SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05642
Pre Gene Modal
BGIBMGA006786
Annotation
PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.921
 

Sequence

CDS
ATGTGTAACGAAACATTCGAACTGACGCTAATGTCTGATCTGCTGGAGCTCCTGTCGGGGTCGCTGTTGGCGGGAGATGTCGGGGACGTGGTCAGCGCCGCGCGCGCCGTCTGGGCACTCGCCGCCAACAACCACAAGGCCAAGTTGTTGTTGCGCAGTGCTGGTATACCGGCGGCCGTGCACTCTGCCTTGCAGCGGCTGCAGCGACACCAGTCCGATGCCGCCTCTATGCGAGCGCTGCAACTGCTGACCTACACCAACACCGTCTTACAAGCCACGTGA
Protein
MCNETFELTLMSDLLELLSGSLLAGDVGDVVSAARAVWALAANNHKAKLLLRSAGIPAAVHSALQRLQRHQSDAASMRALQLLTYTNTVLQAT

Summary

Uniprot
Interpro
IPR016024   ARM-type_fold        + More
IPR030791   Rotatin       
SUPFAM
SSF48371   SSF48371       
ProteinModelPortal

Ontologies

Topology

Length:
93
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.38943
Exp number, first 60 AAs:
0.38402
Total prob of N-in:
0.15080
outside
1  -  93
 
 

Population Genetic Test Statistics

Pi
226.507679
Theta
131.642098
Tajima's D
0.759684
CLR
0.001984
CSRT
0.587870606469676
Interpretation
Uncertain
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