Gene

KWMTBOMO05625

Pre Gene Modal

BGIBMGA006780

Annotation

PREDICTED:_spatacsin_[Bombyx_mori]

Location

Bomo_Chr10(+):6603499-6622751      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.432

CDS

ATGGAGGGCCTAAATCAAAATGAAAAAGTAATATGGTCGTGCTGGGAAGAAAAATCACCTAGAGATGTTGTTAGAGAAGCAGCGGCTAAAGGCACTCATTTAACACTAGCTATCAAATATTTGATGGAAAAAAACAGTTGGAATGAGGAAAGTGCCCGAGATTGGTTTATTGCAGAGGTGAAAGTATGGACTGTCCAGTTGCTGTTAAGAAAACAAATATTTAAAGTTCTCCATGTATTAAGCAAAGTTAAAATAAACCCAGAAGAACATCTGATGTCTCTTGCTGAAACTTCAAGTGCAATAGAATACAGGGATTTTCTTGTGGAACAATTAGAAAAGATATCAAAAGACATGTTGAGTGAAAACATTCCAAAATGGTTAGAATTCAAGCGACATTGGAATTTACTAAGATATTTAGAAAAGTCATTTCAGATTGATGGCACTTATAAACAGAATAAAGTGTTTGGCACAGGGAAGGATAGAATATTTGTAAATGAGAGTGAAGTGAAAGCATTAACAATAGAAAACATTGAGAAATATCCTGTTTCTTGGAAAACTAAAATTGCAACTGCATTGTTTTTTCAATCATTTGAATTTTCTTTATTGGAATTTTCCTCGCCTGAAGAAATGTGGAGTTATCTTGTAGAAAAGAATAAAGCAATGATTTTGATCCGTTGGATAAATGTTCAGCTGTCGGAAGTGGTACGAGACAAGAATGCTCGTTACAATTTTTTCAACAACGAAAGCTTTGTCCAGAAGCTGCTCAATGTTGACACTACTGGCTTCGACACTAAAGTCCTAGAAAGTTTGGATGAAATCTTTCGTCATTGGTCGATTACACACGAAATGATAGCCAGCGTGTCTGTAAGCAAATGTTACGCTTACACTAAAATGTGCATTTATGATACACTTTGTTCTTATGGTATTGTAAATGATGACGAACGAGATGATTTGTATCAAATCATTTCGAGACTTGCCCATACTCAGAATTTGAAATTAGTAGATGACATTTTCACGGAATCTTGTTCTACCATAACTAAACAACATTTTTATGTACAGTTGGCAAAGTATTGTGTGAAGAATAAACTGTATAAAGTATTGACTATGTGTGTGGAAGGCCACATTTTAGACACGGACTTGTCCGGTGTGGAGCAGGAAGCAAAGGATTGTATAGAACTTTGGCTGCTATTTAAAAGCATTGAACAAACTTCCGATCGACAAAGTCACGTCCTTCCCGTATACAAGACATGCGAGCAGATAGCCAAAGATAATATTCATGATTACATTACAGCCAATCCTCACCTAGTCCTAGGAATGATTTTGTTGGAGGATTCTACAAAATTGTTTGATATATTTTCCAAAGAGGACTATTTACACTTTACAGATTTTGTTTTGCCAAATAAAATATATAAAGACAAACTTCCTCATTTGCACAGCGTTTACAAAAAATACTCAGATTTGAATCAAATGTATGATTCAAAAGATGTGAATGTGTACCAGCTACTGTCCGGATACAGAGGATTGGACGTTTCAAAAATATTTGAATTCCAATTGATTAACCAGACCACAAACAATCTCTTTGCTGATAAACCTGACAGGCGAAGCCTCGGTAGTCTGCTGTCCAATGATGTAGACGTCAAAGCAGCGTGTATAAAAGCCTTATCTCAAAAAGGAACAGAAATGCCAGACTTTGCAAATGAAAAGCTAATGAAAAGATTTGGCTACGTCGCTAAGTTGAATCACCTGTATTATTTAAAACAGTATCGGCCTTGTAACGCCAGTCAAGCCTTTGTGGCTCAGCAATACCAGACATACAACCGATTGCAAGATAAGAGCATCAAAAGCGCTTGTTGTGAAGCGCACGCTCTGGCTTTACAGAATTGGTCCGATCCGGCCCTTACAGCTTGTGCGGTTTCGTTCGTAGCAATGATCGGGTGTAATCCAACAAGATGCAGGGTCCACGTATCTGCTGCGAATATGATAAAGAATTACTTAGTAAGAAACGGAGTGTCCGAAGAGAAGGCCAATAAAACGGTCAACGAGTACATGACCAAACTCATTCAAAGTAACGACGATGTGGCCAAAGATATTTTGAAGCATTTAGAGGAGATAACACTTCACAGTTTGAAAGTGAAGCAGGAAAACGAGGGCAAGTTGGACATGTCGTTCGTGTTATACGAATCACAAACAATGGTGAAATTCGCTATGCTCCATAATTTACCACTTCCCGAAATGCAGCTCAGGGAGTTCATCAAAACAAATTCGTGGTTCAATTTCCTATTGTTCGGAGACGTGCTCCGATACCCTTTACAGCAGATGCTGCATTTATCACAAGAATTTGAAAAACGTTCGTATGCCGAACACTTAAAGCATATTATGCTGCACAAGAATACGGAAACAGATTGTTCCGATAAGGAATTAAAGTCTCCGACGAATGGTCAGAGGCGGCTATCTAGGTTGAATTCGGTCGAAATTAATATAAAACCGAGCGGCGGACTGGAAGGAACATTCAATGCGTATTTGGGCCGGGAGCTGTGGGAGGTGGCGGCCGCGTGCCACGGCCCGGAGGACCCTCCGGCTGCGCTGCTAAGGGCTGCTGATCTGTGTCGAGAGCCACTCCTCGTACTAATAGCCAGTTGCTACGAACCAAACGCCGTGGACGTTCTCTGGGCGCAATGGGTATTGTCTTCAATGGGACCCACGAAATGCACATCGAACGACATGCAACAGATAATTGATCAGCAGTGCTCATCTGCTGAACAATTCCAACGGGTGGCCGAACTGTGCTTGTACGAAGGATACATTACTACTCTGCACGAATCTATGACCATATTTATGCCGGACAGCCCACTTAAACTCCTCACCGGTTTTCTCTATCGCTGCATAAGAAAACATCATTTCGATTTGGAGTCTAGTAAGCTTTTAACGAGCTTTATTCTGCATTGTCAACGAAAATATAGCGTGGAGTCCAACAGGTTGTCGTGGCAAATGTCAAAAGAATTCCTCCAGCGCGTTGCGGTCTCCTTAATCAAGATAGCGATCAGCGAAAACTTTGACAGCGCCTACCATCAAAGAGAGTTCTTGAGATTGTTGGCTAAAGCGGAATTCGGAAAAGACTTTTTAGTGCCGTCGCCGAATTTCATCACTCTCTTCGAAATCCTTAAGATATCTATGGAGACGTCGTTCGTCATAAACATCTCGAGGATGTTCGAAGACGATTTTAAACAGCATCTTTGTGAGAGCATCGACGTGTACACTTCGAATCGTAATTATGACGTGGCACTTAAAATAGCGAAACTGTCGGACTTATCGATCAACAAAATATTGATCGCGGAATGGACAGATAAATATGAAGTGTTACTGCAAAAACATGATGGTATCGAGGAAAAAGATTTGACACTCTTTATAGCGGAATGCAGTGAAGCGTTTAAAAGGGCAGGCGTCACTTTCAAAGACGCAGTAGACTTCCTCCTGGACTACTCGGCGAAGATAAAAGATCCCGTTCAGAAATTTTATTCCCTAAAGATCATCATGAATTGGTTCGAAGAGAATTTAGAGTACGGTCGTTTGCGCGAAGAAATCGAACATTCAATGTGGAATGCGTACTTTAAAACCGAACCGAACAGCATATTCTTGAACAATTATGCGAACACGTTACACTTCATAGCGACCGGACAGAAAGATAGAAACGTCTCGAACAACGTTGGGAGCTCGAACTCAGAGAGACCCTTCTCGATGACGTTGAACGAGATCGAAGTCGAATCGGATGTCGGTAATATCGAGAAAACGGTCCTACTCGAGGAGCCCGAAGCGATTGACGGTTGGCGGAAGGTGATCTTCCAGCTTTTGGAGCTCAGACTCATCGTCGACGCATTCCGTTTGTCTACGCTGTTCAAAACGCAGCCGGAGTTCAGGTACCGGCCGCCGCCGTGCCCCGTCCAAATCCTGAGATCCAGCCTGAAGCTGGCCGAAGGAACGTGCTCGCCTTACGAGCTACCCCAAGAATTGAGATTAGTGATATCGTCTCCGGTTTTGCAAAACAAACTGTCAATTTCAGGCGTGTCCGACGCGAGTTTTGAAGAGCTGGTAGTCATACAAGAGAAACAAATGAATGCTCCAGACAGCTCGCACCTCGCGGCTCGCGAAGAGGCCGACCGGCTGTCCGCGTTGGACGCCCTTGCCGTGCGAAGCGGCTTGTCTCTAGCCAAACAGGTGGCCAGCTACTTCCGGATAGCTTTGCAAATCGGCTGGGACTATTCGTCGGTGTTGAAGTATCAGAATCGAGCCCTCGATTTTATAAATTTCGTGAGCGGCCGAGCGCGGCTGTCGTTGGCGAACCTCGTTTTTAGAACATTCAACATCCCCACTAAACAGGTAGCAGAATACCTTTGCCGGGAGATGGTAGCAGCGATCATATCGCCGCATCTGGTCAAGACGTCAACCTTCAGACAAAAGGAGCACTTTCAATACACACTATGGGGCTACGCGATCAACTCCGACATCGAGATGTTCCTAAACATGAGGCCGGACGCTTGTAGCCAAATAGGCAGGCTGATACTCGATCACCTAATGGCCTTCCAGAAGATATACAAAGCGACGACCGTATCGAGAGTTCCAGAGAACGCTCTAGACGATAGTTGTCTTGACGTCGAGACTTTGATAGATGAAGAATATCAGCACGTTGAGGGAGAGGAAGCGGGTTCGGTATTAACGGGCGAAGGTACCTTACTGTCTGCGGAAACTGAGTCCGTGTATTCCGTGTCGACGGTCTACAGCGCTGGTAACAAGCTGACCCGCGACTCCCGGAGGAATTTATTCGATGTTATAACAAGGAATAACGTGCACGTCCGATACGAGGTCAAATCGAACGTTAGGAAGATAACGAAGGGTGCCAAATTGTCATCGAAACAGGTGAACATAATAGCGATAGAGTTGCTGGTGATGGCGCACGAGTGCTTCTCTTGCGCGTGCGACACGGAGGGCGTGGCGGTGACGGTGCGGTCGGCGCAGGCTCTGACGTCACGGCTGCTGGCGGCCCGCTCGTGGCGCCTCATGGTGCGTCTGCTGACCGGCCTCGCGCGCTACACAGAGTGCGCTTATATATTCCAGGCGCTAAGAGACAATCACCAATTCGAATATCTTCTCGGTCAATTCGATTATATGTTAGGGCAGCAACCCGATAAAATAGCGGAGTTCAAACAAGGCCTGCTCGATTTCCTGAAGAACCATTGTCCGGGCGATACCGACACGTACATAATGGTCGCCCTACACTTCAACATGTACGCCGAGGCGGCCGGCGTCAAGAAGAAACAGGCATTGAACTTGATTGAGGATTTAGAAAAAATGGCTTTGGATGCCGCCAGGTTGGTATCGAAGAAGCCCTTCCAACCGCCGACCTGGTTGTTGATTCACGACAACACCTCGACGAGGCTGCTCCTCGAGACCGCGCTGAACCATTGCACGGACGCGGCGGAGCTGTACCTCCAGGGCGGATGTACTGGATTCGCTGGCGAAATGGCGGCTCTGGCGCAGCAGATCGCCCTACAAATATCCTTACTAAACGCTTCTCCTACACGACTTATATTGAATCGAACTACGGAAAAAACGTATAGACTTGTCAGCGAATATCTGAGTTTCATGGAGGGTTTAGTGCTGCTTTCGGGACGCAGCGGGGAGGCGTGGCGCGAACTCGCCTACAGACGCGCGCTCTGCAACGACCAGGCTTACCTCCGGGACATGGTCACCTACAGGCCCGACGTGGCGCACGACATGCTCAGCAGATATAAAACAGAGAGAAACAAGACTTCCGTATCGCAGGCAGCTATGACTGAACTCCGTAATCTGTGTAGATGA

Protein

MEGLNQNEKVIWSCWEEKSPRDVVREAAAKGTHLTLAIKYLMEKNSWNEESARDWFIAEVKVWTVQLLLRKQIFKVLHVLSKVKINPEEHLMSLAETSSAIEYRDFLVEQLEKISKDMLSENIPKWLEFKRHWNLLRYLEKSFQIDGTYKQNKVFGTGKDRIFVNESEVKALTIENIEKYPVSWKTKIATALFFQSFEFSLLEFSSPEEMWSYLVEKNKAMILIRWINVQLSEVVRDKNARYNFFNNESFVQKLLNVDTTGFDTKVLESLDEIFRHWSITHEMIASVSVSKCYAYTKMCIYDTLCSYGIVNDDERDDLYQIISRLAHTQNLKLVDDIFTESCSTITKQHFYVQLAKYCVKNKLYKVLTMCVEGHILDTDLSGVEQEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTCEQIAKDNIHDYITANPHLVLGMILLEDSTKLFDIFSKEDYLHFTDFVLPNKIYKDKLPHLHSVYKKYSDLNQMYDSKDVNVYQLLSGYRGLDVSKIFEFQLINQTTNNLFADKPDRRSLGSLLSNDVDVKAACIKALSQKGTEMPDFANEKLMKRFGYVAKLNHLYYLKQYRPCNASQAFVAQQYQTYNRLQDKSIKSACCEAHALALQNWSDPALTACAVSFVAMIGCNPTRCRVHVSAANMIKNYLVRNGVSEEKANKTVNEYMTKLIQSNDDVAKDILKHLEEITLHSLKVKQENEGKLDMSFVLYESQTMVKFAMLHNLPLPEMQLREFIKTNSWFNFLLFGDVLRYPLQQMLHLSQEFEKRSYAEHLKHIMLHKNTETDCSDKELKSPTNGQRRLSRLNSVEINIKPSGGLEGTFNAYLGRELWEVAAACHGPEDPPAALLRAADLCREPLLVLIASCYEPNAVDVLWAQWVLSSMGPTKCTSNDMQQIIDQQCSSAEQFQRVAELCLYEGYITTLHESMTIFMPDSPLKLLTGFLYRCIRKHHFDLESSKLLTSFILHCQRKYSVESNRLSWQMSKEFLQRVAVSLIKIAISENFDSAYHQREFLRLLAKAEFGKDFLVPSPNFITLFEILKISMETSFVINISRMFEDDFKQHLCESIDVYTSNRNYDVALKIAKLSDLSINKILIAEWTDKYEVLLQKHDGIEEKDLTLFIAECSEAFKRAGVTFKDAVDFLLDYSAKIKDPVQKFYSLKIIMNWFEENLEYGRLREEIEHSMWNAYFKTEPNSIFLNNYANTLHFIATGQKDRNVSNNVGSSNSERPFSMTLNEIEVESDVGNIEKTVLLEEPEAIDGWRKVIFQLLELRLIVDAFRLSTLFKTQPEFRYRPPPCPVQILRSSLKLAEGTCSPYELPQELRLVISSPVLQNKLSISGVSDASFEELVVIQEKQMNAPDSSHLAAREEADRLSALDALAVRSGLSLAKQVASYFRIALQIGWDYSSVLKYQNRALDFINFVSGRARLSLANLVFRTFNIPTKQVAEYLCREMVAAIISPHLVKTSTFRQKEHFQYTLWGYAINSDIEMFLNMRPDACSQIGRLILDHLMAFQKIYKATTVSRVPENALDDSCLDVETLIDEEYQHVEGEEAGSVLTGEGTLLSAETESVYSVSTVYSAGNKLTRDSRRNLFDVITRNNVHVRYEVKSNVRKITKGAKLSSKQVNIIAIELLVMAHECFSCACDTEGVAVTVRSAQALTSRLLAARSWRLMVRLLTGLARYTECAYIFQALRDNHQFEYLLGQFDYMLGQQPDKIAEFKQGLLDFLKNHCPGDTDTYIMVALHFNMYAEAAGVKKKQALNLIEDLEKMALDAARLVSKKPFQPPTWLLIHDNTSTRLLLETALNHCTDAAELYLQGGCTGFAGEMAALAQQIALQISLLNASPTRLILNRTTEKTYRLVSEYLSFMEGLVLLSGRSGEAWRELAYRRALCNDQAYLRDMVTYRPDVAHDMLSRYKTERNKTSVSQAAMTELRNLCR

Uniprot

H9JB85   A0A2A4JXY7   A0A2A4JWB2   A0A2H1WJU2   A0A3S2M1F6   A0A194QRJ7   + More
A0A194PE78   A0A212FNL0   A0A0L7LR72   K7J0D4   A0A232FK96   A0A088ALG6   A0A154NXC9   A0A3L8D7I6   A0A195D3D2   F4WL05   A0A158P0A4   A0A195FC42   A0A1Y1MD88   A0A195E183   U4UU84   N6TWM8   A0A195B660   A0A151WLV9  

Pubmed

19121390    26354079    22118469    26227816    20075255    28648823    + More
30249741    21719571    21347285    28004739    23537049   

EMBL

BABH01008750    BABH01008751    NWSH01000455    PCG76290.1    PCG76291.1    ODYU01009143    + More
SOQ53355.1    RSAL01000073    RVE48988.1    KQ461198    KPJ06161.1    KQ459606    KPI91567.1    AGBW02005235    OWR55328.1    JTDY01000279    KOB77940.1    NNAY01000081    OXU31161.1    KQ434778    KZC04326.1    QOIP01000012    RLU16032.1    KQ976948    KYN06879.1    GL888207    EGI64968.1    ADTU01004774    ADTU01004775    KQ981685    KYN37961.1    GEZM01034610    JAV83704.1    KQ979824    KYN18898.1    KB632370    ERL93715.1    APGK01058413    APGK01058414    APGK01058415    KB741288    ENN70707.1    KQ976587    KYM79745.1    KQ982944    KYQ48823.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000002358    UP000215335    UP000005203    UP000076502    UP000279307    UP000078542    UP000007755    UP000005205    UP000078541    UP000078492    UP000030742    UP000019118    UP000078540    UP000075809   

PRIDE

H9JB85   

Pfam

PF14649   Spatacsin_C        + More
PF02949   7tm_6

Interpro

IPR028103   Spatacsin        + More
IPR028107   Spatacsin_C_dom       
IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

H9JB85   A0A2A4JXY7   A0A2A4JWB2   A0A2H1WJU2   A0A3S2M1F6   A0A194QRJ7   + More
A0A194PE78   A0A212FNL0   A0A0L7LR72   K7J0D4   A0A232FK96   A0A088ALG6   A0A154NXC9   A0A3L8D7I6   A0A195D3D2   F4WL05   A0A158P0A4   A0A195FC42   A0A1Y1MD88   A0A195E183   U4UU84   N6TWM8   A0A195B660   A0A151WLV9  

KEGG

101742270    K19026 spatacsin | (RefSeq) spatacsin

GO

GO:0005549   GO:0004984   GO:0016021   GO:0007165  

PANTHER

PTHR13650   PTHR21137  

Length:

1950

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06567

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.00006

outside

1  -  1950

 

 

Pi

269.431426

Theta

183.051774

Tajima's D

1.508263

CLR

0.403143

CSRT

0.786510674466277

Interpretation

Uncertain