Gene

KWMTBOMO05614  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006774

Annotation

PREDICTED:_cytochrome_b_reductase_1-like_isoform_X2_[Papilio_polytes]

Location

Bomo_Chr10(+):6361925-6376179      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.989

CDS

ATGGGTGGACGAGCTCACAGCGCAAATGCTGTTAAGAGGTTACCGGAGCACATAGACATCTACATAGTAAATGCCGCCACCCACCTTGAGATAAAAGTTCTAAGCCAACGCAGTCGGTCCTATGACTCGGACGACCACGAGCGAGGTGCCTGCGAGTGGTGCGAGTATGCCCTCGTGATCACTTTGGCGACGGTGCTGCTCATTGGCGTCTCCGCTCTGACCATCTTCTGGGTGTTCTATTACCGCGGGGGCTATGCCTGGGCCGACGACACCCCGGACAAGCAGTTCAACTTGCACCCGACTCTTATGGTGGCCGGTTTCGTTACATTCTGCGGTTTCTCCGTGCTCTTGTACCGCATCTGTCGATGCTTCCGGCGCATCTATGTCAAACTGCTGCACGCCATCTTCCACGCGTTAGCGTTCCCGTGCATCGTTATCGGCTTCCTGGCTGTCCTCGACTACCACAACAAGAAGGGCATCAACAACTTCTATTCGCTCCACAGCTGGATTGGCTTCGTCGCCATGGGACTGTTTGGATTACAGTACGCAGTCGGCTTCTTCAGCTTCCTCCTACTGTTGATTTGCAATAAAGGCACCGCTGGATTCCGCGCTTCCTTGGTACCGATCCACGCCGCCTTTGGAATCCTGACCTTCGTACTCGGTGTCGCTGCTTGTCTCACCGGACTCACTGAAAAGGCAATCTTTGCCCTCGGGAGCGAGCAGTACCCGCTTTTGGAACCTGAAGCGATCGTTATCAACGCTATCGGAATGACTGTGGTTGCTGTTGCCATCGTTGTGCTTTACACTGTACGCGGCACTGGCGGCTACAGGCTCCGCAAGGTCGCCCAGCACCCGAGTTAA

Protein

MGGRAHSANAVKRLPEHIDIYIVNAATHLEIKVLSQRSRSYDSDDHERGACEWCEYALVITLATVLLIGVSALTIFWVFYYRGGYAWADDTPDKQFNLHPTLMVAGFVTFCGFSVLLYRICRCFRRIYVKLLHAIFHALAFPCIVIGFLAVLDYHNKKGINNFYSLHSWIGFVAMGLFGLQYAVGFFSFLLLLICNKGTAGFRASLVPIHAAFGILTFVLGVAACLTGLTEKAIFALGSEQYPLLEPEAIVINAIGMTVVAVAIVVLYTVRGTGGYRLRKVAQHPS

Similarity

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.

Uniprot

H9JB79   A0A2A4JSG5   A0A194QKW4   A0A2H1WJH2   A0A212EPY8   I4DML1   + More
A0A2A4JQS4   A0A2A4JSM8   A0A2A4JS07   I4DL20   S4PVU3   A0A194PFV3   A0A1Y1MNC5   A0A146KMU1   A0A1Y1MND0   A0A069DXX6   A0A023F983   R4G5W5   A0A1W4XT88   A0A1W4XSB1   A0A139WBJ9   D6WZ69   A0A1W4XTD0   A0A1B6DSN9   E0VVT2   A0A1B0C871   A0A1B6CL74   A0A1L8E0H6   A0A1L8DZV3   N6UP03   U4UPS6   A0A182J656   A0A182P8T7   A0A2M4CS21   A0A2M4BX83   A0A2M4BXI1   B4J8F5   A0A0Q9VYR3   B4MFP3   A0A1B6F544   A0A182MFN3   A0A0Q9W5V8   A0A1B6FLN8   A0A0Q9X6Z3   A0A182SQE4   A0A182YC30   A7UTA7   A0A182HNX1   A0A182RKW5   A0A182WK16   A0A1Y9GI20   A0A182XEU4   Q7Q9I3   A0A1B0GBY5   Q16QH9   A0A1S4FSU8   A0A2M3Z8X0   A0A182FCX1   A0A023ELD3   A0A034VHS0   W5JU50   A0A0A1XR97   B4KRS6   A0A0K8W9T2   A0A034VGS4   A0A0Q9XIG3   A0A0A1WK18   A0A0Q9X7T9   A0A0K8U9R1   A0A034VID8   A0A182Q9T3   A0A1S3DCB8   A0A1D6ZM26   A0A0M4EEC4   A0A182U4V9   T1PHK3   A0A1I8PNT6   A0A1I8PNP7   A0A1I8M9F2   A0A1A9ZYR6   A0A1B0BY62   A0A1I8M9F1   A0A1I8PNT9   A0A1W4VQZ1   T1PKG5   A0A0N8P0C5   A0A3B0JM45   A0A0P8XQ64   N6W627   A0A1I8M9E9   A0A3B0JMS7   A0A1W4VD81   C0PTW4   A0A0R3NV20   B3MCU8  

Pubmed

19121390    26354079    22118469    22651552    23622113    28004739    + More
26823975    26334808    25474469    18362917    19820115    20566863    23537049    17994087    25244985    12364791    14747013    17210077    17510324    24945155    25348373    20920257    23761445    25830018    18057021    25315136    15632085   

EMBL

BABH01008727    NWSH01000751    PCG74403.1    KQ461198    KPJ06172.1    ODYU01009072    + More
SOQ53225.1    AGBW02013342    OWR43562.1    AK402529    BAM19151.1    PCG74405.1    PCG74402.1    PCG74404.1    AK401988    BAM18610.1    GAIX01007938    JAA84622.1    KQ459606    KPI91579.1    GEZM01026197    JAV87161.1    GDHC01020871    JAP97757.1    GEZM01026196    JAV87162.1    GBGD01002670    JAC86219.1    GBBI01000650    JAC18062.1    GAHY01000165    JAA77345.1    KQ971372    KYB25307.1    EFA10387.2    GEDC01025328    GEDC01008601    JAS11970.1    JAS28697.1    DS235813    EEB17488.1    AJWK01000228    AJWK01000229    GEDC01023183    GEDC01013974    JAS14115.1    JAS23324.1    GFDF01002089    JAV11995.1    GFDF01002061    JAV12023.1    APGK01002698    APGK01002699    KB734918    ENN83480.1    KB632312    ERL92151.1    GGFL01003783    MBW67961.1    GGFJ01008400    MBW57541.1    GGFJ01008635    MBW57776.1    CH916367    EDW02314.1    CH940667    KRF77670.1    EDW57214.1    GECZ01024474    GECZ01015662    GECZ01009957    JAS45295.1    JAS54107.1    JAS59812.1    AXCM01011146    KRF77671.1    GECZ01018667    GECZ01014382    JAS51102.1    JAS55387.1    CH933808    KRG04070.1    AAAB01008900    EDO64114.1    APCN01002800    APCN01002801    APCN01002802    EAA09405.2    CCAG010005902    CH477747    EAT36661.1    GGFM01004194    MBW24945.1    GAPW01003572    GEHC01000229    JAC10026.1    JAV47416.1    GAKP01017642    JAC41310.1    ADMH02000362    ETN66823.1    GBXI01001189    JAD13103.1    EDW08346.1    GDHF01004482    JAI47832.1    GAKP01017645    JAC41307.1    KRG04068.1    KRG04071.1    GBXI01015554    JAC98737.1    KRG04069.1    GDHF01028996    GDHF01003706    JAI23318.1    JAI48608.1    GAKP01017647    GAKP01017644    JAC41308.1    AXCN02001019    KT722698    ANS71633.1    CP012524    ALC41501.1    KA648302    AFP62931.1    JXJN01022490    KA647945    KA649194    AFP63823.1    CH902619    KPU76740.1    OUUW01000001    SPP74619.1    KPU76739.1    CM000071    ENO01708.2    SPP74616.1    BT071809    ACN58572.1    KRT02627.1    EDV37350.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000192223    + More
UP000007266    UP000009046    UP000092461    UP000019118    UP000030742    UP000075880    UP000075885    UP000001070    UP000008792    UP000075883    UP000009192    UP000075901    UP000076408    UP000007062    UP000075840    UP000075900    UP000075920    UP000076407    UP000092444    UP000008820    UP000069272    UP000000673    UP000075886    UP000079169    UP000092553    UP000075902    UP000095300    UP000095301    UP000092445    UP000092460    UP000192221    UP000007801    UP000268350    UP000001819   

PRIDE

H9JB79    C0PTW4   

Pfam

PF03188   Cytochrom_B561        + More
PF01189   Methyltr_RsmB-F
PF17125   Methyltr_RsmF_N

Interpro

IPR006593   Cyt_b561/ferric_Rdtase_TM        + More
IPR023273   RCMT_NOP2       
IPR023267   RCMT       
IPR001678   MeTrfase_RsmB/NOP2       
IPR011023   Nop2p       
IPR031341   Methyltr_RsmF_N       
IPR018314   Fmu/NOL1/Nop2p_CS       
IPR029063   SAM-dependent_MTases       
IPR036259   MFS_trans_sf       

SUPFAM

SSF53335   SSF53335        + More
SSF103473   SSF103473       

ProteinModelPortal

H9JB79   A0A2A4JSG5   A0A194QKW4   A0A2H1WJH2   A0A212EPY8   I4DML1   + More
A0A2A4JQS4   A0A2A4JSM8   A0A2A4JS07   I4DL20   S4PVU3   A0A194PFV3   A0A1Y1MNC5   A0A146KMU1   A0A1Y1MND0   A0A069DXX6   A0A023F983   R4G5W5   A0A1W4XT88   A0A1W4XSB1   A0A139WBJ9   D6WZ69   A0A1W4XTD0   A0A1B6DSN9   E0VVT2   A0A1B0C871   A0A1B6CL74   A0A1L8E0H6   A0A1L8DZV3   N6UP03   U4UPS6   A0A182J656   A0A182P8T7   A0A2M4CS21   A0A2M4BX83   A0A2M4BXI1   B4J8F5   A0A0Q9VYR3   B4MFP3   A0A1B6F544   A0A182MFN3   A0A0Q9W5V8   A0A1B6FLN8   A0A0Q9X6Z3   A0A182SQE4   A0A182YC30   A7UTA7   A0A182HNX1   A0A182RKW5   A0A182WK16   A0A1Y9GI20   A0A182XEU4   Q7Q9I3   A0A1B0GBY5   Q16QH9   A0A1S4FSU8   A0A2M3Z8X0   A0A182FCX1   A0A023ELD3   A0A034VHS0   W5JU50   A0A0A1XR97   B4KRS6   A0A0K8W9T2   A0A034VGS4   A0A0Q9XIG3   A0A0A1WK18   A0A0Q9X7T9   A0A0K8U9R1   A0A034VID8   A0A182Q9T3   A0A1S3DCB8   A0A1D6ZM26   A0A0M4EEC4   A0A182U4V9   T1PHK3   A0A1I8PNT6   A0A1I8PNP7   A0A1I8M9F2   A0A1A9ZYR6   A0A1B0BY62   A0A1I8M9F1   A0A1I8PNT9   A0A1W4VQZ1   T1PKG5   A0A0N8P0C5   A0A3B0JM45   A0A0P8XQ64   N6W627   A0A1I8M9E9   A0A3B0JMS7   A0A1W4VD81   C0PTW4   A0A0R3NV20   B3MCU8  

PDB

5ZLG     E-value=5.13065e-29,     Score=316

KEGG

101741447    K08360 cytochrome b-561 [EC:7.2.1.3] | (RefSeq) cytochrome b561

GO

GO:0016021   GO:0055114   GO:0016491   GO:0007613   GO:0046928   GO:0007626   GO:0048167   GO:0003723   GO:0008757   GO:0006364  

Length:

286

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

135.47367

Exp number, first 60 AAs:

3.41267

Total prob of N-in:

0.99925

inside

1  -  57

TMhelix

58  -  80

outside

81  -  94

TMhelix

95  -  117

inside

118  -  129

TMhelix

130  -  152

outside

153  -  171

TMhelix

172  -  194

inside

195  -  205

TMhelix

206  -  228

outside

229  -  247

TMhelix

248  -  270

inside

271  -  286

 

 

Pi

237.899943

Theta

200.985673

Tajima's D

1.096568

CLR

0.333756

CSRT

0.68301584920754

Interpretation

Uncertain