Pre Gene Modal
BGIBMGA006772
Annotation
PREDICTED:_25S_rRNA_(cytosine-C(5))-methyltransferase_nop2_[Amyelois_transitella]
Location in the cell
Nuclear Reliability : 4.763
Sequence
CDS
ATGGGTAGAAAAGCGAAATTTGATGAGACGAAAAAAGTGAAAAAAGGTCCTGGAAGGAAAGCAAAAAAACAGCCCGATCCAGTATTTAGAAAGGAGCTATTAGAGACTGAAGATCAGGTGAAAAAACTGACTCACAGGCAAAAGCAAAGGGCCGCAAAACGTGCCAAAAAAAAGGCTGAAATAGTTGAAAAAAGAAAAGCTATAAAACAAGGCAAGAAAAATGAAGCTAAAGAAATTGAGACAAATGACGAAGACATTAAAAAACCAGTTGTAAAAGGTTACTCTGATGACAACAAAGAATGGCTGAAACCAAAACAGAAGGTTAAACAACAGAAAAAACAAAAAGATTCAGACAGTGACATTTGTGATCAAGATGAGGGTTCAGAGATGGAGCAGGACTCTGAAGCTGAAAGTGAGCATGAAGAAGAAACAAAAACTGTCAGTGAAAAGTATAAGGTGGGAACTCTTGATGATCTATTCAAAGATTCTGATGAAGAGGAGGCGGATCCAAGTTCAGAAGAAGAAGGATCTGTAAATAGTGGCAATGCAGGATATAATTCTGATTCAAGTGAAGAAGAATCTGATGAGGATGGTGATGATGAGGATATGCTGCCTATTGAAAAAGCAAATGTGAAGCTGAAGAAGAAACAAAAGGAGGAAAAGAAATTGGCAGATGAGGAAATGCAATTGAATATATCAAAACAAGATGTTTTTGCTTTCCCTTCAGAAGAAGAGCTACAGAATCCTACCAGCCTTCAAGATGTACAACAAAGGATCAAAGATGTAGTCTCTGTTTTGACAGAATTTAATAGATTAAAAGAGGAAGGGCGTTCAAGATGTGAATACACAGACTTATTACTTAAAGATCTTTGTACCTATTATAGTTATAATGAGTTTTTGATGGAAGTTCTTATGCAAATATTTCCTGTACAAGAATTAGTGGAGTTTTTGGAAGCAAGTGAGATTGCTAGACCTGTGACGATAAGAACTAACAGTCTCAAAACTAGAAGAAGAGATTTAGCCCAGGCATTGATTAATCGAGGAGTCAATTTGGACCCAGTTGGCAAATGGAGCAAGGTTGGCCTTGTTATTTATAGTTCCACAGTACCTATTGGTGCAACGCCTGAGTATTTAGCTGGTCACTATATATTACAAGGTGCATCAAGTTTTTTACCAGTAATGGCATTAGCCCCTCAAGAAAATGAGAGAATATTAGATATGTGTGCTGCTCCAGGTGGGAAAGCGTCACATATAGCTGCTATAATGAAAAATACTGGTGCCTTATTTGCAAATGATGCAAACAAAGAAAGAACAAAAGCAGTTGTGGGAAATTTCCACAGATTGGGTGTAGTCAATGCTGTTATATGCAATTATGATGGTCGACAATTCCCTGAAGTTATTAAAGGGTTTGACAGGGTATTGCTTGACGCACCATGTACTGGTACTGGGGTAATTGCTAAAGATCCCAGTGTAAAGACTACGAAAGACCAGAAGGACATACAAAGGTGTTTTAATTTGCAGAGGCAGCTATTGTTAGCTGCAATTGATTGTTGTAATGCCAAATCAAGTACGGGCGGGTATATTGTGTACTCCACTTGTTCTATTTTACCTGAAGAAAATGAATGGGTTGTAAATTACGCATTGAAGAGACGAAATGTGAAATTGGTTCCCACAGGCCTTGATTTTGGAACTGAAGGTTTTATGAAATACAGGCATCATAGGTTCCATCCATCATTAAAATTGACTAGAAGATTTTATCCTCACACACATAATATGGATGGATTCTTTGTCGCTAAATTAAAGAAATTCTCCAATGTCATTCCTGAGGCAGTTATAGATGATGATGATAAGGAAACCGAAGGTGCAGATGAAGAAACAGTTGTCACAAACGAAGGAGATCAGTCTACAGATGCCATTTCTAATAATGTAACTTCCAAGGTCAGTGGCCCCCAGAAAAGAACTTTGGAGCCAGAGTCGAATATAGCTGAGCCACAAACAAAGAAAATGAAAGGTGAAAATGCAAAAAGTTCCACTGGAAACGCTGCGGTCAATAAGAAAAATAAAAATAAAAATAAGAAGGGACCTCAGTCACAGAACCTAAACAACTCAAATAGTAGAGTTCAGGGTAAAATGGGCAGTGCAGAAAAATTGCAAAACTCAAGAAAGCAGCAAGAACCCTCACTACATGGTCAAGGAAAGCAACATGAAAAGAAAAATAGTAAACTTGGTAAAAACAGAAAAGTAAATGGTCTGACTGAAAATAAAAATAAAAAGGCAAATGAAAACAAACCTAACAGTTCCAATCCAATGAAGACAACAAATAAAAAGCATAGTAAAATTAATAAAAATCACAGTAAAATCAAAAGAAAGGTTTGA
Protein
MGRKAKFDETKKVKKGPGRKAKKQPDPVFRKELLETEDQVKKLTHRQKQRAAKRAKKKAEIVEKRKAIKQGKKNEAKEIETNDEDIKKPVVKGYSDDNKEWLKPKQKVKQQKKQKDSDSDICDQDEGSEMEQDSEAESEHEEETKTVSEKYKVGTLDDLFKDSDEEEADPSSEEEGSVNSGNAGYNSDSSEEESDEDGDDEDMLPIEKANVKLKKKQKEEKKLADEEMQLNISKQDVFAFPSEEELQNPTSLQDVQQRIKDVVSVLTEFNRLKEEGRSRCEYTDLLLKDLCTYYSYNEFLMEVLMQIFPVQELVEFLEASEIARPVTIRTNSLKTRRRDLAQALINRGVNLDPVGKWSKVGLVIYSSTVPIGATPEYLAGHYILQGASSFLPVMALAPQENERILDMCAAPGGKASHIAAIMKNTGALFANDANKERTKAVVGNFHRLGVVNAVICNYDGRQFPEVIKGFDRVLLDAPCTGTGVIAKDPSVKTTKDQKDIQRCFNLQRQLLLAAIDCCNAKSSTGGYIVYSTCSILPEENEWVVNYALKRRNVKLVPTGLDFGTEGFMKYRHHRFHPSLKLTRRFYPHTHNMDGFFVAKLKKFSNVIPEAVIDDDDKETEGADEETVVTNEGDQSTDAISNNVTSKVSGPQKRTLEPESNIAEPQTKKMKGENAKSSTGNAAVNKKNKNKNKKGPQSQNLNNSNSRVQGKMGSAEKLQNSRKQQEPSLHGQGKQHEKKNSKLGKNRKVNGLTENKNKKANENKPNSSNPMKTTNKKHSKINKNHSKIKRKV
Summary
Similarity
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
Uniprot
EMBL
Proteomes
PRIDE
Interpro
SUPFAM
SSF53335
SSF53335
ProteinModelPortal
PDB
6EM5
E-value=2.85736e-130,
Score=1194
Ontologies
GO
Topology
Length:
791
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01765
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00107
outside
1 - 791
Population Genetic Test Statistics
Pi
229.529833
Theta
161.528714
Tajima's D
1.144157
CLR
0.002759
CSRT
0.699365031748413
Interpretation
Uncertain
