SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05611
Pre Gene Modal
BGIBMGA006568
Annotation
Uncharacterized_protein_OBRU01_09759_[Operophtera_brumata]
Full name
Coenzyme Q-binding protein COQ10 homolog A, mitochondrial      
Location in the cell
Extracellular   Reliability : 1.042 Mitochondrial   Reliability : 1.46
 

Sequence

CDS
ATGATTATCTCTCAAAGTTGTGCCGTAGGGCGATACATTTTTCGCAAGAAAAATGTAGTTTTCAGTTTTCAGGGTCATTACGTAAATAGACAAGGTAGTGCACTATGTCATTGCCAAGGCATTCAACAACAAAATCGTAGTTTTATAAACCTGCCAATAACAAACAAAACAAGAGTTTATACTGGAAGGCAACTTGTTGGCTACACAATGGAGCAAATGTTTGAAGTTGTATCAGATGTAGGAAGCTACAACAAATTCCTACCGTGGTGCAAAAAGTCTATAGTTTTGAAAGAAACACCAGGAAACCTGAAGGCGGACTTGATCATTGGCTTTCCTCCTATCAATGAAAGCTACACTTCAAATGTTACGCTAGTCAAACCACATTTGGTAAAAGCAGAGTGTTCTGATGGAAGACTCTTCCACCATATGTTGACCCTTTGGAGATTCAGTCCTGGTCTAAAAAGAGAACAGCAGTCGTGTGTTGTGGACTTCCAGATAACATTCGAATTTAGATCAGCTATACATTCACATTTATCTAATTTGTTTTTTGACCAAGTTGCTCGACAAATGGAAGGTGCTTTCATTAAAGAAGTCGGAAGGCGCAATGGGCCGGCAACAATGCAGCCTAGAAAGTTACTAATAAACAATCACACTTTGAAAACTTGA
Protein
MIISQSCAVGRYIFRKKNVVFSFQGHYVNRQGSALCHCQGIQQQNRSFINLPITNKTRVYTGRQLVGYTMEQMFEVVSDVGSYNKFLPWCKKSIVLKETPGNLKADLIIGFPPINESYTSNVTLVKPHLVKAECSDGRLFHHMLTLWRFSPGLKREQQSCVVDFQITFEFRSAIHSHLSNLFFDQVARQMEGAFIKEVGRRNGPATMQPRKLLINNHTLKT

Summary

Description
Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes (Probable).
Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes (By similarity).
Subunit
Interacts with coenzyme Q.
Similarity
Belongs to the COQ10 family.
Keywords
Alternative splicing   Complete proteome   Membrane   Mitochondrion   Mitochondrion inner membrane   Polymorphism   Reference proteome   Transit peptide  
Feature
chain  Coenzyme Q-binding protein COQ10 homolog A, mitochondrial
splice variant  In isoform 3.
sequence variant  In dbSNP:rs11543258.
EMBL
JTDY01001386    KOB74014.1    NWSH01000751    PCG74398.1    ODYU01009998    SOQ54783.1    + More
KQ461198    KPJ06175.1    KX778610    AON96655.1    AGBW02013342    OWR43566.1    KQ459606    KPI91582.1    DS232080    EDS34178.1    JXUM01073165    JXUM01073166    KQ562759    KXJ75180.1    CH477272    EAT45242.1    AXCN02000386    ATLV01024557    KE525352    KFB51626.1    GAPW01003430    JAC10168.1    AXCM01001984    AAAB01008807    EAA04466.4    APCN01000199    GGFM01007958    MBW28709.1    GGFJ01009311    MBW58452.1    GGFJ01009441    MBW58582.1    PYGN01000604    PSN43467.1    GGFK01011119    MBW44440.1    GGFK01011135    MBW44456.1    KQ435922    KOX68679.1    GGFL01002953    MBW67131.1    ADMH02000243    ETN67263.1    KZ288232    PBC31493.1    KQ981905    KYN33336.1    GDIQ01224216    JAK27509.1    KQ980903    KYN11598.1    GDIP01142962    JAL60752.1    KB547351    EMP31033.1    GDIP01145112    JAJ78290.1    GL887695    EGI70403.1    KQ976518    KYM82194.1    KY661329    AVA17416.1    ADTU01007401    AGCU01140800    AGCU01140801    KQ982576    KYQ54660.1    KQ414639    KOC66826.1    GDIQ01256976    JAJ94748.1    AEFK01210264    AFYH01001767    AFYH01001768    GL764539    EFZ17503.1    CH902619    KPU77287.1    EDV38132.1    KK852470    KDR23197.1    GAMT01010187    GAMS01003624    GAMR01002432    GAMQ01005084    GAMP01009817    JAB01674.1    JAB19512.1    JAB31500.1    JAB36767.1    JAB42938.1    PPHD01080082    POI20652.1    CH940648    EDW61654.1    KK107921    EZA47213.1    AABR07073270    CM001263    EHH20858.1    AACZ04012964    GABC01007033    GABF01004182    GABE01003224    NBAG03000092    JAA04305.1    JAA17963.1    JAA41515.1    PNI90180.1    NNAY01002718    OXU20697.1    KRF80125.1    AK057003    AK057014    BC002435    BC026922    BC047444    BC073923    AY358861    CABD030083604    AWGT02002303    OXB70206.1    KB030539    ELK15278.1    AAEX03006926    RAZU01000050    RLQ77557.1    CM004468    OCT95665.1    BC076834    MCFN01001117    OXB53646.1    KK733824    KFR00092.1    KC741055    AGM32879.1    ACTA01138067    ACTA01146066    AANG04003655    NDHI03003457    PNJ44793.1   
Pfam
PF03364   Polyketide_cyc
Interpro
IPR023393   START-like_dom_sf        + More
IPR005031   COQ10_START       
Gene 3D
PDB
1T17     E-value=1.81321e-05,     Score=112

Ontologies

Topology

Subcellular location
Mitochondrion inner membrane  
Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00141
Exp number, first 60 AAs:
0.000880000000000001
Total prob of N-in:
0.06734
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
292.861071
Theta
217.659136
Tajima's D
1.127078
CLR
0.000446
CSRT
0.687415629218539
Interpretation
Uncertain
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