SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05631
Pre Gene Modal
BGIBMGA006552
Annotation
PREDICTED:_serine/threonine-protein_kinase_tousled-like_2_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.151
 

Sequence

CDS
ATGGAGCACTTCCAGGCGGCGCTGGATCCTCGCAAGCAGGAGCTTCTCGAAGCACGATTCTTAGGAGCCAAAGTCACAGCAAGGGAGATAATAGTAGAAACTCATCGTGCTCCAGAATTCAAAATGATGTCAGCTGGTTCACAAATTCAGATGGCACCACAAACTACTGTCAACACGGGGCAACCGCTACACAGTCAGGACTCCAATATGAGCACAGGGTCATCTCATAGTGATAAAGAAGTTGATGCTTTAACTCCGGAGAAGTCTGTAGCTATGCGAGGCTCAACTGCTGCGTCAGGCACAGTCCTGGTTGCTCCTGGTGGTGCCACACCTACCATAACAATGCCGGAGAGGAAGCGAAAACGAAAAGGAGATGAAGGAGTTGGTGGTGGTGGGGGTGGAGGAGGAAAGCAACGCCATAACTCGTCAGATAAAAATATACGAGAATATTTCTCAAAGCACCCCTCGTCCAGTCCTGTAAGGCATGCTGGAGCTAAATCCCCCTCGCCTCAAGGCGCCAATTATCCTATGTACCCACCGTCACCTTCATCACTATTGCCAGGAGCTGACTTCATGCGAGCAGCTTCTCAACAAAGACCTCACACATCAGTTAAACAGATTCAGACAGAAATGACATGTCAGAGGATACAAGAGTTAGAAACTCAGGCATCTTCTGATTTAGAACTAAGAAATAATAAAATAGATGAATTAACACGGACAAATGAAGAGCTAAAGCATCAAGTGCAAGCTCAAAATAAGGTGATTGAACAACACAAATCACACATCAACAAATGTATAGAAGTAGTTAAGAAATTGTTGAATGAAAAAAGTACTATTGAAAAGAAGGAAGCCCGACAGCGCTGCATGCAAAATAGACTGAGGCTAGGCCAGTTTGTCACGCAACGCGTCGGTGCCACCTTTCAAGAAAATTGGACTGATGGATATGCATTTCAAGAGCTAACAAGGCGACAAGAAGAGATTACAGCGGAGAAAGAGGAGATAGATCGGCAGAAGAAACTGTTGTTCAAAAAGCGTCCAGTGAACACAGAGGGCGGAGGGGGACGCGGCAAGCGAACAGCCAGCGCCGCCCCTTCCACGCCCCAACCTTCGCCGTTACATAACGGCACTGACGCACCCACCTTCCTCAAGCCAGACCCACTACCCAGCATGACCTACCAAGAGTACTATGAGGCTGATGAAATTCTTAAGTTAAGGCAGAGTGCACTAAAAAAAGAAGATGCAGATTTACAGCTAGAAATGGAAAAGTTAGAAAGAGAAAGGAACCTTCATATTAGGGAATTGAAACGAATACACAATGAAGACCAGAGCCGTTTCTCACAGCATCCTGTGCTCTCTGAACGGTATTTACTGCTGATGCTGCTCGGCAAGGGTGGATTCAGTGAAGTACACAAAGCGTTCGATCTAAAGGAGCAACGATACACCGCGTGTAAAGTGCATCAGCTCAACAAAGACTGGAAGGAAGACAAGAAAGCCAATTATATCAAACACGCACTACGGGAGTACAACATCCATAAAGCCCTGGATCACCCTCGCATCGTAAAACTGTACGATGTATTCGAAATCGACGGAAATTCGTTTTGTACAGTACTTGAATACTGTAATGGACATGATCTCGACTTTTATCTCAAACAGCACAAAACAATCCCGGAGCGTGAAGCGCGTTCCATTGTGATGCAAGTGGTGTCAGCATTAAAGTATCTGAACGAAATAAAACCACCTGTCATTCACTATGATCTGAAACCCGGGAATATTCTACTAACGGAAGGCAATGTTTGTGGCGAGATCAAAATTACAGACTTTGGCCTCTCCAAAGTAATGGACGAGGAGAACTACAATCCTGACCATGGCATGGACTTGACCAGCCAGGGAGCCGGTACATACTGGTATCTGCCACCGGAATGTTTCGTCGTTGGAAAAAACCCACCAAAGATAAGTAGTAAGGTGGATGTTTGGAGTGTGGGTGTTATCTTCTACCAGTGCCTGTATGGAAAGAAGCCGTTTGGCCACAACCAGAGCCAGGCCACTATATTGGAAGAAAACACCATACTAAAGGCAACTGATGTTCAGTTTGCTAACAAACCCACAGTCAGCAATGAGGCTAAAGTGAGTACAACATAA
Protein
MEHFQAALDPRKQELLEARFLGAKVTAREIIVETHRAPEFKMMSAGSQIQMAPQTTVNTGQPLHSQDSNMSTGSSHSDKEVDALTPEKSVAMRGSTAASGTVLVAPGGATPTITMPERKRKRKGDEGVGGGGGGGGKQRHNSSDKNIREYFSKHPSSSPVRHAGAKSPSPQGANYPMYPPSPSSLLPGADFMRAASQQRPHTSVKQIQTEMTCQRIQELETQASSDLELRNNKIDELTRTNEELKHQVQAQNKVIEQHKSHINKCIEVVKKLLNEKSTIEKKEARQRCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELTRRQEEITAEKEEIDRQKKLLFKKRPVNTEGGGGRGKRTASAAPSTPQPSPLHNGTDAPTFLKPDPLPSMTYQEYYEADEILKLRQSALKKEDADLQLEMEKLERERNLHIRELKRIHNEDQSRFSQHPVLSERYLLLMLLGKGGFSEVHKAFDLKEQRYTACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRIVKLYDVFEIDGNSFCTVLEYCNGHDLDFYLKQHKTIPEREARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDEENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATDVQFANKPTVSNEAKVSTT

Summary

EMBL
NWSH01000460    PCG76244.1    ODYU01009430    SOQ53851.1    AGBW02013690    OWR42959.1    + More
KQ459606    KPI91558.1    BABH01008774    BABH01008775    GAIX01005592    JAA86968.1    KQ461198    KPJ06153.1    NEVH01024022    PNF17497.1    GEZM01049901    JAV75772.1    KK853163    KDR10419.1    PNF17499.1    PNF17498.1    KQ972669    KXZ75819.1    GFTR01007995    JAW08431.1    GBBI01002294    JAC16418.1    PYGN01001675    PSN33437.1    JTDY01001642    KOB73264.1    GEZM01049903    GEZM01049902    JAV75771.1    GBHO01023636    JAG19968.1    ADTU01013723    ADTU01013724    ADTU01013725    ADTU01013726    GEDC01020348    JAS16950.1    QOIP01000009    RLU18758.1    KQ434959    KZC12630.1    KQ435840    KOX71461.1    KXZ75820.1    LBMM01005662    KMQ91321.1    GDHC01022015    JAP96613.1    GALX01003656    JAB64810.1    GDHC01001013    JAQ17616.1    GGMS01011788    MBY80991.1    ABLF02023323    GECL01002818    JAP03306.1    GL438827    EFN68243.1    KQ414612    KOC69137.1    GBHO01023634    JAG19970.1    KQ981490    KYN41378.1    KQ978287    KYM95626.1    KQ979479    KYN21351.1    KQ976736    KYM76031.1    KQ983106    KYQ47394.1    GL888103    EGI67368.1    GL446678    EFN87411.1    KK107295    EZA52978.1    GL768057    EFZ12748.1    KK856888    PTY26529.1    PTY26528.1    GGMR01003582    MBY16201.1    GFXV01006769    MBW18574.1    GDKW01002529    JAI54066.1    APGK01059220    KB741292    ENN70465.1    KB632186    ERL89683.1    DS235813    EEB17462.1    GDHC01015048    JAQ03581.1    GFDF01007128    JAV06956.1    AJWK01018459    AJWK01018460    AJWK01018461    AJWK01018462    AJWK01018463    AJWK01018464    GANO01001407    JAB58464.1    UFQT01003226    SSX34771.1    SSX34770.1    CVRI01000054    CRK99963.1    GDUN01000941    JAN94978.1    CH478258    EAT33395.1    GFDL01013879    JAV21166.1    GFDL01013813    JAV21232.1    GFDL01013825    JAV21220.1    GFDL01013868    JAV21177.1    JXUM01105294    KQ564954    KXJ71513.1    GDAI01002555    JAI15048.1    AXCM01003876    LNIX01000007    OXA52044.1    DS232022    EDS32315.1    GGLE01002572    MBY06698.1    GFWV01009534    MAA34263.1    QCYY01002813    ROT67408.1    JH431989    GFJQ02001870    JAW05100.1    GACK01005152    JAA59882.1    GEDV01009424    JAP79133.1    GFAA01002119    JAU01316.1    GEFH01003687    JAP64894.1    GFPF01012537    MAA23683.1    GFAC01003654    JAT95534.1   
Pfam
PF00069   Pkinase        + More
PF04774   HABP4_PAI-RBP1
Interpro
IPR000719   Prot_kinase_dom        + More
IPR017441   Protein_kinase_ATP_BS       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR006861   HABP4_PAIRBP1-bd       
IPR027086   TLK2       
SUPFAM
SSF56112   SSF56112       
PDB
5O0Y     E-value=1.32367e-170,     Score=1542

Ontologies

Topology

Length:
712
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03628
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.00175
outside
1  -  712
 
 

Population Genetic Test Statistics

Pi
287.501273
Theta
218.42359
Tajima's D
0.799878
CLR
0.343843
CSRT
0.610819459027049
Interpretation
Uncertain
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