SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05633
Pre Gene Modal
BGIBMGA006782
Annotation
hypothetical_protein_KGM_21825_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.273 Nuclear   Reliability : 1.442
 

Sequence

CDS
ATGTCTGCAGTGGGCGAACCTGTGCTTAATATAATTGTTGTAGGCTTTCATCACAAGAAGGGATGTCAGGTGGAACATTGTTATCCTGAGGTTATACCTGGTCATCCGAATGAGCTACCAGCAAGTTGGCGACATTTGCCTGCTCTAGCTTTGCCTGATGGCTCTCACAATTACCATTCGGACACAATATTTTTTAATTTACCCGGACTCACAGAACCTGCTCACACTGTATATGGAATTTCATGTTTTAGACAAATCCCTATTGAGCAAGTGACTCAAAAGACAGAGGATATGACTAGAAGTTCAGTACAAAAGAGTGTTTGTGTAATATGTCGAGCTCCATTATTCGGTCGGCTTGCCGTGAAGATGGAGCTGGTAGTGAGGGCATGGTTTCTACAAGGTGACTTTTCACAGACAACACTCCTTGAAGATGCATACAAACATTTAAATAGTTGTCCTATTCAAACAGATCAAATTCTTGAAGGTTTATCAGTACAGCGATTGGTTGAAAACTGGAGGCACAAAGCATTGTTGTTATTTAAACTTCTGTTAATAAAACGTAAGGTTCTAATTTATGGATCACCAGCTGGCCCATTGTCAACTGTATTACTTACACTTGTGTCATTGCTTCCAAAATGTATAGAGAGTGGCCTTTCAAAAGCTGCAAATGTAGTATTATCAAGACCTTTATCTCCAATACCTATTTTAATAGATAATAAAATAGAAGATGCCATTGATGATAGCTGTGAAATTTTTCCTGAATCACTATTAAATGGTTCAAGTCAAGTAGAGGAATTAACACCTAAAGAATCTGGAAATATTTTGGATGAAAAAGACAGGGTCAGTAGACAAAGTTTTGATGAGGCTATCTTAACAGATGTGACCGATAGACAAGAATTTTCTACCAGAGATAAGTGCCATAGTATTGGTGAAAAATACAAGGTTCAAAAACCTGTGATAGATGCACAGCAAAGTCCCACTATGGCTAGAGACATGAGCGTTGATGGATTACACAGTTTAACTGGTCAAATTGATCAAGAAGAATGTGGATTTCCATTTCCACTGTTTGAAGATGGCTATCTATGTTTACCGTACTTATCATTGCAGTACTTAGACATTTTATCAGATCCTGCTGTTCATGGTTTCGTTGTCGGTGCATCTAATGTATTATTTAAGCAGAAGAGGCAGCTTTTTGATGTACTTGTAGAGTTAAATGAAATGAGAATAGAAACGGCAGATATGTTGCTCAGAAGGCAGTTGGCTCTTGGAACTGAGGATCTCAGATTTGCTGATCACGTTGTTCGTCATGGCGCAACTCAGGGCGATGCATGGATTAGAGATCAATTTGCAAGTTACTTGATATATATGTTAAGGACATCTATTTTGCCAGAAGGTAGTAGAGAGATAGACATGTTCAATGCTCAATATATGGCTGCTTTTAAGTCTACACCGGGCTACGAAAAGTGGTTGAAGAATACTAATAATGGTGATGTCGAAGCTTTCATGAACCTTATTCCTATGCATCCATTTTCTGGCCAACTCTCTGTAGCTGATATGAAGTTGAAGTTGGCACATACGATGTCGACGACGGAAGGCGGCAGGAAGGTGACGGCCGCGGTGGCGAGCACGTCCCGCGCGGTGGGCGGCGCGCTCTCGCAGGCGCGCGGCGCCCTCTCGGGCTGGTGGAGTGCGCTAACTGCCCCCCCGCCGCCACCGCCCCCGCCCCCCTCACCGCCGACCTCGCTCACTCCCGACCCGCCCGACGACCCCACAGACGCTACTGACATCACTGTGGTTTGA
Protein
MSAVGEPVLNIIVVGFHHKKGCQVEHCYPEVIPGHPNELPASWRHLPALALPDGSHNYHSDTIFFNLPGLTEPAHTVYGISCFRQIPIEQVTQKTEDMTRSSVQKSVCVICRAPLFGRLAVKMELVVRAWFLQGDFSQTTLLEDAYKHLNSCPIQTDQILEGLSVQRLVENWRHKALLLFKLLLIKRKVLIYGSPAGPLSTVLLTLVSLLPKCIESGLSKAANVVLSRPLSPIPILIDNKIEDAIDDSCEIFPESLLNGSSQVEELTPKESGNILDEKDRVSRQSFDEAILTDVTDRQEFSTRDKCHSIGEKYKVQKPVIDAQQSPTMARDMSVDGLHSLTGQIDQEECGFPFPLFEDGYLCLPYLSLQYLDILSDPAVHGFVVGASNVLFKQKRQLFDVLVELNEMRIETADMLLRRQLALGTEDLRFADHVVRHGATQGDAWIRDQFASYLIYMLRTSILPEGSREIDMFNAQYMAAFKSTPGYEKWLKNTNNGDVEAFMNLIPMHPFSGQLSVADMKLKLAHTMSTTEGGRKVTAAVASTSRAVGGALSQARGALSGWWSALTAPPPPPPPPPSPPTSLTPDPPDDPTDATDITVV

Summary

Similarity
Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
EMBL
BABH01008780    ODYU01009430    SOQ53849.1    NWSH01000460    PCG76245.1    AGBW02012332    + More
OWR45205.1    KQ461198    KPJ06148.1    KQ459606    KPI91556.1    GDQN01004286    JAT86768.1    APGK01059304    KB741292    ENN70483.1    KQ983106    KYQ47397.1    KQ979479    KYN21345.1    GBYB01006161    JAG75928.1    ADTU01013722    ADTU01013723    GL888103    EGI67370.1    KQ976736    KYM76035.1    GL768057    EFZ12743.1    KQ978287    KYM95628.1    KQ435840    KOX71463.1    ACPB03009319    GL446678    EFN87413.1    KQ981490    KYN41372.1    KB632203    ERL90078.1    LBMM01000675    KMQ97810.1    KZ288344    PBC27661.1    GL438827    EFN68245.1    KQ414612    KOC69142.1    KK107295    QOIP01000009    EZA52975.1    RLU18761.1    GEBQ01024730    JAT15247.1    NNAY01002633    OXU20890.1    GBBI01003052    JAC15660.1    GDHC01008980    JAQ09649.1    GBHO01021896    GBRD01006686    JAG21708.1    JAG59135.1    KQ972669    KXZ75822.1    GFDL01003027    JAV32018.1    AAAB01008846    EAA06436.5    GFDL01003046    JAV31999.1    ABLF02024512    NEVH01024022    PNF17496.1    ATLV01013122    KE524840    KFB37255.1    KXZ75821.1    GFXV01003272    MBW15077.1    CH902625    EDV35107.1    ADMH02000649    ETN65459.1    GBGD01000782    JAC88107.1    CH933810    EDW07475.1    CCAG010013941    AE014298    AY061257    AAF48291.1    AAL28805.1    AXCM01001058    CM000162    EDX01596.1    CH916370    EDV99746.1    CH940651    EDW65913.1    GFXV01007416    MBW19221.1    CH477257    EAT45825.1    APCN01001239    KRF82475.1    KRF82476.1    CH983913    EDX16589.1    JXUM01116069    KQ565945    KXJ70507.1    CH954180    EDV47182.1    OUUW01000011    SPP86547.1    GFDF01010533    JAV03551.1    GBXI01003141    GBXI01001174    JAD11151.1    JAD13118.1    AXCN02001229    CH479196    EDW27506.1    CH379064    EAL31780.2    GDHF01027661    JAI24653.1    KQ435163    KZC14924.1    CH963851    EDW75097.1    GFDF01010602    JAV03482.1    JXJN01025121    JXUM01139898    JXUM01139899    KQ568972    KXJ68814.1    JRES01000984    KNC26474.1    LJIG01009892    KRT82172.1    GL732524    EFX89542.1    GDIQ01010408    JAN84329.1    GDIP01040800    LRGB01003123    JAM62915.1    KZS04515.1    LNIX01000042    OXA38924.1    UFQS01000315    UFQT01000315    SSX02742.1    SSX23114.1    GAKP01018716    GAKP01018713    JAC40239.1    GDIQ01044560    JAN50177.1    GDIP01120840    JAL82874.1    GDIP01013823    JAM89892.1   
Pfam
PF09794   Avl9        + More
PF00060   Lig_chan
PF10613   Lig_chan-Glu_bd
Interpro
IPR037516   Tripartite_DENN        + More
IPR018307   ABL9/DENND6_dom       
IPR001508   Iono_rcpt_met       
IPR019594   Glu/Gly-bd       
IPR001320   Iontro_rcpt       

Ontologies

Topology

Length:
599
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.830029999999998
Exp number, first 60 AAs:
0.00036
Total prob of N-in:
0.03030
outside
1  -  599
 
 

Population Genetic Test Statistics

Pi
274.397625
Theta
181.68492
Tajima's D
1.453155
CLR
0
CSRT
0.781560921953902
Interpretation
Uncertain
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