Silkworm Genome Informatics Database

Gene

KWMTBOMO05608

Pre Gene Modal

BGIBMGA006769

Annotation

PREDICTED:_uncharacterized_protein_LOC105842218_[Bombyx_mori]

Location

Bomo_Chr10(+):6207485-6209439 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.17

CDS

ATGATGCGGCGGAAAGATCCGGCTCCGTCGCATACAGGCCGAGGCAAGAGCCTTATATCGATAAGAACAAATCAGCAGCAGCAGCGCAAGATACCACCATGCAGAAGTATGCTTCCAAGAAGCTATTCTACCCCGACTTCGCAAAATGAAACCGATCCTACACAGAACAGGGGGTACGTTATGAGAAGCTTCTCATCACCAGAACAAAAGCAAACAGACCGAAGAATGAATTCTGATTCATTTTATAGGCCTAAAGCCCTCGGCTCTAGGACCGAATTGGATTCAGACCTTGAGAACTTCGAACAGTTTGAAGATTGTTTCATTGATATTGACGCGGAAGATTCGATTGGTCAATACAAAAGCAGTCCTGAGAGAGACGAACCGAAAAAGGTAGTAGCCTCGCTGCTTCCCGGGAGCGGTCTACAAAAGATTTCCATGTTACCTATGAAGTCCGAAACAAGACAATCGCTGCAGAATACTCGAGACGCTATGAAGAAGTTATCGGGAAGGAGAAACCAAAGTGAAAGTCGACTAAATTTTCAACCATTGGTACTAAACGTTCCGACACGTCACGTAGTGTCGGATGATCGTTCTTCGTCTGATGTAGAAGAATTGCAGATATCACCGCAATATGATGTCGAGGCTGCCGACCTTGAACGAGAGCTGGACAATGCAGAGCACCATCTGGACAAAGAGATCGCCATTGCAACCGAAGAAAGCGACGCTGATACTGTAAGTTAA

Protein

MMRRKDPAPSHTGRGKSLISIRTNQQQQRKIPPCRSMLPRSYSTPTSQNETDPTQNRGYVMRSFSSPEQKQTDRRMNSDSFYRPKALGSRTELDSDLENFEQFEDCFIDIDAEDSIGQYKSSPERDEPKKVVASLLPGSGLQKISMLPMKSETRQSLQNTRDAMKKLSGRRNQSESRLNFQPLVLNVPTRHVVSDDRSSSDVEELQISPQYDVEAADLERELDNAEHHLDKEIAIATEESDADTVS

Uniprot

H9JB74 A0A2A4JZQ8 A0A2H1WRG4 A0A3S2NJB0 A0A0L7LPS8 A0A194PE96 + More
A0A194QRL7 A0A212EQ36 A0A1C9EGN4

Pubmed

19121390 26227816 26354079 22118469

EMBL

BABH01008717 NWSH01000351 PCG77134.1 ODYU01010439 SOQ55552.1 RSAL01000073 + More
RVE49008.1 JTDY01000435 KOB77181.1 KQ459606 KPI91587.1 KQ461198 KPJ06181.1 AGBW02013342 OWR43571.1 KX778610 AON96652.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000037510 UP000053268 UP000053240 + More
UP000007151

PRIDE

H9JB74

Pfam

PF07647 SAM_2 + More
PF13676 TIR_2

Interpro

IPR011989   ARM-like        + More
IPR035897   Toll_tir_struct_dom_sf
IPR013761   SAM/pointed_sf
IPR001660   SAM
IPR000157   TIR_dom
IPR039184   SARM1
IPR016024   ARM-type_fold

SUPFAM

SSF48371   SSF48371        + More
SSF52200   SSF52200
SSF47769   SSF47769

Gene 3D

1.10.150.50 1.25.10.10 3.40.50.10140

ProteinModelPortal

H9JB74 A0A2A4JZQ8 A0A2H1WRG4 A0A3S2NJB0 A0A0L7LPS8 A0A194PE96 + More
A0A194QRL7 A0A212EQ36 A0A1C9EGN4

KEGG

105842218 no KO assigned | (RefSeq) uncharacterized LOC105842218

GO

GO:0007165 GO:0035591 GO:0034128 GO:0048678

PANTHER

PTHR22998

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00018

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09280

outside

1 - 246

Pi

269.339613

Theta

187.884811

Tajima's D

1.341261

CLR

0

CSRT

0.751512424378781

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics