SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05652
Annotation
polyprotein_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 2.552
 

Sequence

CDS
ATGACGAAATTACTAGTTGTGGCATTCTGTGTTTTCTTTTGTCAATGCGTTCAGTCAGCTTCATACAATCAGAGACAAACAGGTGAACTAAATGTGCAACTCGAACTGAACGATGTTCAGATCTTTGCTTTAATGAAAGGCAAAGATGATTATGTGGATTATGATTACGCCTACGATTATTCGGAAATGACTATCAAACCATCAGGAGGCACGACACGAAAACCGTTGAATAAAACAAGTACACTTGCTTTAGTTGTAAACGATAATGTTACAACAGTTTCTTCGCTACATCAACCGTCAAAAGTTTCTACAACTGAAGGCTTGGTTTCAACTATTACTGTGGATACTGTCTCCGACATCTCTCCAACTACGGAAACAGTAAACAAACAAAATATGACTTCGCCCACGACAACGCCGAGCATTTGTAGACAAGGATTTGTTAAGAACGATAAAGGTTTATGTGAATTTAAATATGAAAATGCGTCTAATGCGTTAATGCAAATGGTAAGATTATCTCAAAAGTTAAAGAGGAGGGAAAACTAA
Protein
MTKLLVVAFCVFFCQCVQSASYNQRQTGELNVQLELNDVQIFALMKGKDDYVDYDYAYDYSEMTIKPSGGTTRKPLNKTSTLALVVNDNVTTVSSLHQPSKVSTTEGLVSTITVDTVSDISPTTETVNKQNMTSPTTTPSICRQGFVKNDKGLCEFKYENASNALMQMVRLSQKLKRREN

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.997914
 
 
Length:
180
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.01415
Exp number, first 60 AAs:
1.01399
Total prob of N-in:
0.10627
outside
1  -  180
 
 

Population Genetic Test Statistics

Pi
243.130305
Theta
176.22073
Tajima's D
0.993072
CLR
1.560975
CSRT
0.654767261636918
Interpretation
Uncertain
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