SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05649
Annotation
myosuppressin_receptor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.775
 

Sequence

CDS
ATGTCGGAAGACGAAAGCTATGGGTTTTGCTCGGAAAGTGCAACCGCTTTTCAGCGGGTCTATATCCAAGCTCACGGCTACATCGCCCTTATCATTTGTCTTCTCGGTTCCGCAGCCAATTCTGTTAATATCGCTGTACTTAGCCGGAAAGAGATGACTTCGTGCACTAATTCGATCCTCACCGGGCTCGCCGTTGCAGATCTCTTAGTTATGATCGACTATATACCTTTAGCCCTCCACCTGTACACGAAAATTGGTTCAGAATTAAATCAAAATTCTTACGGGTGGGCCGTGTTCATATATTTCCACTCAATATTCAGCCAGACCTTTCACACAATATCCATCTGGCTAACAATAATGCTCGCAGTTTGGAGATACATAGCTATTAAGTTTCCACAAAAGAACCAAACGCTGTGTAACAAGAGGAACACGACATTGGCCATAATCCTCGCGTATGCTGTATGTCCAGTATTGTGCTTGCCTATTTATTTCGCAATGAATATAAAGGAACGTCTCCCATCAGATACTTCTAACGGCACGAACGTCACACTAAACTATACAAGTGCTGCAAATGTATCAGATCCGAAACAATTTATCATAGAGATGACGAACAATAACGATTTACTAACTGCCATATTCTGGATTTATAGTGTGTTCATAAAACTAATACCATGTGTGGTTTTATCTATTTTGAGTGTGTTGTTGATCATGAAGATGAAATCGAGCGATCGAAGACGACAAAAACTATTAAAAAAATCAGCCATAACCACTACTGAGGGTGAGAAGGCGCGACTCAACGATGACGGGAAGAAAGGGGGAGGACGCACAGATCGAACGACCAGGATGCTAGTAGCACTCCTGGGACTTTTTCTCGCGACAGAACTTCCGCAGGCGTTATTTGGCTTACTGACTGCTATAGCGCCACATCTCTTCCTAATTTGCTACTACGCTTTTGGTGAAGTAATGGATCTGATGGCGCTTGTGGGGTCGGCAGTGAATTTCGTTTTGTACTGCAGCATGAGCCGACAATTCCGGACCACGTTCACGAGACTGGCGCGAAAGGTCCTGCCACTTCCACAAAGGCAGAGGGAGAGGGAGCCACTGACAACAGTCACTGTTTCGTAG
Protein
MSEDESYGFCSESATAFQRVYIQAHGYIALIICLLGSAANSVNIAVLSRKEMTSCTNSILTGLAVADLLVMIDYIPLALHLYTKIGSELNQNSYGWAVFIYFHSIFSQTFHTISIWLTIMLAVWRYIAIKFPQKNQTLCNKRNTTLAIILAYAVCPVLCLPIYFAMNIKERLPSDTSNGTNVTLNYTSAANVSDPKQFIIEMTNNNDLLTAIFWIYSVFIKLIPCVVLSILSVLLIMKMKSSDRRRQKLLKKSAITTTEGEKARLNDDGKKGGGRTDRTTRMLVALLGLFLATELPQALFGLLTAIAPHLFLICYYAFGEVMDLMALVGSAVNFVLYCSMSRQFRTTFTRLARKVLPLPQRQREREPLTTVTVS

Summary

EMBL
AB188256    AB188257    BAD89566.1    NWSH01003403    PCG66366.1    KQ461198    + More
KPJ06134.1    KT031038    RSAL01000101    ALM88336.1    RVE47526.1    KQ459606    KPI91539.1    AGBW02007576    OWR55150.1    JTDY01001631    KOB73297.1    ODYU01001558    SOQ37941.1    KPI91540.1    KPJ06135.1    NWSH01002075    PCG69243.1    KT031011    ALM88309.1    RSAL01000062    RVE49533.1    GDQN01001926    JAT89128.1    GDQN01009203    JAT81851.1    GDQN01010533    JAT80521.1    AB330434    BAG68412.1    BABH01008807    AGBW02008582    OWR52997.1    JTDY01000465    KOB77054.1    GDQN01002641    JAT88413.1    GDQN01002398    JAT88656.1    ODYU01009689    SOQ54298.1    GEDC01012998    GEDC01008232    GEDC01001774    GEDC01000521    JAS24300.1    JAS29066.1    JAS35524.1    JAS36777.1    KC004226    AGT02812.1    MG550202    AWT50636.1    AB817296    BAO01063.1    MH810182    QBC65447.1    UFQS01000739    UFQT01000739    SSX06496.1    SSX26845.1    DS231813    EDS25766.1    GEHC01000811    JAV46834.1    KK852473    KDR23127.1    CH477383    EAT42153.2    AK403711    BAM19888.1    KQ978739    KYN28879.1    KK854218    PTY13261.1    KQ981979    KYN31260.1    KQ978292    KYM95508.1    KQ976582    KYM79843.1    ADTU01001837    ADTU01001838    ADTU01001839    ADTU01001840    QOIP01000009    RLU19135.1    EU785050    ACI90287.1    BK001474    DAA01559.1    AY345586    AAAB01008900    AAR09143.1    EAA44546.3    APCN01002795    APCN01002796    APCN01002797    APCN01002798    AXCM01012235    GGMR01004189    MBY16808.1    AXCN02001018    GGMS01012053    MBY81256.1    GFXV01004644    MBW16449.1    LJIG01001123    KRT85817.1    DS235023    EEB10629.1    DS235308    EEB14579.1    OUUW01000012    SPP87623.1    GBHO01034538    GDHC01020360    JAG09066.1    JAP98268.1    CH933809    EDW18326.1    KRG06131.1    KT031018    RSAL01000235    ALM88316.1    RVE43771.1    JH431850    ABLF02019136    ABLF02019137    ABLF02060322    KQ434924    KZC11642.1    GL451937    EFN78137.1    CP012525    ALC42902.1    NNAY01001874    OXU22670.1    GECU01024873    JAS82833.1    ATLV01022793    ATLV01022794    ATLV01022795    ATLV01022796    ATLV01022797    KE525337    KFB47981.1    LBMM01008393    KMQ88921.1    KZ149917    PZC77922.1    NWSH01001613    PCG70685.1    GEBQ01027763    JAT12214.1    GDRN01064571    JAI64814.1    GDIP01241234    JAI82167.1    AB817285    BAO01052.1    LRGB01000512    KZS18464.1    KK107119    EZA58580.1    EDW18328.1    KRG06132.1    KRG06133.1    GDIP01027956    JAM75759.1    GL732530    EFX86411.1    KQ414588    KOC70442.1    MWRG01001536    PRD34048.1    AAZX01000986    KK116143    KFM66935.1    GL437132    EFN70933.1    DS231938    EDS27856.1    GDIQ01240235    JAK11490.1    CH940647    EDW69755.1    KRF84550.1    BT127571    AEE62533.1    KQ461073    KPJ09633.1    CH916366    EDV96811.1   
Pfam
PF10324   7TM_GPCR_Srw        + More
PF07525   SOCS_box
Interpro
IPR019427   7TM_GPCR_serpentine_rcpt_Srw        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
IPR036036   SOCS_box-like_dom_sf       
IPR000980   SH2       
IPR036860   SH2_dom_sf       
IPR001496   SOCS_box       
SUPFAM
SSF158235   SSF158235        + More
SSF55550   SSF55550       
Gene 3D
PDB
6A94     E-value=0.00018996,     Score=106

Ontologies

Topology

Length:
374
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
158.27511
Exp number, first 60 AAs:
25.18462
Total prob of N-in:
0.00252
POSSIBLE N-term signal
sequence
outside
1  -  24
TMhelix
25  -  47
inside
48  -  59
TMhelix
60  -  82
outside
83  -  101
TMhelix
102  -  124
inside
125  -  143
TMhelix
144  -  166
outside
167  -  213
TMhelix
214  -  236
inside
237  -  282
TMhelix
283  -  305
outside
306  -  314
TMhelix
315  -  337
inside
338  -  374
 
 

Population Genetic Test Statistics

Pi
218.350051
Theta
161.61006
Tajima's D
1.172941
CLR
106.69753
CSRT
0.710364481775911
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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