SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05623  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006779
Annotation
PREDICTED:_probable_protein_phosphatase_CG10417_isoform_X2_[Amyelois_transitella]
Location
Bomo_Chr10(+):6589129-6597360      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.541
 

Sequence

CDS
ATGGATATCCTCAAAGTATTAGCAGGTGAAATAAATCCACCAGGCTCCAGCGACAATGAGGAAGAATCTGATGATGAAAATGTAACCAACTTGTACCAAGAAGCACATCTACCTTTGCAGGAGGTGTTGGCTAAATATGAAAACAAATTAAGTTCACTTCATCGAAATAGACTTGGAGACACAGCTACGCCACTCTCGCCATGTCTACGTGCCAAGAAGAATGTTGATGAACAGGATGCCGCAGGTGCCTCCAGTGACTTAGGATTAGGATGCTCATCATTAGGTTCAAGTTCCGAACAGTCTAATCAAGGAGCTTCATCTAGCAAAAATGGACTTATTGCACAGGAAGATGTCAAGATGAACACAGAAGATGACACTGGGGGAGTCTCATCTACAAGTTCCAATGAAAAAGACAAAGAAACAAATGGAGAGGTATCAACAAGTGACCCAGATACCATTGCAAAAGATCCCATTGCTGTAGAACCTGAGAAAATAAACTCAGCGGCACCAGACAGTTCTGATGACAATTTTCACCAGCCTGAACAAAGTGAAAATATTAAAAGCTGTGATGTGGCTCCCAGGAATAGTTCTGATGTTTGCAATGGAGAAGTTTCGGATTCAAAAGAAGCTGAAGGGGAGGACAACAATATTTCATCATCTAATGGATCTGCCACGCCAGTCAAGTCTGGGAAAGCTAAAGATAAAACTTCGCCAGTATCAAGTTCTGAAAAAGAAGCCCCAGAAAGACCAAAGAAGGCCAAATTACGACGAGCAGCTGCTGCTGTATATGAATCATTGCTGCTAGAGGCTGAGGAAGATGATGAAAGTGATTCGAATGATGAGACTTTTGAAGGAGGTGAAGTTAATTCGTCTGATGAAGAAAATGTGAATGGCAATGAAGATTCTTCCAATGAAGATGGAGGTGAAGAGGAAGATGATGAGGAAGACTATGAAGGTGATTCTAGTGATGAAGAAGGTGAAGAAGATTTGAGCATGACTGAGGAACCTGGCAATGACAGTGGATGTACAGCAGTGGTGGCATTGCTAAGAGGTAATGAGTTATATGTAGCGAACGCAGGCGATTCGCGTTGTATTCTCTGCAGAGATGGCACTGCAATTGATATGTCAATTGATCACAAACCTGAAGACTTGCCAGAACTCGAACGTATAACTAAAGCAGGCGGAAAAGTTTCTAATGACGGTCGAATTAACGGCGGATTAAATCTTTCACGAGCTATTGGCGACCATTCGTACAAGCAAAATAAAGACCTTGGTGCTAAAGAGCAAATGATCACAGCACTACCTGACGTGAAGAAATTATTAATAGATCCAATCAAAGACCAGTTCATGGTTTTAGCTTGTGACGGAATTTGGAATTATATGTCTAGTCAAGATGTTTGCAATTTCATTTTGCCGCGATTGGCAGAAGGCAGGGACAAACTGTCGCAAATATGTGAAGAGATGTTTGATCACTGTTTAGCACCAAGCACAATGGGAGATGGCACGGGCTGTGATAATATGACAGCTATTATAGTACGATTTAAAGATGGAGCCATTGCTGAAATTGGACAGCATAATAATACCATTGTTTCAAAAAAACGCACAGCTGAAGATGAACCTAGTGAAGAAAACAAACAGGAACCTAAAAGGCAAAAAACCGATGATTCTCTTTCAAGTTCAGTAGTGACTTCAAGTGTTTAA
Protein
MDILKVLAGEINPPGSSDNEEESDDENVTNLYQEAHLPLQEVLAKYENKLSSLHRNRLGDTATPLSPCLRAKKNVDEQDAAGASSDLGLGCSSLGSSSEQSNQGASSSKNGLIAQEDVKMNTEDDTGGVSSTSSNEKDKETNGEVSTSDPDTIAKDPIAVEPEKINSAAPDSSDDNFHQPEQSENIKSCDVAPRNSSDVCNGEVSDSKEAEGEDNNISSSNGSATPVKSGKAKDKTSPVSSSEKEAPERPKKAKLRRAAAAVYESLLLEAEEDDESDSNDETFEGGEVNSSDEENVNGNEDSSNEDGGEEEDDEEDYEGDSSDEEGEEDLSMTEEPGNDSGCTAVVALLRGNELYVANAGDSRCILCRDGTAIDMSIDHKPEDLPELERITKAGGKVSNDGRINGGLNLSRAIGDHSYKQNKDLGAKEQMITALPDVKKLLIDPIKDQFMVLACDGIWNYMSSQDVCNFILPRLAEGRDKLSQICEEMFDHCLAPSTMGDGTGCDNMTAIIVRFKDGAIAEIGQHNNTIVSKKRTAEDEPSEENKQEPKRQKTDDSLSSSVVTSSV

Summary

Cofactor
Mg(2+)
Similarity
Belongs to the PP2C family.
Uniprot
H9JB84   A0A2A4JXR6   A0A2H1WK25   A0A2A4JWY8   A0A1E1WC70   A0A2A4JXD3   + More
A0A194PFU3   A0A3S2NJ98   A0A2A4JWA0   A0A194QKS4   A0A212FNR1   S4PXI4   A0A0L7KYB6  
Pubmed
19121390    26354079    22118469    23622113    26227816   
EMBL
BABH01008750    NWSH01000455    PCG76293.1    ODYU01009143    SOQ53357.1    PCG76296.1    + More
GDQN01006495    JAT84559.1    PCG76294.1    KQ459606    KPI91569.1    RSAL01000073    RVE48992.1    PCG76295.1    KQ461198    KPJ06163.1    AGBW02005235    OWR55330.1    GAIX01004983    JAA87577.1    JTDY01004511    KOB68061.1   
Proteomes
UP000005204    UP000218220    UP000053268    UP000283053    UP000053240    UP000007151    + More
UP000037510   
PRIDE
H9JB84   
Pfam
PF00481   PP2C
Interpro
IPR000222   PP2C_BS        + More
IPR001932   PPM-type_phosphatase_dom       
IPR015655   PP2C       
IPR036457   PPM-type_dom_sf       
SUPFAM
SSF81606   SSF81606       
Gene 3D
3.60.40.10    
CDD
cd00143  PP2Cc
ProteinModelPortal
H9JB84   A0A2A4JXR6   A0A2H1WK25   A0A2A4JWY8   A0A1E1WC70   A0A2A4JXD3   + More
A0A194PFU3   A0A3S2NJ98   A0A2A4JWA0   A0A194QKS4   A0A212FNR1   S4PXI4   A0A0L7KYB6  
PDB
2I0O     E-value=1.11222e-70,     Score=679

Ontologies

KEGG
101741975    K17499 protein phosphatase 1G [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 11
GO
GO:0046872   GO:0004722   GO:0004721   GO:0003824   GO:0022857   GO:0006364   GO:0008757   GO:0006355   GO:0035076   GO:0043401   GO:0008270   GO:0003700   GO:0043565  
PANTHER
PTHR13832  

Topology

Length:
566
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00069
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00033
outside
1  -  566
 
 

Population Genetic Test Statistics

Pi
145.487658
Theta
159.805364
Tajima's D
0.323882
CLR
11.344906
CSRT
0.465176741162942
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 GNEIYVANAGDSR 100.00 9e-06
28467696 FKAPQPPEPWDGIR 100.00 9e-06
26280517 TADFNPNIAIYDMIMK 100.00 0.007
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