKSYSDCSSEYSVSTQNTLLAMGDPVFRRKKRNHSVPDMTIDSNQLYNADSLWKRTRHEGLTLGRINSLGRFESKFEPDPDKKESVLKKMVNRFVPISTSKVEEEMAWQIAHMIVKDVTDLTMAPPDNEEEEM

Summary

EMBL
BABH01008832    JTDY01003251    KOB69879.1    NWSH01002908    PCG67314.1    ODYU01006404    + More
SOQ48215.1    GDQN01001037    JAT90017.1    KQ459606    KPI91535.1    AGBW02012957    OWR44174.1    KQ971372    EFA10548.1    NEVH01016952    PNF24924.1    APGK01050248    KB741169    KB632294    ENN73299.1    ERL91658.1    GEZM01093750    JAV56148.1    ADTU01012004    ADTU01012005    DS235206    EEB13288.1    KQ434809    KZC06303.1    KQ976396    KYM93037.1    KZ288194    PBC33949.1    GL888115    EGI67169.1    GL449694    EFN82230.1    GFJQ02001804    JAW05166.1    AJVK01010976    AJVK01010977    AJVK01010978    KQ977791    KYM99715.1    KB203738    ESO83252.1    GBYB01010934    JAG80701.1    KQ414667    KOC64748.1    KQ978691    KYN29255.1    KQ982215    KYQ58941.1    GFJQ02008009    JAV98960.1    KQ435863    KOX70345.1    GL435917    EFN72511.1    GFAA01003271    JAU00164.1    GEDV01005154    JAP83403.1    GFPF01005632    MAA16778.1    KQ981727    KYN36924.1    QOIP01000014    RLU15023.1    KK107609    EZA48489.1    GFAC01002012    JAT97176.1    GFWV01010584    MAA35313.1    NNAY01001197    OXU24781.1    CH477471    EAT40409.1    KQ417691    KOF90750.1    JH431878    HADW01003567    SBP04967.1    CM012450    RVE63514.1    GG666503    EEN61801.1    HADW01012966    HADX01014307    SBP14366.1    HAEA01014810    SBQ43290.1    HADZ01003585    SBP67526.1    HAEF01007136    SBR44518.1    HADY01013370    HAEJ01018947    SBP51855.1    HAEH01011352    SBR92009.1    HAED01022445    SBR09200.1    HAEB01015455    SBQ61982.1    BX511157    UFQT01000560    SSX25313.1    FR904775    CDQ71567.1    HADY01005311    HAEJ01005262    SBP43796.1    GCES01162503    JAQ23819.1    AKHW03003672    KYO33775.1    HAEA01007389    SBQ35869.1    HADZ01013622    SBP77563.1    HAED01006896    HAEE01003003    SBR23023.1    NEDP02005302    OWF42224.1    HAEF01019495    HAEG01000333    SBR60654.1   
Pfam
PF00615   RGS        + More
PF12777   MT
PF17857   AAA_lid_1
PF08385   DHC_N1
PF17852   Dynein_AAA_lid
PF18199   Dynein_C
PF12780   AAA_8
PF18198   AAA_lid_11
PF03028   Dynein_heavy
PF12781   AAA_9
PF08393   DHC_N2
PF12774   AAA_6
Interpro
IPR016137   RGS        + More
IPR036305   RGS_sf       
IPR037719   AKAP10_AKB_dom       
IPR041466   Dynein_AAA5_ext       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR042219   AAA_lid_11_sf       
IPR026983   DHC_fam       
IPR013594   Dynein_heavy_dom-1       
IPR035699   AAA_6       
IPR041658   AAA_lid_11       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR042222   Dynein_2_N       
IPR035706   AAA_9       
IPR041589   DNAH3_AAA_lid_1       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR027417   P-loop_NTPase       
SUPFAM
SSF48097   SSF48097        + More
SSF52540   SSF52540       
Gene 3D
PDB
3C7L     E-value=0.0037808,     Score=96

Ontologies

Topology

Length:
475
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.005
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00744
outside
1  -  475
 
 

Population Genetic Test Statistics

Pi
224.989288
Theta
168.537498
Tajima's D
0.779299
CLR
0
CSRT
0.591170441477926
Interpretation
Uncertain
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