SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05616
Pre Gene Modal
BGIBMGA006775
Annotation
lebocin-3_precursor_[Bombyx_mori]
Full name
Lebocin-3       + More
Lebocin-4      
Lebocin-1/2      
Location in the cell
Extracellular   Reliability : 3.614
 

Sequence

CDS
ATGTACAAGTTTTTAGTATTCAGTTCAGTTCTGGTGCTGTTCTTTGCTCAGGCTTCGTGCCAGAGGTTCATCCAGCCGACCTACAGGCCACCGCCAACACAGCGCCCGATAACACGTACAGTGCGACAAGCTGGCCAGGAACCGCTATGGCTGTATCAAGGTGACAATGTTCCTCGTGCGCCAAGTACTGCAGACCATCCGATTCTTCCTTCGAAAATCGACGACGTGCAGCTCGATCCAAACCGAAGGTATGTTCGCAGTGTCACCAATCCAGAAAATAACGAGGCGTCCATTGAACATTCACATCATACAGTTGATACTGGACTTGACCAGCCGATCGAGAGCCACCGTAACACAAGGGACCTGCGGTTTTTGTACCCTCGAGGGAAACTGCCTGTTCCAACGCTTCCTCCGTTTAACCCCAAGCCAATATATATTGATATGGGAAACCGTTACCGACGACATGCGTCGGAGGATCAAGAAGAATTGCGGCATTATGATGAGCACTTTCTGATTCCGAGGGACATTTTCCAAGAATAG
Protein
MYKFLVFSSVLVLFFAQASCQRFIQPTYRPPPTQRPITRTVRQAGQEPLWLYQGDNVPRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFLIPRDIFQE

Summary

Similarity
Belongs to the lebocin family.
Keywords
Antibiotic   Antimicrobial   Complete proteome   Direct protein sequencing   Glycoprotein   Immunity   Innate immunity   Reference proteome   Secreted   Signal  
Feature
peptide  Lebocin-3

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 20,         Likelihood:  0.989090
 
 
Length:
179
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.44828
Exp number, first 60 AAs:
1.44805
Total prob of N-in:
0.08440
outside
1  -  179
 
 

Population Genetic Test Statistics

Pi
203.521627
Theta
144.961708
Tajima's D
1.272798
CLR
0
CSRT
0.725063746812659
Interpretation
Uncertain
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