Gene
KWMTBOMO05585
Annotation
gag-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.879
Sequence
CDS
ATGGACGCTGTATTCGCGGAATTCCTCCGACTTCGCCACCCACAGCTCGCCTCAGAGTTTCTGGCCTTCAAGGCCGATCACACCGCGAGCCCTCTCGTGGACTCCGCCGAGCTCGCTGCTCCTGCGTCGCCTGTACCTGCGTGCAAAGCTTCTGCATCGAGCACCGCAGCCTCCGTCGTGCCTGCCGTTCCCGCGTCGCCTATACTGGCGAGTAAAACTGCTGCGTCGTCCGCCGTGGCCACCGTTCCAGCAGCGCGATCATCCACAGCCTCCGTCGTGCCCTCCAAAACACCTGCTCGTAGGTCACCTGCGCCCGCCTCCTCGTCCTCCGACTCTGACTCGGAGATGGAGGTTGACCTCGCTCCCGCCTCATCGACGGATGGATTCACCCTGGTACAAAAGGGTAAGAAGCGTGCCGCAGAGTCTCGAGCTCCCGCGGCCGCTAAAATTAGCAAAGCCGCGAACGCGTCGCGCCCCCGCCCTCAGACTCCCGTTGCGCCTCCAGCCCGTGCCACTCCGTCGCCGCGTCCGGTGGCACAAAATAAAACCCAGACCCCTCCCCCGGTTATCGTTCAAGAGAAGGCAGCTTGGGATCGAGTTTCTCTGGCCCTTAAGGCCAAAAATATCAACTTCACGAATGCCCGTAACCTCGCGAACGGCATTCAAATTAAGGTTCGAACACCCGACGACCATAGGGCCCTCTCTTCTTACCTCCGTAAGGAACGTATAAGTTTCCACACGTATACGCTCCAGGAGGAGCGCGAACTCCGTGCCGTCATACGTGGCATCCCTAAAGAGTTGGATGCCGAGCTAGTCAAGGCCGACCTTCTCGAACAAGGCCTACCGGTTAACTCCGTACACCGCATGCACACAGGTCGCGGAAGGGAGCCATATAACATGGTTCTCGTCGCCCTCCAGCCTACCCCCGAGGGTAAGCAAATATTCAACATCCGAACGGTCTGTAGCCTTTCCGGAATCGCCGTTGAAACCCCACACAAGAAAGGCACACCTAGCCAGTGCCATAACTGCCAATTATACGGGCATTCTTCCCGTAACTGTCACGCGCGCCCCCGATGCGTCAAGTGTTTAGGAGATCACGCCACGGCCCTCTGCACTCGCGATCAAAAAACCGCGACGGAACCGCCTAGCTGCGTCCTGTGTCGTACACAGGGTCACCCCGCAAATTACCGCGGATGCCCCCGAGCCCCGAAAATAAATCGCCGCGTCGCCCGCCAAAACCGCCTCCGAGCTTCCGGCCCAGACATCAAAGCCTCGGCACCCTCTGTGTCGCAGGCTAAGCCAGCGTTCGTTCCGGCGCCGGTGCCCAGTGTCTCGGCTTGGGCGAAACCGCTGCCGTACACGAACACGGTTACAACTCCCTCCTCCGCGATTCGTCCCGCCCCCGCAACTCGTCCCTCTCCCGCGACTTGCCCTCCGACCGCGTCCGACAATCTCGCTTTAGCGATCGACTTCTTTCAGTCGATCAACTTTGAGCGCGTTAACGCTTTGGGCGACGCCATTCGCGCTGCCTCCACTGCACAACACTTTATCGCCGTTGTGCAAGAATACGCCGACGTATACGCGTCATTAAATACGTACGTCCTCCCCTCACTCCGCCGGTAA
Protein
MDAVFAEFLRLRHPQLASEFLAFKADHTASPLVDSAELAAPASPVPACKASASSTAASVVPAVPASPILASKTAASSAVATVPAARSSTASVVPSKTPARRSPAPASSSSDSDSEMEVDLAPASSTDGFTLVQKGKKRAAESRAPAAAKISKAANASRPRPQTPVAPPARATPSPRPVAQNKTQTPPPVIVQEKAAWDRVSLALKAKNINFTNARNLANGIQIKVRTPDDHRALSSYLRKERISFHTYTLQEERELRAVIRGIPKELDAELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKQIFNIRTVCSLSGIAVETPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKPAFVPAPVPSVSAWAKPLPYTNTVTTPSSAIRPAPATRPSPATCPPTASDNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR
Summary
Pubmed
Pfam
PF07530 PRE_C2HC
Interpro
IPR006579
Pre_C2HC_dom
Ontologies
GO
Topology
Length:
540
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01476
Exp number, first 60 AAs:
0.00012
Total prob of N-in:
0.00059
outside
1 - 540
Population Genetic Test Statistics
Pi
0
Theta
0
Tajima's D
0
CLR
2.245172
CSRT
0
Interpretation
Uncertain
