Gene

KWMTBOMO05615

Pre Gene Modal

BGIBMGA006567

Annotation

PREDICTED:_NCK-interacting_protein_with_SH3_domain_[Bombyx_mori]

Location

Bomo_Chr10(-):6386641-6396794      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.228

CDS

ATGGGAGATACACAAAACGATGATTTCGAAATGCTCAAAGCCTTATTTGATTTTGAAGCCACATTGGCAAAAACGTTAAGTTTCTCGGAAGGTGAATATTTTCATTTGCAACAGAGCAACACTAAACAACGAAACTGGTGGCATGTTGTTAATAGGAAAGGTCAGGTCGGCTTTGTGCCCTCTAATTATGTAGCTACAGTCAAGGTAGAGGCGGAGTACCTGTTGGCTTTTTTGAGCGATTGTATTAAAAATTTAAACGAAAGCAGCTCGCACTCTCAAAAGCAGGACCTATTGATTAAAATTATTGAAAGAAAAAAACAAGTGCAGATGTTTGTGAAGCCGCATTCTAAAAAACAGCAAGCACCAAAGCCTCCGCCAAGGCTAGATGACAGCACTCCTCCAAATGGAGTGTCGCCTTCATTTGATCTTAGGCCTGTTGTATCTCAACAGCAGATCAGCGAAGAGAGGGATTCACCACCAAAATCATCAAGCACCAATGATGAAAATGATGATACAAGGAGTAAATGTGATCTCAAAAACATCAAGCAGCACTCTTTTGACACTGATAACCAGGATGATAGCCAAGATAGCAGTGAGAGTATTAAGCCAAATGCAATATATGAAATTGTTCAAGCTGTGCGGAAAGAGACTCAGCTTAGTCATGAAATGTCAAAGGTTGCTGTTGAAACTGTTCTCATTTCGCTAAGAGAGTTCCTACCTGGTGGTGCTGCAAGATCCATTATAGATGCATTACTTCGTGAGGCCAATAGTAATATAACCTGTCCGAAGAATGCTATTGATGCTGCTCCTGATGCATTGAGGATGATGACTGCATTGAATGCACTTTCCAAAGCAGCTAATGATGCTCAACAAAGAGGCTGGGCATTGCATGATGACTCACATGACATACAAACACAATTGCTTGAACTGATCTCCGTTATGTCAAATGCTGATGTCAACATATCCCAACATGTGTTGAGCAGTCATCGATATGTTTATGTGACAACTTTGGTACAGTATTATCAGATGGAAACTCGGTGGCCCCTACGTCAGCTACTGTTACAGGCATTTGGTATAATGTGCGGCCTAGAGCGTACAGCCCTAGCAACATTGGCGCTGTCATCGTTACCGGCGGAGATTGCTCGAGACATGCGCGACAACCCTAGGGCCGTCAGCCGTCTCTCTCACTCCGCTCTGCTACTCTCCATGGTTCTATCTATGGGAGACAAACTTCCGGTCACACATTTCGAGCAGCTCGGCCTTGAATTTGCACAATTTTTGCTGGAGTTGCTTGAAGATCCACCGGAAACCGATGTCGATGAACAGATACCTGATTTGTTTTCAACTCTCCTTTTGGCCTACAACTTGCAGTTTGAGAACCCATTCGACAACATATTGTTGAATGCATTGGAAACAAGGGACATGGCCAAAACATTCTGTGAGAAAGTGCTCTTGTTACTCAATCGTGAAGAAGACCCGGTGCGTATTTTTGAGCACGAGCCGGCACCTACTCATTCTGTTCTCAAACTGGTGATTGACTTGTTTAGTCGTAAAAAAACCGCAGACCACTTTTATACTAATGACGTAAAGGTCGCCATAGATATAGTTGTGAGGCAACTGGCCGATCTCTCGCCTGGTGATACGCGTCGCCAGCAATACTTGAAGATTCTCCAAGGTGTTATTCGGAACACTGACTACGGTTCTCACCTGCACCGCAGAGACGACCTGCTGCGTTGTTTCGCTCGCATATTCTGCGAAGAAGGTGAATGCAGTCGAGAGGATCAAGCTCTGGTCAGGGCTATTTCCAACGAGTTCCCGCAGTTTTTCAAGGCCTAA

Protein

MGDTQNDDFEMLKALFDFEATLAKTLSFSEGEYFHLQQSNTKQRNWWHVVNRKGQVGFVPSNYVATVKVEAEYLLAFLSDCIKNLNESSSHSQKQDLLIKIIERKKQVQMFVKPHSKKQQAPKPPPRLDDSTPPNGVSPSFDLRPVVSQQQISEERDSPPKSSSTNDENDDTRSKCDLKNIKQHSFDTDNQDDSQDSSESIKPNAIYEIVQAVRKETQLSHEMSKVAVETVLISLREFLPGGAARSIIDALLREANSNITCPKNAIDAAPDALRMMTALNALSKAANDAQQRGWALHDDSHDIQTQLLELISVMSNADVNISQHVLSSHRYVYVTTLVQYYQMETRWPLRQLLLQAFGIMCGLERTALATLALSSLPAEIARDMRDNPRAVSRLSHSALLLSMVLSMGDKLPVTHFEQLGLEFAQFLLELLEDPPETDVDEQIPDLFSTLLLAYNLQFENPFDNILLNALETRDMAKTFCEKVLLLLNREEDPVRIFEHEPAPTHSVLKLVIDLFSRKKTADHFYTNDVKVAIDIVVRQLADLSPGDTRRQQYLKILQGVIRNTDYGSHLHRRDDLLRCFARIFCEEGECSREDQALVRAISNEFPQFFKA

Uniprot

H9JAM2   A0A212EQ26   A0A2A4JRL2   A0A2H1WJP2   A0A2A4JQU5   A0A194PEY0   + More
A0A0L7QUN2   A0A151INP6   A0A088A153   A0A026WB32   A0A3L8DIX7   A0A154PQU3   A0A195EF72   A0A2A3ELU9   V9IE88   F4WQV3   A0A0C9QM51   A0A1Y1N794   A0A0N0BGJ6   K7J1S8   D6WZP9   A0A195ESN7   A0A2J7PW28   A0A232F781   U4TYC3   E9J6X9   A0A1B6GJ96   A0A1B6DI14   A0A1B6CUC5   A0A069DVV7   A0A023EZU3   A0A2M4BFZ7   A0A2M4BG63   A0A182FJ04   T1J6B7  

Pubmed

19121390    22118469    26354079    24508170    30249741    21719571    + More
28004739    20075255    18362917    19820115    28648823    23537049    21282665    26334808    25474469   

EMBL

BABH01008727    BABH01008728    AGBW02013342    OWR43561.1    NWSH01000751    PCG74406.1    + More
ODYU01009072    SOQ53227.1    PCG74407.1    KQ459606    KPI91578.1    KQ414735    KOC62181.1    KQ976919    KYN07086.1    KK107347    EZA52239.1    QOIP01000007    RLU20367.1    KQ435050    KZC14233.1    KQ978983    KYN26806.1    KZ288215    PBC32680.1    JR041288    AEY59400.1    GL888275    EGI63466.1    GBYB01004609    JAG74376.1    GEZM01011906    JAV93338.1    KQ435776    KOX74888.1    KQ971372    EFA09668.1    KQ981993    KYN30927.1    NEVH01020940    PNF20520.1    NNAY01000817    OXU26350.1    KB631843    ERL86629.1    GL768395    EFZ11425.1    GECZ01007406    JAS62363.1    GEDC01011984    GEDC01002060    JAS25314.1    JAS35238.1    GEDC01020327    JAS16971.1    GBGD01000933    JAC87956.1    GBBI01004401    JAC14311.1    GGFJ01002821    MBW51962.1    GGFJ01002822    MBW51963.1    JH431874   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053825    UP000078542    + More
UP000005203    UP000053097    UP000279307    UP000076502    UP000078492    UP000242457    UP000007755    UP000053105    UP000002358    UP000007266    UP000078541    UP000235965    UP000215335    UP000030742    UP000069272   

PRIDE

H9JAM2   

Pfam

PF09431   DUF2013        + More
PF07653   SH3_2
PF14604   SH3_9
PF00018   SH3_1
PF04494   TFIID_NTD2
PF00400   WD40

Interpro

IPR001452   SH3_domain        + More
IPR016024   ARM-type_fold       
IPR018556   DUF2013       
IPR036028   SH3-like_dom_sf       
IPR035514   SPIN90_SH3       
IPR017986   WD40_repeat_dom       
IPR037264   TFIID_NTD2_sf       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR037783   Taf5       
IPR019775   WD40_repeat_CS       
IPR007582   TFIID_NTD2       
IPR036322   WD40_repeat_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       

SUPFAM

SSF48371   SSF48371        + More
SSF50044   SSF50044       
SSF50978   SSF50978       
SSF160897   SSF160897       

Gene 3D

1.25.40.500     2.130.10.10    

CDD

cd11849  SH3_SPIN90
cd08044  TAF5_NTD2

ProteinModelPortal

H9JAM2   A0A212EQ26   A0A2A4JRL2   A0A2H1WJP2   A0A2A4JQU5   A0A194PEY0   + More
A0A0L7QUN2   A0A151INP6   A0A088A153   A0A026WB32   A0A3L8DIX7   A0A154PQU3   A0A195EF72   A0A2A3ELU9   V9IE88   F4WQV3   A0A0C9QM51   A0A1Y1N794   A0A0N0BGJ6   K7J1S8   D6WZP9   A0A195ESN7   A0A2J7PW28   A0A232F781   U4TYC3   E9J6X9   A0A1B6GJ96   A0A1B6DI14   A0A1B6CUC5   A0A069DVV7   A0A023EZU3   A0A2M4BFZ7   A0A2M4BG63   A0A182FJ04   T1J6B7  

PDB

6DEE     E-value=2.39096e-56,     Score=556

KEGG

101740557    no KO assigned | (RefSeq) NCK-interacting protein with SH3 domain

GO

GO:0005669   GO:0003743   GO:0005488   GO:0005515   GO:0006364   GO:0008757   GO:0006355   GO:0035076   GO:0043401   GO:0008270   GO:0003700   GO:0043565  

PANTHER

PTHR19879:SF4  

Length:

611

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04043

Exp number, first 60 AAs:

0.0015

Total prob of N-in:

0.00129

outside

1  -  611

 

 

Pi

385.543493

Theta

220.007737

Tajima's D

2.765917

CLR

0.325571

CSRT

0.96385180740963

Interpretation

Uncertain