Gene
KWMTBOMO05629
Pre Gene Modal
BGIBMGA006557
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 4.081
Sequence
CDS
ATGAAGGAATCGACAGCGCGATGTGAAGATGTGGCTGACAAGCTGGTGAGGCTGTTCGGATGGAGACAGACTTATCCTGTGCAGAAGCTACAGAGGAGCATTATGCCCCAGGGCGCTGAAACGGGTCCAGAAACGTGGATTGGAGTTCGAGCTCTTCGAGCCAATTCCGGTGGCATTCTAGATCCAGATGATCGAGTTTGTGATGTCGCCGACGACCGTGAAACCCTCACCGCTGAGTGTACCAGTCAAACGCCTCAACCAAGGGCGGCACAAGCAGATGGCGCTAGTGGATCATCAGCTGGCACTGCTTCTCCTGACATGTTTCGGGGAGGCGGTGGGGTCGGTGGGAGCATTCGGGTTCCCCACCCTGACTCCTGTGTGGAGGTGGGCGAGGCTGACCTCGAAGATGGCGTTAATGGGCTGCAGGTCAGACGAGGCAGTGAACCATCCTTACACCAGGATACCTTACCTCCCCAAAGACAGGTGTCAGAACAGACGAAACGCTGGTCGGCGGCGGTGGTCGGACGAGACGATTGCACCCGCATCACGCAGAAAGTGCATCCGATGTCGGACGGACGACAGCCGGACTCCAATGTCGAACGACACGGGCACTCCGGTCAACACTTTCAGAGGCAGTCTAATAGGTTATCTATGCAGTTTTCCGGGCCAGGGAGTGGCGTGTGGTTAGATGCAGCCGAACGAATACAGAGTTACGGCAGCAAGAGCTTACCGCGCGACGCCAGGAGAGAGCCGCTGGGACAGGACACGTCTTCTGTTAACGACCATCAAAACCATAGAGTAGAAGACATGCTCCGATGGGTGACGGGAGTTAACAACGTGGCCAGTGCTCATTCAATTCAAGAGCGCCCTCTCGATCTCTTACCTGAAGGGGGAAGCGAACGCGCGATCACAGGGCTGGAAGTACCCGTGAGTCCGAGCACTAAGCACGTCAGTGGCGCCACACAAACCGTTTCCGTAACTCTGGTCAAGGGCGAGAAGGGACTTGGCTTCACGATCACGACAAGGGACAACCCTACCGGAGGACATTGCCCTATTTATATCAAGAATATTTTACCAAAGGGTGCAGCGGTAAGTGACGGTCGTCTCCGAGCCGGAGATAAACTAGTCTCAGTCAATAACGTCTCGGTGTCGGGACTCACTCAACAACAAGTCGTCGCTCTGCTGAGGAACACTCCCACCGACTCCACTGTCGACATCGTCATTGAGAGAACTGTTCCTAATCGGACACAGAGGGTAGAGCCCCAACAAAGTCCAACAAAATACGTGGAGAAAGCCATCGGCACCCCGAACCCCCCGAAACAAGCAGAAGCTGGCGCTGGACCAGAAAATGGTCGAGTTTCCAGTATAGTGAACGCGATCAATCAGAATAACCCCAACAGCTCAATGAGAGGCAGGATACCGAAGAGCTCTTCCAAAGATGATCTATTGAGTAAAGAGCAGACTCCGGATAGTGCGCTACAAGACGCTTTAAATACTTCTTCGGGCTCTATATTAGGTTTAAGAAATCGCCTAATACTTCGACTTGATGTGCCGGTTCATGACTCCGAGAAGGCCGGGCTGGGTATTAGCGTTAAAGGCAAAGTGACTGTTGGACCAGACCCACAAGACTTGGGTATATTCATCAAATCAGTATTAAACGGCGGAGCTGCATCTCGAGACGGAAGATTACATACGAACGATCAGCTCCTGAGTGTGAATGGCGTGTCGTTGGTGGGTCAGTCCAACGCTGAGGCGATGGAGACACTGCGAAGGGCGTTGCTGCACGCCCGGCCGCAGAGGAGTGGCAGTATATCTCTTACTATCGCCAGGAGAACAGAAAGTATGGACAGCCTGGCGAGGTGGAAAGACGACACTCCACCGAACGGCAACGACACGACCAGCTCCAACGACAACTCGCAGAACTTCAACACCGTCATATACACGTCCAGCGACAAGGAGAACAAGCCTACCGACAACCACAACTACGACGCCAACAAGAACGAGGCCTTCGATAGCCACGAAGCAAGAACCGGCCCCAAAAAACACGCTTCCATAGTCACCATAAACAACAACAGCAGCTGGGTCTCAAACCAATCCGATGACACTAAAGGGTATTTAGAGAGAGATAAGGATGTACCTCACGACGCCAAAAGGGATAGTTTCGAGTGGAGTCGGCTTGATGGATGGAACCCAGTGATCGATAGATTGACGGGACTAAGAAACGAGAGCTATTACATGGCAACCCAGGTCGATGTTCCGCAAATGAATGGACATCATTATAGACAGAATCTAGGACACGTACATATGTCTCGATCGCCGCCGGCTCATCACAACGTTATCATTGAAGAGGACTATGGTACGACGAGGTGA
Protein
MKESTARCEDVADKLVRLFGWRQTYPVQKLQRSIMPQGAETGPETWIGVRALRANSGGILDPDDRVCDVADDRETLTAECTSQTPQPRAAQADGASGSSAGTASPDMFRGGGGVGGSIRVPHPDSCVEVGEADLEDGVNGLQVRRGSEPSLHQDTLPPQRQVSEQTKRWSAAVVGRDDCTRITQKVHPMSDGRQPDSNVERHGHSGQHFQRQSNRLSMQFSGPGSGVWLDAAERIQSYGSKSLPRDARREPLGQDTSSVNDHQNHRVEDMLRWVTGVNNVASAHSIQERPLDLLPEGGSERAITGLEVPVSPSTKHVSGATQTVSVTLVKGEKGLGFTITTRDNPTGGHCPIYIKNILPKGAAVSDGRLRAGDKLVSVNNVSVSGLTQQQVVALLRNTPTDSTVDIVIERTVPNRTQRVEPQQSPTKYVEKAIGTPNPPKQAEAGAGPENGRVSSIVNAINQNNPNSSMRGRIPKSSSKDDLLSKEQTPDSALQDALNTSSGSILGLRNRLILRLDVPVHDSEKAGLGISVKGKVTVGPDPQDLGIFIKSVLNGGAASRDGRLHTNDQLLSVNGVSLVGQSNAEAMETLRRALLHARPQRSGSISLTIARRTESMDSLARWKDDTPPNGNDTTSSNDNSQNFNTVIYTSSDKENKPTDNHNYDANKNEAFDSHEARTGPKKHASIVTINNNSSWVSNQSDDTKGYLERDKDVPHDAKRDSFEWSRLDGWNPVIDRLTGLRNESYYMATQVDVPQMNGHHYRQNLGHVHMSRSPPAHHNVIIEEDYGTTR
Summary
Uniprot
EMBL
Proteomes
PRIDE
SUPFAM
SSF50156
SSF50156
ProteinModelPortal
PDB
2K20
E-value=5.40662e-21,
Score=252
Ontologies
PATHWAY
GO
Topology
Length:
789
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00030
outside
1 - 789
Population Genetic Test Statistics
Pi
250.687875
Theta
171.509735
Tajima's D
1.402965
CLR
0.363223
CSRT
0.761061946902655
Interpretation
Uncertain
