SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05626
Pre Gene Modal
BGIBMGA006559
Annotation
PREDICTED:_sn1-specific_diacylglycerol_lipase_beta_isoform_X2_[Plutella_xylostella]
Location in the cell
PlasmaMembrane   Reliability : 4.508
 

Sequence

CDS
ATGGCCCGAATGCCGGCGCTCCGTCTTCTCGGACGCAAATGGCTGGCAGCCTCGGATGATCTCGTCTTCCCAAGCATTTTCGAATTACTCTTTCGATTCGTGTGGTTGGTACTAATAGCTTTGGTCGTAGAGGTTCTATATCCAGTGACATGGCAGTGCCAGACGGACGGTTGGCACGGCGGCTCTTTCGTCCGATTATACTTATGCGGTACCCTCACACTTCAGGCAGCCTTAATGCTGTTACTTGCTGCTTTGGCTCACCAGTCCGCCAGAGGGACCATTACAGATGTAGACATCAGAAAACTGGTATCACCATTACTATTAATCAAAGTGCTTCTGGTGTTGCCGGAAACAGCCCTCAATGTGATGGGTACTATGTGGATGTTCTGTGAAGTTATCGAGTGTTCAGTTGACGATAAATTCTCTAGCATAGTTATACAAAGTATAGTATTATTCAATTGGGTGCAACTAGGACTGACAGTGTTTGGGCTTTTCATGGTGTTCGATCCCTTGGGTTCAGTTAACTATGGAGATATGCAGGACACACCCAACCAAGTGCGCCATCATAGGAAAGTCACCGGTCTTTGGTCTCGGAGGTTCAGATGGGCGTTTTGTTGGCTGAAGAGAGACGAACATGGGAAGGAAGCATTTCAACAAGTTGCAGCACTGCTCAGCGCCTTGTTTCGATCCACGGACTTAGTACCATCTGACGTGGTAGCAGGATGTGTTCTGCTCAGAGTCAGACAGAAACGAGAAACTAGAGAAATGCGACGTATTCAAATGCTAAACGACGAAGAGCCTATTTATACGACGGACGTAAACAAGATATTCTCCGAAACCCCACCGTGGATGAATTTAGACGATGCCCTCTACTATCTCAGATTATCAATCGCTGCATATGGTTGGCCGTATGTTTTATACCGTCATTGCTTCACTGGCTTCTGCAAATTGGCCACCCACTTAACTTGTTGCTGTTGTCGTCCGAAAAATTCTATAGTAACGGACGACAACTGCTGTTTGTGTAACTTCGCTGGAGTCAAATACATGTCCAAATTACCTGCCGATGACATTATTTTCGCTTCCTTCAATAACAAAGTTTTTGAGTTGCCGTTCTGTGTGATAGCTGATCATGAACGCGAGTGTATAGTTGTGGCGGTGCGAGGGTCCATCTCACTCCGAGATATCTTCACGGATTTCACTGCTGGCTCCGAGAAATTTGAAGCTGACGGTTTACCAGAAAACACGGCAGCCCACAAAGGCATGGCAATGGGTGCGAACAAAATGTTGAAACGACTTTTACCGGTTCTCGACCGGACATTCCAGCAGTTTCCGCACTATGACCTAGTACTTACAGGTCACAGCTTAGGCGCTGGTGTAGCAGTATTAGTAGCTTTAAAATTACGACCGAGATACCCACATCTCAAAGTGTACGCGTTTTCAACGCCAGCGGGACTAATAAGTAGAGAAGCGGCGAGGTACACGGAGAGCTTTGTACTCACTGTGGGGGTCGGAGACGATTTGGTGATGAGGCTGAGCGTGCATAGTATAGAAAACCTTAGGACAAAAATCATTCAGACTATACACGCTACCAAACTACCTAAGTACCGAATAATGCTGAATGGCTTCGGTTACGCGTTGTTCGGTGTGCCCGCTCGCGACTTGGAGTCGACGTGGCGCCGCCCTGAGGACCTGGAGGCGACGCACTCGGACGACTCCGCTGACGCTCTCCTCGTGCCGAGCGTCTCCACCGAGGCTGCGTTAGTGTCGCGGGATATATTCGTGCGAAGATTCTCGTCAGCACGACTTTTCACTGCGGGGCGGATCTTGCACATCGCTCGACGTAAGCGCATGGGGATCGAAAAAAAAGTGCGCACGCAAGAGCCAACATATGAGATGCGCTGGGCCTGTCCCGAAGACTTCATGGAGTTACAAGTCATGCCTCGCATGCTATTGGACCATCTGCCCGAAAACGTTCATCGCACCATTCAAACAATAATCGAGGAGAGACATACTTACCGCGTCACGCACATAGTTTAG
Protein
MARMPALRLLGRKWLAASDDLVFPSIFELLFRFVWLVLIALVVEVLYPVTWQCQTDGWHGGSFVRLYLCGTLTLQAALMLLLAALAHQSARGTITDVDIRKLVSPLLLIKVLLVLPETALNVMGTMWMFCEVIECSVDDKFSSIVIQSIVLFNWVQLGLTVFGLFMVFDPLGSVNYGDMQDTPNQVRHHRKVTGLWSRRFRWAFCWLKRDEHGKEAFQQVAALLSALFRSTDLVPSDVVAGCVLLRVRQKRETREMRRIQMLNDEEPIYTTDVNKIFSETPPWMNLDDALYYLRLSIAAYGWPYVLYRHCFTGFCKLATHLTCCCCRPKNSIVTDDNCCLCNFAGVKYMSKLPADDIIFASFNNKVFELPFCVIADHERECIVVAVRGSISLRDIFTDFTAGSEKFEADGLPENTAAHKGMAMGANKMLKRLLPVLDRTFQQFPHYDLVLTGHSLGAGVAVLVALKLRPRYPHLKVYAFSTPAGLISREAARYTESFVLTVGVGDDLVMRLSVHSIENLRTKIIQTIHATKLPKYRIMLNGFGYALFGVPARDLESTWRRPEDLEATHSDDSADALLVPSVSTEAALVSRDIFVRRFSSARLFTAGRILHIARRKRMGIEKKVRTQEPTYEMRWACPEDFMELQVMPRMLLDHLPENVHRTIQTIIEERHTYRVTHIV

Summary

EMBL
NWSH01000455    PCG76289.1    AGBW02005235    OWR55327.1    KQ459606    KPI91566.1    + More
KQ461198    KPJ06160.1    ODYU01001079    SOQ36811.1    RSAL01000073    RVE48986.1    BABH01008753    KQ971371    EFA10154.1    GEZM01068218    GEZM01068217    JAV67084.1    ATLV01027094    KE525423    KFB53894.1    AJWK01034779    AJWK01034780    GGFK01002915    MBW36236.1    GGFJ01002815    MBW51956.1    GGFJ01002608    MBW51749.1    DS232102    EDS34851.1    GFDL01009221    JAV25824.1    GGFJ01002641    MBW51782.1    GFDL01009225    JAV25820.1    ADMH02001047    ETN64330.1    AXCN02001682    KB632092    ERL88670.1    AJVK01003331    AJVK01003332    DS235000    EEB10180.1    APCN01003270    GANO01000578    JAB59293.1    AAAB01008986    EAA00159.4    CH477195    EAT48404.1    UFQT01003133    SSX34626.1    UFQS01001411    UFQT01001411    SSX10754.1    SSX30436.1    SSX10755.1    SSX30437.1    CVRI01000073    CRL07735.1    NEVH01000610    PNF43369.1    NNAY01002745    OXU20644.1    QOIP01000003    RLU24821.1    KK107144    EZA57566.1    GL435746    EFN72777.1    SSX34627.1    GEDC01025992    GEDC01023382    JAS11306.1    JAS13916.1    KQ980155    KYN17467.1    GBBI01002983    JAC15729.1    GL451645    EFN78859.1    KQ976526    KYM81960.1    KQ982482    KYQ55909.1    GFXV01005623    MBW17428.1    GL888763    EGI58098.1    ABLF02036577    KQ981424    KYN41860.1    GL762903    EFZ20552.1    ADTU01018184    ADTU01018185    GGMS01010363    MBY79566.1    GBYB01013162    JAG82929.1    KQ434900    KZC11064.1    KQ976818    KYN08075.1    APGK01038131    APGK01038132    APGK01038133    KB740953    ENN77119.1    GBHO01034047    GBHO01034046    GBHO01034044    GBHO01034042    GDHC01006198    GDHC01003484    GDHC01001233    JAG09557.1    JAG09558.1    JAG09560.1    JAG09562.1    JAQ12431.1    JAQ15145.1    JAQ17396.1    GEBQ01021734    JAT18243.1    KK852453    KDR23659.1    KQ759891    OAD62108.1    GEBQ01025638    JAT14339.1    PNF43368.1    GFTR01007567    JAW08859.1    KQ414716    KOC62809.1    CVRI01000054    CRL00123.1    GEDC01003538    GEDC01002660    JAS33760.1    JAS34638.1    KZ288522    PBC25090.1    GBHO01022391    GBHO01001142    GBHO01001141    GBHO01001137    JAG21213.1    JAG42462.1    JAG42463.1    JAG42467.1    GDHC01014651    JAQ03978.1    GBRD01001345    JAG64476.1    PYGN01000212    PSN51081.1    GECU01030266    JAS77440.1    GECU01009591    JAS98115.1    KK857087    PTY26804.1    QCYY01001152    ROT80111.1    GL732568    EFX76477.1   
Pfam
PF01764   Lipase_3
Interpro
IPR029058   AB_hydrolase        + More
IPR002921   Fungal_lipase-like       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
5CH8     E-value=1.62479e-09,     Score=152

Ontologies

Topology

Length:
678
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
101.75976
Exp number, first 60 AAs:
22.80813
Total prob of N-in:
0.93598
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  62
TMhelix
63  -  85
inside
86  -  105
TMhelix
106  -  128
outside
129  -  142
TMhelix
143  -  165
inside
166  -  289
TMhelix
290  -  307
outside
308  -  678
 
 

Population Genetic Test Statistics

Pi
219.251652
Theta
169.054193
Tajima's D
0.90766
CLR
0.201673
CSRT
0.64206789660517
Interpretation
Uncertain
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