Gene

KWMTBOMO05617

Pre Gene Modal

BGIBMGA006776

Annotation

PREDICTED:_heparan_sulfate_glucosamine_3-O-sulfotransferase_5_[Amyelois_transitella]

Location

Bomo_Chr10(+):6473655-6488100      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.386 Nuclear   Reliability : 2.045

CDS

ATGAGTCAGTTGCCGAATAAGCACCATCGCCCTGAGGCGACTTACAGAAGTTGTTCTCAGTCCTTGCCTCTTGATATCCTATGGTTGCCGCGGTCGTCGTTCCGGCCGGCGGAGGGCGAGCTGGCGGACTGCGTTCTGGTGGTGGGCGTGTCGCGGCCCAAGCTAGCCGCGGCGCTGCTCTCCGTCACGCTACTGTCGCTCTTTCTCACCTTCCATGTTCTCTATGACAGCGCACTCTATAGCATACAGGCGGCCAGCATGGCGTCGGCTGCTAGCGAGAATCGCAAGATGTTGCTTAGCCAAGAGAGTGACACGCGTACCATCAGTCACCCCATGGCGTTACGGAAGAGACTTAGGCCTCCTAAGCAGCCTAGACCTGCTCGAAGACTTCCACAGGCTTTAATCATCGGCGTCCGGAAATGTGGCACTCGAGCTCTCCTGGAAATGCTGTACCTACATCCGATGGTCCAAAAGGCTTCCGGAGAAGTTCATTTCTTCGACAGAGATGAGAACTACGCTTTGGGCCTGGAATGGTACAGAAGTAAAATGCCGTTGTCTTTCAAAGGACAAATCACCATTGAGAAGAGTCCTAGCTATTTTGTTACGCCAGAGGTAAGGGCAACCGAAAGGATACGTTAA

Protein

MSQLPNKHHRPEATYRSCSQSLPLDILWLPRSSFRPAEGELADCVLVVGVSRPKLAAALLSVTLLSLFLTFHVLYDSALYSIQAASMASAASENRKMLLSQESDTRTISHPMALRKRLRPPKQPRPARRLPQALIIGVRKCGTRALLEMLYLHPMVQKASGEVHFFDRDENYALGLEWYRSKMPLSFKGQITIEKSPSYFVTPEVRATERIR

Uniprot

A0A2A4J1S8   A0A194QKV9   A0A212ESY3   A0A2H1WJ11   A0A194PFU8   A0A0L7KUX9   + More
W5JLS3   A0A182Q703   A0A1Y1LXL8   A0A3L8E313   A0A2M4CWJ5   A0A087ZR12   A0A2M4CXP6   A0A2M4CWD8   A0A158NEG2   B4KPK5   A0A0T6BDG8   B4MK07   D6WZI2   B4LJ39   B3MI27   A0A195EN96   A0A0M4EHK3   Q8MRE7   W8B7Y9   A0A195CPV1   A0A026VTJ2   A0A1A9XHB1   A0A182X5D9   A0A182RDU0   A0A0N0BK33   A0A182TSM6   A0A182M0T7   A0A0L7QLD5   A0A182V7U8   A0A182KNW1   A0A154P5P7   A0A182P7P8   A0A182IYR1   A0A2M4AXB5   A0A195FL99   E9ID31   A0A182GA57   A0A182YKV0   A0A310SNV9   E2B9K3   A0A182NK17   F4WVJ3   U4U7K9   E1ZZA7   A0A067QYP7   K7IRQ7   A0A084WL20   A0A182FH45   A0A2J7QTU5   A0A1J1JA79   A0A1J1J697   A0A2P8ZAI9   A0A1B0D339  

Pubmed

26354079    22118469    26227816    20920257    23761445    28004739    + More
30249741    21347285    17994087    18362917    19820115    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    24508170    20966253    21282665    26483478    25244985    20798317    21719571    23537049    24845553    20075255    24438588    29403074   

EMBL

NWSH01003555    PCG66117.1    KQ461198    KPJ06167.1    AGBW02012691    OWR44605.1    + More
ODYU01008972    SOQ53017.1    KQ459606    KPI91574.1    JTDY01005378    KOB67062.1    ADMH02000773    ETN65081.1    AXCN02000496    GEZM01045939    JAV77608.1    QOIP01000001    RLU27036.1    GGFL01005461    MBW69639.1    GGFL01005460    MBW69638.1    GGFL01005462    MBW69640.1    ADTU01013289    CH933808    EDW09115.2    LJIG01001554    KRT85386.1    CH963846    EDW72446.1    KQ971372    EFA09701.2    CH940648    EDW61475.2    CH902619    EDV38037.1    KPU77227.1    KPU77228.1    KPU77229.1    KPU77230.1    KQ978625    KYN29663.1    CP012524    ALC42072.1    AE013599    AY121626    AAF57644.2    AAM51953.1    AHN56384.1    GAMC01011828    JAB94727.1    KQ977444    KYN02660.1    KK107965    EZA47062.1    KQ435709    KOX79992.1    AXCM01003374    KQ414924    KOC59420.1    KQ434822    KZC07197.1    GGFK01012099    MBW45420.1    KQ981490    KYN41121.1    GL762454    EFZ21402.1    JXUM01008586    JXUM01008587    JXUM01008588    JXUM01008589    JXUM01008590    JXUM01008591    JXUM01008592    JXUM01008593    JXUM01008594    KQ560264    KXJ83477.1    KQ759804    OAD62792.1    GL446556    EFN87636.1    GL888387    EGI61814.1    KB632191    ERL89869.1    GL435311    EFN73522.1    KK852824    KDR15472.1    ATLV01024170    KE525350    KFB50914.1    NEVH01011193    PNF31995.1    CVRI01000074    CRL07929.1    CRL07931.1    PYGN01000124    PSN53510.1    AJVK01023234    AJVK01023235   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000037510    UP000000673    + More
UP000075886    UP000279307    UP000005203    UP000005205    UP000009192    UP000007798    UP000007266    UP000008792    UP000007801    UP000078492    UP000092553    UP000000803    UP000078542    UP000053097    UP000092443    UP000076407    UP000075900    UP000053105    UP000075902    UP000075883    UP000053825    UP000075903    UP000075882    UP000076502    UP000075885    UP000075880    UP000078541    UP000069940    UP000249989    UP000076408    UP000008237    UP000075884    UP000007755    UP000030742    UP000000311    UP000027135    UP000002358    UP000030765    UP000069272    UP000235965    UP000183832    UP000245037    UP000092462   

PRIDE

Q8MRE7   

Pfam

PF00685   Sulfotransfer_1

Interpro

IPR027417   P-loop_NTPase        + More
IPR000863   Sulfotransferase_dom       
IPR037359   NST/OST       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2A4J1S8   A0A194QKV9   A0A212ESY3   A0A2H1WJ11   A0A194PFU8   A0A0L7KUX9   + More
W5JLS3   A0A182Q703   A0A1Y1LXL8   A0A3L8E313   A0A2M4CWJ5   A0A087ZR12   A0A2M4CXP6   A0A2M4CWD8   A0A158NEG2   B4KPK5   A0A0T6BDG8   B4MK07   D6WZI2   B4LJ39   B3MI27   A0A195EN96   A0A0M4EHK3   Q8MRE7   W8B7Y9   A0A195CPV1   A0A026VTJ2   A0A1A9XHB1   A0A182X5D9   A0A182RDU0   A0A0N0BK33   A0A182TSM6   A0A182M0T7   A0A0L7QLD5   A0A182V7U8   A0A182KNW1   A0A154P5P7   A0A182P7P8   A0A182IYR1   A0A2M4AXB5   A0A195FL99   E9ID31   A0A182GA57   A0A182YKV0   A0A310SNV9   E2B9K3   A0A182NK17   F4WVJ3   U4U7K9   E1ZZA7   A0A067QYP7   K7IRQ7   A0A084WL20   A0A182FH45   A0A2J7QTU5   A0A1J1JA79   A0A1J1J697   A0A2P8ZAI9   A0A1B0D339  

PDB

3BD9     E-value=3.89744e-25,     Score=281

KEGG

101740692    K08104 [heparan sulfate]-glucosamine 3-sulfotransferase 5 [EC:2.8.2.23] | (RefSeq) heparan sulfate g

GO

GO:0008146   GO:0016021   GO:0015012   GO:0008467   GO:0034483   GO:0005515   GO:0006364   GO:0008757   GO:0006355   GO:0035076   GO:0043401   GO:0008270   GO:0003700   GO:0043565  

PANTHER

PTHR10605  

Length:

212

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

17.1299

Exp number, first 60 AAs:

4.10384

Total prob of N-in:

0.46810

outside

1  -  212

 

 

Pi

274.101455

Theta

166.932633

Tajima's D

2.362059

CLR

0.370951

CSRT

0.931903404829759

Interpretation

Uncertain